Project measure / variable:   Peters2   MCHC

ID, description, units MPD:6507   MCHC   mean RBC corpuscular hemoglobin concentration (MCHC)   [g/dL]  
Data set, strains Peters2   AXB BXA   28 strains     sex: both     age: 11wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters2 - mean RBC corpuscular hemoglobin concentration (MCHC)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means35.1   g/dL 34.7   g/dL
Median of the strain means35.0   g/dL 34.7   g/dL
SD of the strain means± 0.796 ± 0.908
Coefficient of variation (CV)0.0227 0.0262
Min–max range of strain means33.0   –   37.0   g/dL 32.9   –   36.9   g/dL
Mean sample size per strain7.7   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 15.6023 15.6023 23.1354 < 0.0001
strain 27 244.6959 9.0628 13.4385 < 0.0001
sex:strain 27 67.1406 2.4867 3.6873 < 0.0001
Residuals 392 264.3611 0.6744


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
AXB10/PgnJ f 35.0 0.282   7 0.107 0.00805 34.7, 35.5 -0.08
AXB10/PgnJ m 36.9 0.493   8 0.174 0.0134 36.1, 37.7 2.43
AXB12/PgnJ f 34.4 1.29   10 0.407 0.0373 32.4, 36.5 -0.83
AXB12/PgnJ m 34.2 1.01   8 0.359 0.0297 33.1, 36.1 -0.54
AXB13/PgnJ f 34.2 0.575   8 0.203 0.0168 33.4, 35.1 -1.09
AXB13/PgnJ m 34.5 0.749   8 0.265 0.0217 33.5, 35.8 -0.21
AXB15/PgnJ f 36.1 0.888   8 0.314 0.0246 35.2, 37.6 1.3
AXB15/PgnJ m 35.1 0.376   8 0.133 0.0107 34.5, 35.8 0.45
AXB19a/PgnJ f 35.6 1.56   8 0.551 0.0437 31.9, 36.8 0.67
AXB19a/PgnJ m 34.4 1.11   8 0.392 0.0322 33.3, 36.9 -0.32
AXB19b/PgnJ f 34.5 0.969   7 0.366 0.0281 32.6, 35.5 -0.71
AXB19b/PgnJ m 33.2 1.25   8 0.442 0.0377 30.4, 34.3 -1.64
AXB19/PgnJ f 35.5 1.15   8 0.405 0.0323 33.8, 37.0 0.55
AXB19/PgnJ m 34.8 1.25   8 0.44 0.0358 33.4, 36.4 0.12
AXB1/PgnJ f 34.3 0.934   5 0.418 0.0272 33.1, 35.6 -0.96
AXB1/PgnJ m 33.4 0.798   8 0.282 0.0239 32.5, 35.0 -1.42
AXB23/PgnJ f 34.7 0.409   5 0.183 0.0118 34.3, 35.2 -0.46
AXB23/PgnJ m 34.5 0.509   7 0.192 0.0148 33.5, 35.0 -0.21
AXB24/PgnJ f 34.7 1.17   8 0.412 0.0336 33.2, 36.0 -0.46
AXB24/PgnJ m 32.9 1.17   8 0.415 0.0357 31.1, 34.7 -1.97
AXB2/PgnJ f 37.0 0.773   8 0.273 0.0209 36.2, 38.7 2.43
AXB2/PgnJ m 36.4 0.713   8 0.252 0.0196 35.2, 37.1 1.88
AXB4/PgnJ f 34.3 0.418   6 0.171 0.0122 33.8, 34.9 -0.96
AXB4/PgnJ m 34.2 1.32   8 0.468 0.0388 33.1, 36.6 -0.54
AXB5/PgnJ f 35.5 0.321   7 0.121 0.00906 35.1, 35.9 0.55
AXB5/PgnJ m 34.8 0.798   7 0.301 0.0229 33.8, 35.9 0.12
AXB6/PgnJ f 34.9 1.76   7 0.666 0.0505 33.8, 38.6 -0.21
AXB6/PgnJ m 33.4 0.927   6 0.379 0.0278 32.3, 34.6 -1.42
AXB8/PgnJ f 35.5 0.907   7 0.343 0.0256 34.1, 36.7 0.55
AXB8/PgnJ m 34.3 1.08   8 0.383 0.0316 32.9, 35.5 -0.43
BXA11/PgnJ f 34.4 0.546   8 0.193 0.0159 33.5, 35.0 -0.83
BXA11/PgnJ m 34.7 0.652   8 0.231 0.0188 33.7, 35.8 0.01
BXA12/PgnJ f 34.4 0.41   8 0.145 0.0119 33.8, 35.0 -0.83
BXA12/PgnJ m 34.6 0.567   8 0.2 0.0164 34.0, 35.6 -0.1
BXA13/PgnJ f 36.0 0.758   8 0.268 0.021 35.0, 37.6 1.17
BXA13/PgnJ m 36.4 0.352   8 0.125 0.00968 36.0, 36.9 1.88
BXA14/PgnJ f 35.0 0.439   8 0.155 0.0125 34.4, 35.5 -0.08
BXA14/PgnJ m 34.8 0.499   8 0.176 0.0143 34.0, 35.5 0.12
BXA16/PgnJ f 35.4 0.796   8 0.282 0.0225 33.8, 36.3 0.42
BXA16/PgnJ m 34.9 0.402   8 0.142 0.0115 34.2, 35.5 0.23
BXA1/PgnJ f 33.0 0.76   8 0.269 0.023 31.6, 33.9 -2.59
BXA1/PgnJ m 34.2 0.333   6 0.136 0.00974 33.5, 34.4 -0.54
BXA24/PgnJ f 34.8 0.746   8 0.264 0.0215 33.2, 35.4 -0.33
BXA24/PgnJ m 35.4 0.436   8 0.154 0.0123 35.0, 36.4 0.78
BXA25/PgnJ f 35.0 0.383   8 0.136 0.011 34.4, 35.4 -0.08
BXA25/PgnJ m 34.4 0.6   8 0.212 0.0175 33.2, 35.1 -0.32
BXA26/PgnJ f 36.0 0.592   9 0.197 0.0164 34.7, 36.7 1.17
BXA26/PgnJ m 35.3 0.79   7 0.299 0.0224 34.0, 36.3 0.67
BXA2/PgnJ f 35.3 0.432   8 0.153 0.0122 34.7, 36.0 0.3
BXA2/PgnJ m 35.3 0.667   10 0.211 0.0189 34.3, 36.1 0.67
BXA4/PgnJ f 34.9 0.514   8 0.182 0.0147 34.2, 35.7 -0.21
BXA4/PgnJ m 34.5 0.539   8 0.191 0.0156 33.7, 35.3 -0.21
BXA7/PgnJ f 36.2 0.88   8 0.311 0.0243 35.1, 38.0 1.43
BXA7/PgnJ m 34.9 0.658   8 0.233 0.0189 34.0, 35.6 0.23
BXA8/PgnJ f 35.2 0.724   16 0.181 0.0206 34.0, 36.3 0.17
BXA8/PgnJ m 35.0 0.7   15 0.181 0.02 33.9, 36.1 0.34


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ f 35.0429 0.3104 35.6531 34.4326
AXB10/PgnJ m 36.9 0.2903 37.4708 36.3292
AXB12/PgnJ f 34.43 0.2597 34.9406 33.9194
AXB12/PgnJ m 34.1875 0.2903 34.7583 33.6167
AXB13/PgnJ f 34.225 0.2903 34.7958 33.6542
AXB13/PgnJ m 34.4875 0.2903 35.0583 33.9167
AXB15/PgnJ f 36.075 0.2903 36.6458 35.5042
AXB15/PgnJ m 35.1125 0.2903 35.6833 34.5417
AXB19a/PgnJ f 35.625 0.2903 36.1958 35.0542
AXB19a/PgnJ m 34.45 0.2903 35.0208 33.8792
AXB19b/PgnJ f 34.5429 0.3104 35.1531 33.9326
AXB19b/PgnJ m 33.1625 0.2903 33.7333 32.5917
AXB19/PgnJ f 35.45 0.2903 36.0208 34.8792
AXB19/PgnJ m 34.8 0.2903 35.3708 34.2292
AXB1/PgnJ f 34.28 0.3673 35.002 33.558
AXB1/PgnJ m 33.4 0.2903 33.9708 32.8292
AXB23/PgnJ f 34.68 0.3673 35.402 33.958
AXB23/PgnJ m 34.4714 0.3104 35.0817 33.8612
AXB24/PgnJ f 34.675 0.2903 35.2458 34.1042
AXB24/PgnJ m 32.875 0.2903 33.4458 32.3042
AXB2/PgnJ f 37.0375 0.2903 37.6083 36.4667
AXB2/PgnJ m 36.375 0.2903 36.9458 35.8042
AXB4/PgnJ f 34.3333 0.3353 34.9925 33.6742
AXB4/PgnJ m 34.1875 0.2903 34.7583 33.6167
AXB5/PgnJ f 35.5 0.3104 36.1102 34.8898
AXB5/PgnJ m 34.8429 0.3104 35.4531 34.2326
AXB6/PgnJ f 34.8857 0.3104 35.496 34.2755
AXB6/PgnJ m 33.4 0.3353 34.0591 32.7409
AXB8/PgnJ f 35.4714 0.3104 36.0817 34.8612
AXB8/PgnJ m 34.3 0.2903 34.8708 33.7292
BXA11/PgnJ f 34.4125 0.2903 34.9833 33.8417
BXA11/PgnJ m 34.6625 0.2903 35.2333 34.0917
BXA12/PgnJ f 34.3625 0.2903 34.9333 33.7917
BXA12/PgnJ m 34.6125 0.2903 35.1833 34.0417
BXA13/PgnJ f 36.05 0.2903 36.6208 35.4792
BXA13/PgnJ m 36.3875 0.2903 36.9583 35.8167
BXA14/PgnJ f 35.0125 0.2903 35.5833 34.4417
BXA14/PgnJ m 34.75 0.2903 35.3208 34.1792
BXA16/PgnJ f 35.4375 0.2903 36.0083 34.8667
BXA16/PgnJ m 34.9125 0.2903 35.4833 34.3417
BXA1/PgnJ f 33.0 0.2903 33.5708 32.4292
BXA1/PgnJ m 34.1667 0.3353 34.8258 33.5075
BXA24/PgnJ f 34.75 0.2903 35.3208 34.1792
BXA24/PgnJ m 35.4125 0.2903 35.9833 34.8417
BXA25/PgnJ f 34.9875 0.2903 35.5583 34.4167
BXA25/PgnJ m 34.35 0.2903 34.9208 33.7792
BXA26/PgnJ f 36.0 0.2737 36.5382 35.4618
BXA26/PgnJ m 35.2857 0.3104 35.896 34.6755
BXA2/PgnJ f 35.3125 0.2903 35.8833 34.7417
BXA2/PgnJ m 35.33 0.2597 35.8406 34.8194
BXA4/PgnJ f 34.8875 0.2903 35.4583 34.3167
BXA4/PgnJ m 34.525 0.2903 35.0958 33.9542
BXA7/PgnJ f 36.1625 0.2903 36.7333 35.5917
BXA7/PgnJ m 34.8875 0.2903 35.4583 34.3167
BXA8/PgnJ f 35.175 0.2053 35.5786 34.7714
BXA8/PgnJ m 34.9933 0.212 35.4102 34.5765


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ both 35.9714 0.2125 36.3892 35.5536
AXB12/PgnJ both 34.3088 0.1948 34.6917 33.9258
AXB13/PgnJ both 34.3563 0.2053 34.7599 33.9526
AXB15/PgnJ both 35.5938 0.2053 35.9974 35.1901
AXB19a/PgnJ both 35.0375 0.2053 35.4411 34.6339
AXB19b/PgnJ both 33.8527 0.2125 34.2705 33.4349
AXB19/PgnJ both 35.125 0.2053 35.5286 34.7214
AXB1/PgnJ both 33.84 0.2341 34.3002 33.3798
AXB23/PgnJ both 34.5757 0.2404 35.0484 34.103
AXB24/PgnJ both 33.775 0.2053 34.1786 33.3714
AXB2/PgnJ both 36.7063 0.2053 37.1099 36.3026
AXB4/PgnJ both 34.2604 0.2218 34.6964 33.8244
AXB5/PgnJ both 35.1714 0.2195 35.6029 34.7399
AXB6/PgnJ both 34.1429 0.2284 34.592 33.6937
AXB8/PgnJ both 34.8857 0.2125 35.3035 34.4679
BXA11/PgnJ both 34.5375 0.2053 34.9411 34.1339
BXA12/PgnJ both 34.4875 0.2053 34.8911 34.0839
BXA13/PgnJ both 36.2188 0.2053 36.6224 35.8151
BXA14/PgnJ both 34.8813 0.2053 35.2849 34.4776
BXA16/PgnJ both 35.175 0.2053 35.5786 34.7714
BXA1/PgnJ both 33.5833 0.2218 34.0193 33.1474
BXA24/PgnJ both 35.0813 0.2053 35.4849 34.6776
BXA25/PgnJ both 34.6688 0.2053 35.0724 34.2651
BXA26/PgnJ both 35.6429 0.2069 36.0497 35.236
BXA2/PgnJ both 35.3213 0.1948 35.7042 34.9383
BXA4/PgnJ both 34.7063 0.2053 35.1099 34.3026
BXA7/PgnJ both 35.525 0.2053 35.9286 35.1214
BXA8/PgnJ both 35.0842 0.1476 35.3743 34.794




  GWAS USING LINEAR MIXED MODELS