Project measure / variable:   Peters2   PLT

ID, description, units MPD:6519   PLT   platelet count (PLT; units per volume x 103)   [n/µL]  
Data set, strains Peters2   AXB BXA   28 strains     sex: both     age: 11wks
Procedure complete blood count
Ontology mappings

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  STRAIN COMPARISON PLOT
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Peters2 - platelet count (PLT; units per volume x 103)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means920   n/µL 997   n/µL
Median of the strain means909   n/µL 998   n/µL
SD of the strain means± 122 ± 105
Coefficient of variation (CV)0.132 0.106
Min–max range of strain means757   –   1189   n/µL 751   –   1249   n/µL
Mean sample size per strain7.7   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 758483.9734 758483.9734 37.086 < 0.0001
strain 27 4173031.8439 154556.735 7.557 < 0.0001
sex:strain 27 1279946.7856 47405.4365 2.3179 0.0003
Residuals 393 8037642.8403 20452.0174


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
AXB10/PgnJ f 946.0 66.5   7 25.1 0.0703 849.0, 1040.0 0.21
AXB10/PgnJ m 1079.0 96.0   8 33.9 0.0889 966.0, 1259.0 0.78
AXB12/PgnJ f 824.0 152.0   10 48.1 0.185 601.0, 1133.0 -0.79
AXB12/PgnJ m 871.0 225.0   8 79.7 0.259 443.0, 1219.0 -1.2
AXB13/PgnJ f 1038.0 49.3   8 17.4 0.0475 942.0, 1099.0 0.97
AXB13/PgnJ m 1066.0 92.7   8 32.8 0.087 915.0, 1245.0 0.65
AXB15/PgnJ f 995.0 81.7   8 28.9 0.0821 913.0, 1100.0 0.62
AXB15/PgnJ m 1070.0 90.8   8 32.1 0.0849 972.0, 1212.0 0.69
AXB19a/PgnJ f 776.0 79.9   8 28.2 0.103 710.0, 962.0 -1.18
AXB19a/PgnJ m 915.0 109.0   8 38.4 0.119 755.0, 1058.0 -0.78
AXB19b/PgnJ f 921.0 180.0   7 68.2 0.196 653.0, 1168.0 0.01
AXB19b/PgnJ m 1032.0 194.0   8 68.5 0.188 630.0, 1303.0 0.33
AXB19/PgnJ f 936.0 29.2   8 10.3 0.0312 888.0, 974.0 0.13
AXB19/PgnJ m 955.0 105.0   8 37.2 0.11 819.0, 1116.0 -0.4
AXB1/PgnJ f 810.0 80.3   5 35.9 0.0991 741.0, 920.0 -0.9
AXB1/PgnJ m 950.0 216.0   8 76.2 0.227 490.0, 1167.0 -0.45
AXB23/PgnJ f 757.0 124.0   5 55.3 0.163 620.0, 905.0 -1.34
AXB23/PgnJ m 902.0 107.0   7 40.6 0.119 752.0, 1060.0 -0.9
AXB24/PgnJ f 821.0 180.0   8 63.6 0.219 625.0, 1129.0 -0.81
AXB24/PgnJ m 1143.0 100.0   8 35.5 0.0879 1000.0, 1259.0 1.38
AXB2/PgnJ f 900.0 69.1   8 24.4 0.0768 810.0, 987.0 -0.16
AXB2/PgnJ m 1027.0 147.0   8 52.0 0.143 759.0, 1288.0 0.28
AXB4/PgnJ f 1139.0 105.0   6 42.7 0.0918 1014.0, 1283.0 1.8
AXB4/PgnJ m 961.0 230.0   9 76.7 0.239 572.0, 1285.0 -0.34
AXB5/PgnJ f 767.0 26.3   7 9.96 0.0344 731.0, 801.0 -1.26
AXB5/PgnJ m 1040.0 195.0   7 73.7 0.188 773.0, 1381.0 0.41
AXB6/PgnJ f 926.0 142.0   7 53.8 0.154 676.0, 1099.0 0.05
AXB6/PgnJ m 966.0 94.7   6 38.6 0.098 867.0, 1114.0 -0.3
AXB8/PgnJ f 918.0 133.0   7 50.4 0.145 753.0, 1178.0 -0.02
AXB8/PgnJ m 1171.0 121.0   8 42.9 0.104 982.0, 1366.0 1.65
BXA11/PgnJ f 816.0 82.1   8 29.0 0.101 694.0, 947.0 -0.86
BXA11/PgnJ m 884.0 150.0   8 52.9 0.169 589.0, 1071.0 -1.07
BXA12/PgnJ f 1071.0 93.7   8 33.1 0.0875 966.0, 1264.0 1.24
BXA12/PgnJ m 1071.0 90.1   8 31.9 0.0841 927.0, 1159.0 0.7
BXA13/PgnJ f 791.0 170.0   8 60.3 0.215 534.0, 1044.0 -1.06
BXA13/PgnJ m 751.0 85.3   8 30.2 0.114 661.0, 914.0 -2.34
BXA14/PgnJ f 780.0 121.0   8 42.7 0.155 655.0, 1025.0 -1.15
BXA14/PgnJ m 972.0 120.0   8 42.4 0.123 806.0, 1138.0 -0.24
BXA16/PgnJ f 873.0 184.0   8 65.0 0.21 642.0, 1197.0 -0.39
BXA16/PgnJ m 1034.0 89.2   8 31.5 0.0862 892.0, 1141.0 0.35
BXA1/PgnJ f 894.0 207.0   8 73.2 0.231 687.0, 1331.0 -0.21
BXA1/PgnJ m 845.0 145.0   6 59.3 0.172 664.0, 1055.0 -1.44
BXA24/PgnJ f 1000.0 159.0   8 56.2 0.159 800.0, 1307.0 0.66
BXA24/PgnJ m 1011.0 136.0   8 48.1 0.134 827.0, 1189.0 0.13
BXA25/PgnJ f 1006.0 156.0   8 55.3 0.155 686.0, 1198.0 0.71
BXA25/PgnJ m 1047.0 86.7   8 30.7 0.0828 923.0, 1167.0 0.47
BXA26/PgnJ f 828.0 144.0   9 48.2 0.175 619.0, 1115.0 -0.76
BXA26/PgnJ m 875.0 249.0   7 94.2 0.285 623.0, 1381.0 -1.16
BXA2/PgnJ f 1189.0 200.0   8 70.7 0.168 847.0, 1392.0 2.21
BXA2/PgnJ m 1249.0 202.0   10 64.0 0.162 782.0, 1434.0 2.39
BXA4/PgnJ f 1046.0 131.0   8 46.3 0.125 897.0, 1286.0 1.04
BXA4/PgnJ m 1063.0 183.0   8 64.7 0.172 799.0, 1379.0 0.62
BXA7/PgnJ f 1126.0 88.4   8 31.3 0.0785 954.0, 1224.0 1.69
BXA7/PgnJ m 986.0 139.0   8 49.3 0.141 732.0, 1151.0 -0.11
BXA8/PgnJ f 867.0 126.0   16 31.6 0.146 657.0, 1168.0 -0.44
BXA8/PgnJ m 986.0 190.0   15 48.9 0.192 758.0, 1346.0 -0.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ f 945.8571 54.0529 1052.1262 839.5881
AXB10/PgnJ m 1079.375 50.5619 1178.7806 979.9694
AXB12/PgnJ f 823.5 45.2239 912.411 734.589
AXB12/PgnJ m 871.25 50.5619 970.6556 771.8444
AXB13/PgnJ f 1037.5 50.5619 1136.9056 938.0944
AXB13/PgnJ m 1066.125 50.5619 1165.5306 966.7194
AXB15/PgnJ f 994.875 50.5619 1094.2806 895.4694
AXB15/PgnJ m 1070.0 50.5619 1169.4056 970.5944
AXB19a/PgnJ f 776.125 50.5619 875.5306 676.7194
AXB19a/PgnJ m 914.875 50.5619 1014.2806 815.4694
AXB19b/PgnJ f 921.1429 54.0529 1027.4119 814.8738
AXB19b/PgnJ m 1031.875 50.5619 1131.2806 932.4694
AXB19/PgnJ f 936.0 50.5619 1035.4056 836.5944
AXB19/PgnJ m 954.875 50.5619 1054.2806 855.4694
AXB1/PgnJ f 810.4 63.9563 936.1392 684.6608
AXB1/PgnJ m 949.875 50.5619 1049.2806 850.4694
AXB23/PgnJ f 757.0 63.9563 882.7392 631.2608
AXB23/PgnJ m 901.7143 54.0529 1007.9833 795.4453
AXB24/PgnJ f 820.625 50.5619 920.0306 721.2194
AXB24/PgnJ m 1142.625 50.5619 1242.0306 1043.2194
AXB2/PgnJ f 899.75 50.5619 999.1556 800.3444
AXB2/PgnJ m 1026.75 50.5619 1126.1556 927.3444
AXB4/PgnJ f 1138.8333 58.3838 1253.617 1024.0497
AXB4/PgnJ m 960.7778 47.6702 1054.4982 867.0573
AXB5/PgnJ f 766.7143 54.0529 872.9833 660.4453
AXB5/PgnJ m 1039.5714 54.0529 1145.8405 933.3024
AXB6/PgnJ f 925.8571 54.0529 1032.1262 819.5881
AXB6/PgnJ m 966.1667 58.3838 1080.9503 851.383
AXB8/PgnJ f 917.7143 54.0529 1023.9833 811.4453
AXB8/PgnJ m 1171.25 50.5619 1270.6556 1071.8444
BXA11/PgnJ f 815.875 50.5619 915.2806 716.4694
BXA11/PgnJ m 884.375 50.5619 983.7806 784.9694
BXA12/PgnJ f 1070.625 50.5619 1170.0306 971.2194
BXA12/PgnJ m 1071.125 50.5619 1170.5306 971.7194
BXA13/PgnJ f 791.375 50.5619 890.7806 691.9694
BXA13/PgnJ m 750.625 50.5619 850.0306 651.2194
BXA14/PgnJ f 780.375 50.5619 879.7806 680.9694
BXA14/PgnJ m 972.25 50.5619 1071.6556 872.8444
BXA16/PgnJ f 873.25 50.5619 972.6556 773.8444
BXA16/PgnJ m 1033.75 50.5619 1133.1556 934.3444
BXA1/PgnJ f 894.5 50.5619 993.9056 795.0944
BXA1/PgnJ m 845.0 58.3838 959.7837 730.2163
BXA24/PgnJ f 999.75 50.5619 1099.1556 900.3444
BXA24/PgnJ m 1011.125 50.5619 1110.5306 911.7194
BXA25/PgnJ f 1006.0 50.5619 1105.4056 906.5944
BXA25/PgnJ m 1046.625 50.5619 1146.0306 947.2194
BXA26/PgnJ f 827.5556 47.6702 921.276 733.8351
BXA26/PgnJ m 874.7143 54.0529 980.9833 768.4453
BXA2/PgnJ f 1189.125 50.5619 1288.5306 1089.7194
BXA2/PgnJ m 1248.9 45.2239 1337.811 1159.989
BXA4/PgnJ f 1045.875 50.5619 1145.2806 946.4694
BXA4/PgnJ m 1062.625 50.5619 1162.0306 963.2194
BXA7/PgnJ f 1125.5 50.5619 1224.9056 1026.0944
BXA7/PgnJ m 986.125 50.5619 1085.5306 886.7194
BXA8/PgnJ f 866.9375 35.7526 937.2279 796.6471
BXA8/PgnJ m 985.5333 36.9252 1058.1289 912.9378


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ both 1012.6161 37.0075 1085.3735 939.8586
AXB12/PgnJ both 847.375 33.9179 914.0583 780.6917
AXB13/PgnJ both 1051.8125 35.7526 1122.1029 981.5221
AXB15/PgnJ both 1032.4375 35.7526 1102.7279 962.1471
AXB19a/PgnJ both 845.5 35.7526 915.7904 775.2096
AXB19b/PgnJ both 976.5089 37.0075 1049.2664 903.7515
AXB19/PgnJ both 945.4375 35.7526 1015.7279 875.1471
AXB1/PgnJ both 880.1375 40.7643 960.2808 799.9942
AXB23/PgnJ both 829.3571 41.8692 911.6728 747.0415
AXB24/PgnJ both 981.625 35.7526 1051.9154 911.3346
AXB2/PgnJ both 963.25 35.7526 1033.5404 892.9596
AXB4/PgnJ both 1049.8056 37.6866 1123.8981 975.713
AXB5/PgnJ both 903.1429 38.2212 978.2864 827.9993
AXB6/PgnJ both 946.0119 39.7819 1024.2238 867.8
AXB8/PgnJ both 1044.4821 37.0075 1117.2396 971.7247
BXA11/PgnJ both 850.125 35.7526 920.4154 779.8346
BXA12/PgnJ both 1070.875 35.7526 1141.1654 1000.5846
BXA13/PgnJ both 771.0 35.7526 841.2904 700.7096
BXA14/PgnJ both 876.3125 35.7526 946.6029 806.0221
BXA16/PgnJ both 953.5 35.7526 1023.7904 883.2096
BXA1/PgnJ both 869.75 38.6173 945.6723 793.8277
BXA24/PgnJ both 1005.4375 35.7526 1075.7279 935.1471
BXA25/PgnJ both 1026.3125 35.7526 1096.6029 956.0221
BXA26/PgnJ both 851.1349 36.0353 921.9809 780.2889
BXA2/PgnJ both 1219.0125 33.9179 1285.6958 1152.3292
BXA4/PgnJ both 1054.25 35.7526 1124.5404 983.9596
BXA7/PgnJ both 1055.8125 35.7526 1126.1029 985.5221
BXA8/PgnJ both 926.2354 25.6988 976.7598 875.711




  GWAS USING LINEAR MIXED MODELS