Phenotype measure:   Peters2   MCV

ID, description, units MPD:6505   MCV   mean RBC corpuscular volume (MCV)   [fL]
Data set, strains Peters2   AXB BXA   28 strains     sex: both     age: 11wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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Peters2 - mean RBC corpuscular volume (MCV)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means43.8   fL 43.6   fL
Median of the strain means44.0   fL 43.5   fL
SD of the strain means± 1.66 ± 1.59
Coefficient of variation (CV)0.0379 0.0364
Min–max range of strain means41.2   –   46.8   fL 40.9   –   47.1   fL
Mean sample size per strain7.7   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.0214 4.0214 2.9305 0.0877
strain 27 984.9858 36.481 26.5847 < 0.0001
sex:strain 27 118.5262 4.3899 3.199 < 0.0001
Residuals 393 539.2948 1.3723


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
AXB10/PgnJ f 46.8 0.223   7 0.0841 0.00476 46.3, 47.0 1.82
AXB10/PgnJ m 43.4 0.747   8 0.264 0.0172 42.6, 44.7 -0.11
AXB12/PgnJ f 46.0 2.08   10 0.658 0.0452 42.4, 48.1 1.34
AXB12/PgnJ m 45.4 2.18   8 0.769 0.0479 40.9, 48.3 1.15
AXB13/PgnJ f 44.2 0.399   8 0.141 0.00903 43.8, 45.1 0.25
AXB13/PgnJ m 44.1 0.563   8 0.199 0.0128 43.3, 44.9 0.33
AXB15/PgnJ f 41.8 0.74   8 0.261 0.0177 40.5, 42.6 -1.19
AXB15/PgnJ m 42.2 0.478   8 0.169 0.0113 41.5, 43.0 -0.86
AXB19a/PgnJ f 43.6 2.08   8 0.737 0.0478 41.7, 48.3 -0.11
AXB19a/PgnJ m 44.6 0.943   8 0.333 0.0211 42.9, 46.1 0.65
AXB19b/PgnJ f 46.1 1.7   7 0.644 0.037 44.4, 49.0 1.4
AXB19b/PgnJ m 46.1 1.38   8 0.489 0.03 44.0, 47.6 1.59
AXB19/PgnJ f 44.3 1.05   8 0.371 0.0237 43.2, 46.2 0.31
AXB19/PgnJ m 44.4 1.48   8 0.524 0.0334 42.4, 46.7 0.52
AXB1/PgnJ f 45.5 1.42   5 0.635 0.0312 44.2, 47.9 1.04
AXB1/PgnJ m 45.2 1.18   8 0.418 0.0262 43.7, 46.8 1.03
AXB23/PgnJ f 45.6 0.923   5 0.413 0.0202 44.8, 47.2 1.1
AXB23/PgnJ m 45.1 1.13   7 0.427 0.0251 43.7, 47.0 0.96
AXB24/PgnJ f 45.6 2.79   8 0.986 0.0611 42.5, 50.1 1.1
AXB24/PgnJ m 47.1 2.09   8 0.739 0.0443 42.5, 49.4 2.23
AXB2/PgnJ f 41.2 0.37   8 0.131 0.00899 40.6, 41.7 -1.56
AXB2/PgnJ m 41.2 0.818   8 0.289 0.0198 40.8, 43.2 -1.5
AXB4/PgnJ f 45.4 1.06   6 0.434 0.0234 43.7, 46.9 0.98
AXB4/PgnJ m 42.9 1.61   9 0.535 0.0374 40.2, 44.4 -0.42
AXB5/PgnJ f 44.6 0.94   7 0.355 0.0211 43.7, 46.5 0.5
AXB5/PgnJ m 46.0 1.78   7 0.674 0.0388 44.3, 49.0 1.53
AXB6/PgnJ f 44.1 0.66   7 0.25 0.015 42.9, 44.8 0.19
AXB6/PgnJ m 44.6 0.866   6 0.354 0.0194 43.5, 46.0 0.65
AXB8/PgnJ f 41.2 0.702   7 0.265 0.017 40.1, 42.3 -1.56
AXB8/PgnJ m 42.7 1.66   8 0.588 0.0389 40.5, 45.4 -0.55
BXA11/PgnJ f 44.8 0.878   8 0.31 0.0196 44.0, 46.7 0.62
BXA11/PgnJ m 43.7 1.71   8 0.605 0.0391 41.6, 47.4 0.08
BXA12/PgnJ f 44.7 0.695   8 0.246 0.0155 43.7, 45.9 0.56
BXA12/PgnJ m 43.4 0.837   8 0.296 0.0193 42.3, 44.6 -0.11
BXA13/PgnJ f 41.9 0.823   8 0.291 0.0196 41.0, 43.3 -1.13
BXA13/PgnJ m 42.5 0.588   8 0.208 0.0138 41.3, 43.2 -0.68
BXA14/PgnJ f 42.6 0.721   8 0.255 0.0169 41.4, 43.9 -0.71
BXA14/PgnJ m 42.6 0.521   8 0.184 0.0122 41.7, 43.4 -0.61
BXA16/PgnJ f 41.2 0.88   8 0.311 0.0213 39.4, 42.0 -1.56
BXA16/PgnJ m 40.9 0.469   8 0.166 0.0115 40.1, 41.5 -1.68
BXA1/PgnJ f 43.1 1.12   8 0.397 0.026 41.5, 44.8 -0.41
BXA1/PgnJ m 41.8 0.313   6 0.128 0.00748 41.3, 42.2 -1.12
BXA24/PgnJ f 44.4 0.783   8 0.277 0.0176 42.9, 45.2 0.37
BXA24/PgnJ m 44.2 0.785   8 0.278 0.0178 43.0, 45.1 0.4
BXA25/PgnJ f 42.4 1.09   8 0.386 0.0257 41.1, 44.4 -0.83
BXA25/PgnJ m 42.1 0.807   8 0.285 0.0192 41.2, 43.6 -0.93
BXA26/PgnJ f 43.1 1.01   9 0.337 0.0234 41.9, 45.5 -0.41
BXA26/PgnJ m 43.6 1.86   7 0.702 0.0426 41.3, 46.0 0.02
BXA2/PgnJ f 41.2 0.501   8 0.177 0.0122 40.3, 41.9 -1.56
BXA2/PgnJ m 41.1 0.888   10 0.281 0.0216 39.7, 42.5 -1.56
BXA4/PgnJ f 44.0 0.865   8 0.306 0.0197 42.5, 45.2 0.13
BXA4/PgnJ m 43.5 0.807   8 0.285 0.0185 42.2, 44.8 -0.05
BXA7/PgnJ f 43.3 1.2   8 0.425 0.0277 41.3, 44.9 -0.29
BXA7/PgnJ m 43.4 0.636   8 0.225 0.0147 42.9, 44.9 -0.11
BXA8/PgnJ f 43.1 1.0   16 0.251 0.0233 40.4, 44.5 -0.41
BXA8/PgnJ m 42.2 0.582   15 0.15 0.0138 41.1, 43.4 -0.86


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ f 46.7571 0.4428 47.6276 45.8867
AXB10/PgnJ m 43.3875 0.4142 44.2018 42.5732
AXB12/PgnJ f 46.02 0.3704 46.7483 45.2917
AXB12/PgnJ m 45.4 0.4142 46.2143 44.5857
AXB13/PgnJ f 44.175 0.4142 44.9893 43.3607
AXB13/PgnJ m 44.05 0.4142 44.8643 43.2357
AXB15/PgnJ f 41.7875 0.4142 42.6018 40.9732
AXB15/PgnJ m 42.2375 0.4142 43.0518 41.4232
AXB19a/PgnJ f 43.625 0.4142 44.4393 42.8107
AXB19a/PgnJ m 44.6 0.4142 45.4143 43.7857
AXB19b/PgnJ f 46.0571 0.4428 46.9276 45.1867
AXB19b/PgnJ m 46.1375 0.4142 46.9518 45.3232
AXB19/PgnJ f 44.275 0.4142 45.0893 43.4607
AXB19/PgnJ m 44.4125 0.4142 45.2268 43.5982
AXB1/PgnJ f 45.5 0.5239 46.53 44.47
AXB1/PgnJ m 45.2 0.4142 46.0143 44.3857
AXB23/PgnJ f 45.62 0.5239 46.65 44.59
AXB23/PgnJ m 45.0571 0.4428 45.9276 44.1867
AXB24/PgnJ f 45.625 0.4142 46.4393 44.8107
AXB24/PgnJ m 47.125 0.4142 47.9393 46.3107
AXB2/PgnJ f 41.1625 0.4142 41.9768 40.3482
AXB2/PgnJ m 41.2 0.4142 42.0143 40.3857
AXB4/PgnJ f 45.3667 0.4782 46.3069 44.4264
AXB4/PgnJ m 42.9444 0.3905 43.7121 42.1768
AXB5/PgnJ f 44.6 0.4428 45.4705 43.7295
AXB5/PgnJ m 46.0286 0.4428 46.899 45.1581
AXB6/PgnJ f 44.1429 0.4428 45.0133 43.2724
AXB6/PgnJ m 44.6333 0.4782 45.5736 43.6931
AXB8/PgnJ f 41.2286 0.4428 42.099 40.3581
AXB8/PgnJ m 42.7125 0.4142 43.5268 41.8982
BXA11/PgnJ f 44.7625 0.4142 45.5768 43.9482
BXA11/PgnJ m 43.7375 0.4142 44.5518 42.9232
BXA12/PgnJ f 44.7375 0.4142 45.5518 43.9232
BXA12/PgnJ m 43.45 0.4142 44.2643 42.6357
BXA13/PgnJ f 41.95 0.4142 42.7643 41.1357
BXA13/PgnJ m 42.55 0.4142 43.3643 41.7357
BXA14/PgnJ f 42.6 0.4142 43.4143 41.7857
BXA14/PgnJ m 42.5625 0.4142 43.3768 41.7482
BXA16/PgnJ f 41.2375 0.4142 42.0518 40.4232
BXA16/PgnJ m 40.95 0.4142 41.7643 40.1357
BXA1/PgnJ f 43.1125 0.4142 43.9268 42.2982
BXA1/PgnJ m 41.7833 0.4782 42.7236 40.8431
BXA24/PgnJ f 44.3875 0.4142 45.2018 43.5732
BXA24/PgnJ m 44.175 0.4142 44.9893 43.3607
BXA25/PgnJ f 42.4125 0.4142 43.2268 41.5982
BXA25/PgnJ m 42.0625 0.4142 42.8768 41.2482
BXA26/PgnJ f 43.1 0.3905 43.8677 42.3323
BXA26/PgnJ m 43.6 0.4428 44.4705 42.7295
BXA2/PgnJ f 41.2375 0.4142 42.0518 40.4232
BXA2/PgnJ m 41.13 0.3704 41.8583 40.4017
BXA4/PgnJ f 44.0 0.4142 44.8143 43.1857
BXA4/PgnJ m 43.525 0.4142 44.3393 42.7107
BXA7/PgnJ f 43.3 0.4142 44.1143 42.4857
BXA7/PgnJ m 43.425 0.4142 44.2393 42.6107
BXA8/PgnJ f 43.0938 0.2929 43.6695 42.518
BXA8/PgnJ m 42.2133 0.3025 42.808 41.6187


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ both 45.0723 0.3031 45.6683 44.4763
AXB12/PgnJ both 45.71 0.2778 46.2562 45.1638
AXB13/PgnJ both 44.1125 0.2929 44.6883 43.5367
AXB15/PgnJ both 42.0125 0.2929 42.5883 41.4367
AXB19a/PgnJ both 44.1125 0.2929 44.6883 43.5367
AXB19b/PgnJ both 46.0973 0.3031 46.6933 45.5013
AXB19/PgnJ both 44.3438 0.2929 44.9195 43.768
AXB1/PgnJ both 45.35 0.3339 46.0065 44.6935
AXB23/PgnJ both 45.3386 0.343 46.0128 44.6643
AXB24/PgnJ both 46.375 0.2929 46.9508 45.7992
AXB2/PgnJ both 41.1813 0.2929 41.757 40.6055
AXB4/PgnJ both 44.1556 0.3087 44.7625 43.5486
AXB5/PgnJ both 45.3143 0.3131 45.9298 44.6988
AXB6/PgnJ both 44.3881 0.3259 45.0287 43.7474
AXB8/PgnJ both 41.9705 0.3031 42.5665 41.3746
BXA11/PgnJ both 44.25 0.2929 44.8258 43.6742
BXA12/PgnJ both 44.0938 0.2929 44.6695 43.518
BXA13/PgnJ both 42.25 0.2929 42.8258 41.6742
BXA14/PgnJ both 42.5813 0.2929 43.157 42.0055
BXA16/PgnJ both 41.0938 0.2929 41.6695 40.518
BXA1/PgnJ both 42.4479 0.3163 43.0698 41.826
BXA24/PgnJ both 44.2813 0.2929 44.857 43.7055
BXA25/PgnJ both 42.2375 0.2929 42.8133 41.6617
BXA26/PgnJ both 43.35 0.2952 43.9303 42.7697
BXA2/PgnJ both 41.1838 0.2778 41.73 40.6375
BXA4/PgnJ both 43.7625 0.2929 44.3383 43.1867
BXA7/PgnJ both 43.3625 0.2929 43.9383 42.7867
BXA8/PgnJ both 42.6535 0.2105 43.0674 42.2397




  GWAS USING LINEAR MIXED MODELS