Project measure / variable:   Peters2   LUC

ID, description, units MPD:6515   LUC   large unstained cell differential (percent of total WBC)   [%]  
Data set, strains Peters2   AXB BXA   28 strains     sex: both     age: 11wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters2 - large unstained cell differential (percent of total WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means0.470   % 0.589   %
Median of the strain means0.444   % 0.538   %
SD of the strain means± 0.164 ± 0.201
Coefficient of variation (CV)0.350 0.342
Min–max range of strain means0.229   –   1.06   % 0.325   –   1.02   %
Mean sample size per strain7.7   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.6405 1.6405 37.4986 < 0.0001
strain 27 11.7609 0.4356 9.9566 < 0.0001
sex:strain 27 2.4871 0.0921 2.1055 0.0012
Residuals 393 17.1932 0.0437


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
AXB10/PgnJ f 0.271 0.0488   7 0.0184 0.18 0.2, 0.3 -1.21
AXB10/PgnJ m 0.5 0.185   8 0.0655 0.37 0.2, 0.8 -0.44
AXB12/PgnJ f 0.38 0.21   10 0.0663 0.552 -0.55
AXB12/PgnJ m 0.575 0.167   8 0.059 0.29 0.3, 0.9 -0.07
AXB13/PgnJ f 1.06 0.354   8 0.125 0.333 0.4, 1.5 3.59
AXB13/PgnJ m 0.9 0.227   8 0.0802 0.252 0.6, 1.3 1.55
AXB15/PgnJ f 0.487 0.0991   8 0.035 0.203 0.4, 0.6 0.1
AXB15/PgnJ m 0.4 0.151   8 0.0535 0.378 0.2, 0.6 -0.94
AXB19a/PgnJ f 0.75 0.177   8 0.0627 0.236 0.6, 1.1 1.71
AXB19a/PgnJ m 0.95 0.493   8 0.174 0.519 0.3, 1.8 1.8
AXB19b/PgnJ f 0.514 0.186   7 0.0705 0.363 0.3, 0.7 0.27
AXB19b/PgnJ m 0.625 0.238   8 0.084 0.38 0.3, 1.0 0.18
AXB19/PgnJ f 0.638 0.233   8 0.0822 0.365 0.4, 1.1 1.02
AXB19/PgnJ m 0.662 0.2   8 0.0706 0.301 0.4, 1.0 0.36
AXB1/PgnJ f 0.56 0.241   5 0.108 0.43 0.3, 0.9 0.55
AXB1/PgnJ m 1.02 0.459   8 0.162 0.448 0.6, 1.9 2.15
AXB23/PgnJ f 0.48 0.192   5 0.086 0.401 0.2, 0.7 0.06
AXB23/PgnJ m 0.443 0.23   7 0.0869 0.519 0.2, 0.9 -0.72
AXB24/PgnJ f 0.412 0.0835   8 0.0295 0.202 0.3, 0.5 -0.35
AXB24/PgnJ m 0.588 0.164   8 0.0581 0.28 0.3, 0.8 0.0
AXB2/PgnJ f 0.35 0.12   8 0.0423 0.341 0.2, 0.5 -0.73
AXB2/PgnJ m 0.437 0.151   8 0.0532 0.344 0.3, 0.7 -0.75
AXB4/PgnJ f 0.617 0.286   6 0.117 0.463 0.3, 1.1 0.9
AXB4/PgnJ m 0.511 0.237   9 0.079 0.463 0.2, 0.9 -0.39
AXB5/PgnJ f 0.243 0.0535   7 0.0202 0.22 0.2, 0.3 -1.38
AXB5/PgnJ m 0.329 0.125   7 0.0474 0.382 0.1, 0.5 -1.29
AXB6/PgnJ f 0.343 0.113   7 0.0429 0.331 0.2, 0.5 -0.77
AXB6/PgnJ m 0.8 0.522   6 0.213 0.652 0.3, 1.4 1.05
AXB8/PgnJ f 0.229 0.15   7 0.0565 0.655 -1.47
AXB8/PgnJ m 0.325 0.116   8 0.0412 0.358 0.1, 0.5 -1.31
BXA11/PgnJ f 0.437 0.16   8 0.0565 0.365 0.3, 0.8 -0.2
BXA11/PgnJ m 0.488 0.314   8 0.111 0.643 0.2, 1.2 -0.5
BXA12/PgnJ f 0.55 0.12   8 0.0423 0.217 0.4, 0.7 0.49
BXA12/PgnJ m 0.862 0.16   8 0.0565 0.185 0.7, 1.1 1.36
BXA13/PgnJ f 0.425 0.139   8 0.0491 0.327 0.3, 0.6 -0.27
BXA13/PgnJ m 0.662 0.256   8 0.0905 0.386 0.3, 1.0 0.36
BXA14/PgnJ f 0.525 0.149   8 0.0526 0.283 0.4, 0.8 0.34
BXA14/PgnJ m 0.912 0.439   8 0.155 0.481 0.2, 1.6 1.61
BXA16/PgnJ f 0.362 0.13   8 0.046 0.359 0.2, 0.5 -0.66
BXA16/PgnJ m 0.362 0.106   8 0.0375 0.293 0.3, 0.6 -1.13
BXA1/PgnJ f 0.475 0.183   8 0.0648 0.386 0.1, 0.7 0.03
BXA1/PgnJ m 0.55 0.138   6 0.0563 0.251 0.4, 0.8 -0.19
BXA24/PgnJ f 0.387 0.217   8 0.0766 0.559 0.2, 0.8 -0.5
BXA24/PgnJ m 0.412 0.0835   8 0.0295 0.202 0.3, 0.5 -0.88
BXA25/PgnJ f 0.4 0.12   8 0.0423 0.299 0.3, 0.6 -0.42
BXA25/PgnJ m 0.362 0.106   8 0.0375 0.293 0.2, 0.5 -1.13
BXA26/PgnJ f 0.422 0.109   9 0.0364 0.259 0.2, 0.5 -0.29
BXA26/PgnJ m 0.4 0.208   7 0.0787 0.52 0.1, 0.7 -0.94
BXA2/PgnJ f 0.5 0.16   8 0.0567 0.321 0.2, 0.7 0.18
BXA2/PgnJ m 0.73 0.206   10 0.0651 0.282 0.5, 1.2 0.7
BXA4/PgnJ f 0.375 0.0707   8 0.025 0.189 0.3, 0.5 -0.58
BXA4/PgnJ m 0.525 0.104   8 0.0366 0.197 0.4, 0.7 -0.32
BXA7/PgnJ f 0.45 0.141   8 0.05 0.314 0.3, 0.6 -0.12
BXA7/PgnJ m 0.525 0.104   8 0.0366 0.197 0.4, 0.6 -0.32
BXA8/PgnJ f 0.512 0.163   16 0.0407 0.318 0.3, 1.0 0.26
BXA8/PgnJ m 0.627 0.175   15 0.0452 0.279 0.2, 1.0 0.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ f 0.2714 0.0791 0.4269 0.116
AXB10/PgnJ m 0.5 0.0739 0.6454 0.3546
AXB12/PgnJ f 0.38 0.0661 0.51 0.25
AXB12/PgnJ m 0.575 0.0739 0.7204 0.4296
AXB13/PgnJ f 1.0625 0.0739 1.2079 0.9171
AXB13/PgnJ m 0.9 0.0739 1.0454 0.7546
AXB15/PgnJ f 0.4875 0.0739 0.6329 0.3421
AXB15/PgnJ m 0.4 0.0739 0.5454 0.2546
AXB19a/PgnJ f 0.75 0.0739 0.8954 0.6046
AXB19a/PgnJ m 0.95 0.0739 1.0954 0.8046
AXB19b/PgnJ f 0.5143 0.0791 0.6697 0.3589
AXB19b/PgnJ m 0.625 0.0739 0.7704 0.4796
AXB19/PgnJ f 0.6375 0.0739 0.7829 0.4921
AXB19/PgnJ m 0.6625 0.0739 0.8079 0.5171
AXB1/PgnJ f 0.56 0.0935 0.7439 0.3761
AXB1/PgnJ m 1.025 0.0739 1.1704 0.8796
AXB23/PgnJ f 0.48 0.0935 0.6639 0.2961
AXB23/PgnJ m 0.4429 0.0791 0.5983 0.2874
AXB24/PgnJ f 0.4125 0.0739 0.5579 0.2671
AXB24/PgnJ m 0.5875 0.0739 0.7329 0.4421
AXB2/PgnJ f 0.35 0.0739 0.4954 0.2046
AXB2/PgnJ m 0.4375 0.0739 0.5829 0.2921
AXB4/PgnJ f 0.6167 0.0854 0.7845 0.4488
AXB4/PgnJ m 0.5111 0.0697 0.6482 0.374
AXB5/PgnJ f 0.2429 0.0791 0.3983 0.0874
AXB5/PgnJ m 0.3286 0.0791 0.484 0.1731
AXB6/PgnJ f 0.3429 0.0791 0.4983 0.1874
AXB6/PgnJ m 0.8 0.0854 0.9679 0.6321
AXB8/PgnJ f 0.2286 0.0791 0.384 0.0731
AXB8/PgnJ m 0.325 0.0739 0.4704 0.1796
BXA11/PgnJ f 0.4375 0.0739 0.5829 0.2921
BXA11/PgnJ m 0.4875 0.0739 0.6329 0.3421
BXA12/PgnJ f 0.55 0.0739 0.6954 0.4046
BXA12/PgnJ m 0.8625 0.0739 1.0079 0.7171
BXA13/PgnJ f 0.425 0.0739 0.5704 0.2796
BXA13/PgnJ m 0.6625 0.0739 0.8079 0.5171
BXA14/PgnJ f 0.525 0.0739 0.6704 0.3796
BXA14/PgnJ m 0.9125 0.0739 1.0579 0.7671
BXA16/PgnJ f 0.3625 0.0739 0.5079 0.2171
BXA16/PgnJ m 0.3625 0.0739 0.5079 0.2171
BXA1/PgnJ f 0.475 0.0739 0.6204 0.3296
BXA1/PgnJ m 0.55 0.0854 0.7179 0.3821
BXA24/PgnJ f 0.3875 0.0739 0.5329 0.2421
BXA24/PgnJ m 0.4125 0.0739 0.5579 0.2671
BXA25/PgnJ f 0.4 0.0739 0.5454 0.2546
BXA25/PgnJ m 0.3625 0.0739 0.5079 0.2171
BXA26/PgnJ f 0.4222 0.0697 0.5593 0.2852
BXA26/PgnJ m 0.4 0.0791 0.5554 0.2446
BXA2/PgnJ f 0.5 0.0739 0.6454 0.3546
BXA2/PgnJ m 0.73 0.0661 0.86 0.6
BXA4/PgnJ f 0.375 0.0739 0.5204 0.2296
BXA4/PgnJ m 0.525 0.0739 0.6704 0.3796
BXA7/PgnJ f 0.45 0.0739 0.5954 0.3046
BXA7/PgnJ m 0.525 0.0739 0.6704 0.3796
BXA8/PgnJ f 0.5125 0.0523 0.6153 0.4097
BXA8/PgnJ m 0.6267 0.054 0.7328 0.5205


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ both 0.3857 0.0541 0.4921 0.2793
AXB12/PgnJ both 0.4775 0.0496 0.575 0.38
AXB13/PgnJ both 0.9813 0.0523 1.0841 0.8784
AXB15/PgnJ both 0.4437 0.0523 0.5466 0.3409
AXB19a/PgnJ both 0.85 0.0523 0.9528 0.7472
AXB19b/PgnJ both 0.5696 0.0541 0.6761 0.4632
AXB19/PgnJ both 0.65 0.0523 0.7528 0.5472
AXB1/PgnJ both 0.7925 0.0596 0.9097 0.6753
AXB23/PgnJ both 0.4614 0.0612 0.5818 0.341
AXB24/PgnJ both 0.5 0.0523 0.6028 0.3972
AXB2/PgnJ both 0.3937 0.0523 0.4966 0.2909
AXB4/PgnJ both 0.5639 0.0551 0.6723 0.4555
AXB5/PgnJ both 0.2857 0.0559 0.3956 0.1758
AXB6/PgnJ both 0.5714 0.0582 0.6858 0.457
AXB8/PgnJ both 0.2768 0.0541 0.3832 0.1704
BXA11/PgnJ both 0.4625 0.0523 0.5653 0.3597
BXA12/PgnJ both 0.7062 0.0523 0.8091 0.6034
BXA13/PgnJ both 0.5437 0.0523 0.6466 0.4409
BXA14/PgnJ both 0.7187 0.0523 0.8216 0.6159
BXA16/PgnJ both 0.3625 0.0523 0.4653 0.2597
BXA1/PgnJ both 0.5125 0.0565 0.6235 0.4015
BXA24/PgnJ both 0.4 0.0523 0.5028 0.2972
BXA25/PgnJ both 0.3812 0.0523 0.4841 0.2784
BXA26/PgnJ both 0.4111 0.0527 0.5147 0.3075
BXA2/PgnJ both 0.615 0.0496 0.7125 0.5175
BXA4/PgnJ both 0.45 0.0523 0.5528 0.3472
BXA7/PgnJ both 0.4875 0.0523 0.5903 0.3847
BXA8/PgnJ both 0.5696 0.0376 0.6435 0.4957




  GWAS USING LINEAR MIXED MODELS