Phenotype measure:   Peters2   LYM

ID, description, units MPD:6512   LYM   lymphocyte differential (percent of total WBC)   [%]
Data set, strains Peters2   AXB BXA   28 strains     sex: both     age: 11wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Peters2 - lymphocyte differential (percent of total WBC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means86.2   % 84.7   %
Median of the strain means86.6   % 85.0   %
SD of the strain means± 2.52 ± 3.66
Coefficient of variation (CV)0.0292 0.0432
Min–max range of strain means80.5   –   89.9   % 72.5   –   90.9   %
Mean sample size per strain7.7   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 298.4807 298.4807 28.1123 < 0.0001
strain 27 3131.9095 115.9966 10.9251 < 0.0001
sex:strain 27 1055.0762 39.0769 3.6804 < 0.0001
Residuals 392 4162.0343 10.6174


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
AXB10/PgnJ f 84.4 1.83   7 0.69 0.0216 81.1, 86.0 -0.73
AXB10/PgnJ m 85.4 1.22   8 0.43 0.0142 83.8, 86.9 0.19
AXB12/PgnJ f 83.2 2.01   9 0.669 0.0241 80.4, 86.4 -1.2
AXB12/PgnJ m 84.9 2.45   8 0.865 0.0288 80.0, 87.7 0.06
AXB13/PgnJ f 89.6 1.7   8 0.599 0.0189 86.9, 91.6 1.34
AXB13/PgnJ m 84.6 7.25   8 2.56 0.0857 72.3, 91.2 -0.03
AXB15/PgnJ f 87.8 3.2   8 1.13 0.0364 81.1, 90.9 0.62
AXB15/PgnJ m 88.5 2.69   8 0.95 0.0304 83.6, 91.8 1.04
AXB19a/PgnJ f 88.3 1.75   8 0.618 0.0198 86.0, 90.8 0.82
AXB19a/PgnJ m 86.9 4.4   8 1.56 0.0507 76.8, 91.8 0.6
AXB19b/PgnJ f 86.2 2.21   7 0.835 0.0256 82.8, 89.5 -0.01
AXB19b/PgnJ m 83.9 3.08   8 1.09 0.0367 79.3, 87.1 -0.22
AXB19/PgnJ f 88.6 1.29   8 0.457 0.0146 86.7, 90.4 0.94
AXB19/PgnJ m 87.9 1.28   8 0.453 0.0146 86.0, 89.4 0.88
AXB1/PgnJ f 85.7 5.15   5 2.3 0.0601 76.8, 90.2 -0.21
AXB1/PgnJ m 84.8 3.02   8 1.07 0.0356 80.1, 87.5 0.03
AXB23/PgnJ f 87.0 3.14   5 1.41 0.0362 83.2, 90.6 0.3
AXB23/PgnJ m 86.2 2.56   7 0.967 0.0297 82.7, 90.1 0.41
AXB24/PgnJ f 87.0 1.07   8 0.379 0.0123 85.2, 88.5 0.3
AXB24/PgnJ m 84.8 5.37   8 1.9 0.0634 72.3, 89.1 0.03
AXB2/PgnJ f 89.5 1.12   8 0.395 0.0125 87.4, 90.9 1.3
AXB2/PgnJ m 90.9 1.32   8 0.466 0.0145 88.7, 92.5 1.69
AXB4/PgnJ f 82.6 3.23   6 1.32 0.0391 77.2, 85.6 -1.44
AXB4/PgnJ m 83.7 1.93   9 0.644 0.0231 81.0, 86.4 -0.27
AXB5/PgnJ f 82.2 2.4   7 0.908 0.0292 77.5, 84.4 -1.6
AXB5/PgnJ m 84.6 1.93   7 0.728 0.0228 82.6, 87.7 -0.03
AXB6/PgnJ f 88.7 0.847   7 0.32 0.00955 87.4, 89.7 0.98
AXB6/PgnJ m 85.0 2.63   6 1.08 0.031 81.5, 88.3 0.08
AXB8/PgnJ f 80.5 4.18   7 1.58 0.0519 71.9, 84.9 -2.27
AXB8/PgnJ m 78.1 3.58   8 1.27 0.0459 72.4, 83.6 -1.8
BXA11/PgnJ f 87.6 2.77   8 0.981 0.0317 82.6, 91.3 0.54
BXA11/PgnJ m 86.6 2.92   8 1.03 0.0337 80.6, 89.0 0.52
BXA12/PgnJ f 87.4 2.24   8 0.793 0.0257 82.5, 89.7 0.46
BXA12/PgnJ m 86.5 1.95   8 0.688 0.0225 83.5, 89.2 0.49
BXA13/PgnJ f 84.3 4.31   8 1.53 0.0512 78.8, 89.4 -0.77
BXA13/PgnJ m 80.1 5.08   8 1.8 0.0634 69.6, 84.3 -1.26
BXA14/PgnJ f 85.4 2.3   8 0.812 0.0269 83.3, 90.0 -0.33
BXA14/PgnJ m 72.5 6.48   8 2.29 0.0893 66.1, 86.2 -3.33
BXA16/PgnJ f 88.3 1.5   8 0.53 0.017 85.6, 89.6 0.82
BXA16/PgnJ m 89.1 0.763   8 0.27 0.00856 88.4, 90.6 1.2
BXA1/PgnJ f 88.3 2.11   8 0.747 0.0239 83.5, 90.2 0.82
BXA1/PgnJ m 87.7 0.677   6 0.276 0.00772 86.8, 88.6 0.82
BXA24/PgnJ f 82.6 3.26   8 1.15 0.0394 77.8, 87.5 -1.44
BXA24/PgnJ m 84.3 4.45   8 1.57 0.0528 74.2, 89.1 -0.11
BXA25/PgnJ f 85.3 2.01   8 0.711 0.0236 81.9, 88.1 -0.37
BXA25/PgnJ m 83.2 2.26   8 0.799 0.0272 80.2, 87.1 -0.41
BXA26/PgnJ f 89.9 2.47   9 0.825 0.0275 85.8, 93.1 1.45
BXA26/PgnJ m 86.0 3.41   7 1.29 0.0396 79.9, 89.8 0.36
BXA2/PgnJ f 84.5 7.19   8 2.54 0.085 70.0, 90.2 -0.69
BXA2/PgnJ m 85.6 2.34   10 0.739 0.0273 80.7, 88.9 0.25
BXA4/PgnJ f 85.7 3.16   8 1.12 0.0369 79.4, 90.6 -0.21
BXA4/PgnJ m 79.0 6.7   8 2.37 0.0848 65.8, 85.0 -1.56
BXA7/PgnJ f 88.8 2.53   8 0.895 0.0285 82.9, 91.6 1.02
BXA7/PgnJ m 86.4 1.99   8 0.705 0.0231 83.6, 89.1 0.47
BXA8/PgnJ f 85.1 2.25   16 0.563 0.0265 81.0, 88.8 -0.45
BXA8/PgnJ m 84.3 3.88   15 1.0 0.046 71.2, 87.7 -0.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ f 84.4286 1.2316 86.8499 82.0073
AXB10/PgnJ m 85.4 1.152 87.6649 83.1351
AXB12/PgnJ f 83.2333 1.0861 85.3687 81.0979
AXB12/PgnJ m 84.9125 1.152 87.1774 82.6476
AXB13/PgnJ f 89.625 1.152 91.8899 87.3601
AXB13/PgnJ m 84.625 1.152 86.8899 82.3601
AXB15/PgnJ f 87.8125 1.152 90.0774 85.5476
AXB15/PgnJ m 88.4625 1.152 90.7274 86.1976
AXB19a/PgnJ f 88.2625 1.152 90.5274 85.9976
AXB19a/PgnJ m 86.925 1.152 89.1899 84.6601
AXB19b/PgnJ f 86.2143 1.2316 88.6356 83.793
AXB19b/PgnJ m 83.925 1.152 86.1899 81.6601
AXB19/PgnJ f 88.55 1.152 90.8149 86.2851
AXB19/PgnJ m 87.925 1.152 90.1899 85.6601
AXB1/PgnJ f 85.7 1.4572 88.5649 82.8351
AXB1/PgnJ m 84.75 1.152 87.0149 82.4851
AXB23/PgnJ f 86.96 1.4572 89.8249 84.0951
AXB23/PgnJ m 86.1714 1.2316 88.5927 83.7501
AXB24/PgnJ f 86.9625 1.152 89.2274 84.6976
AXB24/PgnJ m 84.75 1.152 87.0149 82.4851
AXB2/PgnJ f 89.525 1.152 91.7899 87.2601
AXB2/PgnJ m 90.9 1.152 93.1649 88.6351
AXB4/PgnJ f 82.5667 1.3303 85.182 79.9513
AXB4/PgnJ m 83.7 1.0861 85.8354 81.5646
AXB5/PgnJ f 82.2286 1.2316 84.6499 79.8073
AXB5/PgnJ m 84.5714 1.2316 86.9927 82.1501
AXB6/PgnJ f 88.7143 1.2316 91.1356 86.293
AXB6/PgnJ m 84.95 1.3303 87.5653 82.3347
AXB8/PgnJ f 80.4857 1.2316 82.907 78.0644
AXB8/PgnJ m 78.1 1.152 80.3649 75.8351
BXA11/PgnJ f 87.6 1.152 89.8649 85.3351
BXA11/PgnJ m 86.575 1.152 88.8399 84.3101
BXA12/PgnJ f 87.3875 1.152 89.6524 85.1226
BXA12/PgnJ m 86.475 1.152 88.7399 84.2101
BXA13/PgnJ f 84.275 1.152 86.5399 82.0101
BXA13/PgnJ m 80.1 1.152 82.3649 77.8351
BXA14/PgnJ f 85.4 1.152 87.6649 83.1351
BXA14/PgnJ m 72.5 1.152 74.7649 70.2351
BXA16/PgnJ f 88.3375 1.152 90.6024 86.0726
BXA16/PgnJ m 89.125 1.152 91.3899 86.8601
BXA1/PgnJ f 88.325 1.152 90.5899 86.0601
BXA1/PgnJ m 87.6833 1.3303 90.2987 85.068
BXA24/PgnJ f 82.5875 1.152 84.8524 80.3226
BXA24/PgnJ m 84.3375 1.152 86.6024 82.0726
BXA25/PgnJ f 85.3125 1.152 87.5774 83.0476
BXA25/PgnJ m 83.15 1.152 85.4149 80.8851
BXA26/PgnJ f 89.9111 1.0861 92.0465 87.7757
BXA26/PgnJ m 85.9571 1.2316 88.3785 83.5358
BXA2/PgnJ f 84.55 1.152 86.8149 82.2851
BXA2/PgnJ m 85.56 1.0304 87.5858 83.5342
BXA4/PgnJ f 85.6875 1.152 87.9524 83.4226
BXA4/PgnJ m 79.0375 1.152 81.3024 76.7726
BXA7/PgnJ f 88.8 1.152 91.0649 86.5351
BXA7/PgnJ m 86.35 1.152 88.6149 84.0851
BXA8/PgnJ f 85.1063 0.8146 86.7078 83.5047
BXA8/PgnJ m 84.2667 0.8413 85.9207 82.6126


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ both 84.9143 0.8432 86.572 83.2565
AXB12/PgnJ both 84.0729 0.7917 85.6293 82.5165
AXB13/PgnJ both 87.125 0.8146 88.7266 85.5234
AXB15/PgnJ both 88.1375 0.8146 89.7391 86.5359
AXB19a/PgnJ both 87.5937 0.8146 89.1953 85.9922
AXB19b/PgnJ both 85.0696 0.8432 86.7274 83.4119
AXB19/PgnJ both 88.2375 0.8146 89.8391 86.6359
AXB1/PgnJ both 85.225 0.9288 87.051 83.399
AXB23/PgnJ both 86.5657 0.954 88.4413 84.6902
AXB24/PgnJ both 85.8563 0.8146 87.4578 84.2547
AXB2/PgnJ both 90.2125 0.8146 91.8141 88.6109
AXB4/PgnJ both 83.1333 0.8587 84.8215 81.4452
AXB5/PgnJ both 83.4 0.8709 85.1121 81.6879
AXB6/PgnJ both 86.8321 0.9064 88.6142 85.0501
AXB8/PgnJ both 79.2929 0.8432 80.9506 77.6351
BXA11/PgnJ both 87.0875 0.8146 88.6891 85.4859
BXA12/PgnJ both 86.9313 0.8146 88.5328 85.3297
BXA13/PgnJ both 82.1875 0.8146 83.7891 80.5859
BXA14/PgnJ both 78.95 0.8146 80.5516 77.3484
BXA16/PgnJ both 88.7313 0.8146 90.3328 87.1297
BXA1/PgnJ both 88.0042 0.8799 89.734 86.2743
BXA24/PgnJ both 83.4625 0.8146 85.0641 81.8609
BXA25/PgnJ both 84.2313 0.8146 85.8328 82.6297
BXA26/PgnJ both 87.9341 0.821 89.5483 86.3199
BXA2/PgnJ both 85.055 0.7728 86.5744 83.5356
BXA4/PgnJ both 82.3625 0.8146 83.9641 80.7609
BXA7/PgnJ both 87.575 0.8146 89.1766 85.9734
BXA8/PgnJ both 84.6865 0.5855 85.8376 83.5353




  GWAS USING LINEAR MIXED MODELS