Project measure / variable:   Peters2   mHGB

ID, description, units MPD:6503   mHGB   measured hemoglobin (HGB)   [g/dL]  
Data set, strains Peters2   AXB BXA   28 strains     sex: both     age: 11wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters2 - measured hemoglobin (HGB)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means14.3   g/dL 14.0   g/dL
Median of the strain means14.3   g/dL 14.0   g/dL
SD of the strain means± 0.481 ± 0.526
Coefficient of variation (CV)0.0335 0.0375
Min–max range of strain means13.3   –   15.3   g/dL 12.9   –   15.8   g/dL
Mean sample size per strain7.7   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 9.8676 9.8676 20.3673 < 0.0001
strain 27 80.7384 2.9903 6.1721 < 0.0001
sex:strain 27 24.5703 0.91 1.8783 0.0056
Residuals 392 189.9179 0.4845


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
AXB10/PgnJ f 14.1 0.382   7 0.144 0.027 13.6, 14.6 -0.49
AXB10/PgnJ m 13.5 0.301   8 0.106 0.0223 13.1, 14.0 -1.0
AXB12/PgnJ f 14.3 1.06   10 0.337 0.0747 12.5, 15.5 -0.07
AXB12/PgnJ m 14.5 0.588   8 0.208 0.0404 13.9, 15.8 0.9
AXB13/PgnJ f 14.7 0.596   8 0.211 0.0406 13.6, 15.3 0.76
AXB13/PgnJ m 14.5 0.307   8 0.108 0.0211 13.9, 14.9 0.9
AXB15/PgnJ f 13.5 0.396   8 0.14 0.0294 13.0, 14.3 -1.74
AXB15/PgnJ m 13.8 0.484   8 0.171 0.0352 13.2, 14.8 -0.43
AXB19a/PgnJ f 14.8 0.705   8 0.249 0.0475 13.3, 15.7 0.97
AXB19a/PgnJ m 14.2 0.71   8 0.251 0.05 13.4, 15.3 0.33
AXB19b/PgnJ f 14.6 0.991   7 0.375 0.0677 12.9, 15.8 0.55
AXB19b/PgnJ m 14.0 1.04   8 0.369 0.0745 11.7, 14.9 -0.05
AXB19/PgnJ f 13.9 0.681   8 0.241 0.049 12.8, 14.6 -0.91
AXB19/PgnJ m 13.7 0.396   8 0.14 0.0288 13.3, 14.4 -0.62
AXB1/PgnJ f 14.7 1.09   5 0.488 0.0741 13.4, 16.0 0.76
AXB1/PgnJ m 12.9 0.802   8 0.283 0.062 11.8, 14.1 -2.14
AXB23/PgnJ f 14.9 0.434   5 0.194 0.0292 14.2, 15.4 1.17
AXB23/PgnJ m 14.4 0.565   7 0.214 0.0394 13.4, 15.2 0.71
AXB24/PgnJ f 13.3 0.529   8 0.187 0.0398 12.8, 14.1 -2.15
AXB24/PgnJ m 13.9 0.898   8 0.318 0.0646 12.7, 15.6 -0.24
AXB2/PgnJ f 14.6 0.878   8 0.31 0.0603 13.9, 16.2 0.55
AXB2/PgnJ m 14.1 0.805   8 0.285 0.057 13.0, 15.4 0.14
AXB4/PgnJ f 14.4 0.812   6 0.331 0.0565 12.8, 15.0 0.13
AXB4/PgnJ m 13.8 0.546   8 0.193 0.0396 13.2, 14.7 -0.43
AXB5/PgnJ f 15.2 0.392   7 0.148 0.0258 14.7, 15.7 1.8
AXB5/PgnJ m 14.1 0.834   7 0.315 0.0592 12.5, 15.2 0.14
AXB6/PgnJ f 14.6 0.499   7 0.189 0.0341 13.8, 15.1 0.55
AXB6/PgnJ m 14.3 0.383   6 0.156 0.0267 13.9, 15.0 0.52
AXB8/PgnJ f 14.2 1.01   7 0.383 0.0715 12.3, 15.4 -0.28
AXB8/PgnJ m 13.1 0.598   8 0.211 0.0458 12.3, 13.8 -1.76
BXA11/PgnJ f 14.1 0.453   8 0.16 0.0321 13.4, 14.9 -0.49
BXA11/PgnJ m 14.0 0.919   8 0.325 0.0657 13.1, 16.0 -0.05
BXA12/PgnJ f 14.1 0.446   8 0.158 0.0317 13.4, 14.7 -0.49
BXA12/PgnJ m 13.9 0.488   8 0.173 0.0351 12.8, 14.3 -0.24
BXA13/PgnJ f 15.3 0.707   8 0.25 0.0463 14.5, 16.2 2.01
BXA13/PgnJ m 15.8 0.444   8 0.157 0.0282 15.1, 16.4 3.37
BXA14/PgnJ f 13.8 0.524   8 0.185 0.0378 13.1, 14.5 -1.11
BXA14/PgnJ m 13.7 0.615   8 0.217 0.0449 12.9, 14.5 -0.62
BXA16/PgnJ f 13.7 0.665   8 0.235 0.0484 12.3, 14.4 -1.32
BXA16/PgnJ m 13.7 0.55   8 0.195 0.0402 12.9, 14.3 -0.62
BXA1/PgnJ f 14.1 0.609   8 0.215 0.0431 13.1, 14.8 -0.49
BXA1/PgnJ m 14.0 0.407   6 0.166 0.0291 13.5, 14.6 -0.05
BXA24/PgnJ f 14.7 1.64   8 0.58 0.111 13.0, 16.8 0.76
BXA24/PgnJ m 14.1 0.98   8 0.346 0.0693 13.3, 16.0 0.14
BXA25/PgnJ f 14.2 0.272   8 0.0962 0.0191 13.7, 14.5 -0.28
BXA25/PgnJ m 13.6 0.736   8 0.26 0.054 12.1, 14.2 -0.81
BXA26/PgnJ f 14.8 0.287   9 0.0957 0.0195 14.3, 15.3 0.97
BXA26/PgnJ m 14.6 0.756   7 0.286 0.0517 13.7, 15.6 1.09
BXA2/PgnJ f 14.4 0.729   8 0.258 0.0505 13.1, 15.5 0.13
BXA2/PgnJ m 14.5 0.554   10 0.175 0.0383 13.6, 15.5 0.9
BXA4/PgnJ f 13.8 0.591   8 0.209 0.0429 13.0, 14.7 -1.11
BXA4/PgnJ m 13.9 0.655   8 0.231 0.0473 12.6, 14.5 -0.24
BXA7/PgnJ f 14.3 0.751   8 0.266 0.0526 13.5, 15.7 -0.07
BXA7/PgnJ m 14.1 0.513   8 0.181 0.0364 13.4, 15.0 0.14
BXA8/PgnJ f 14.3 0.705   16 0.176 0.0494 12.7, 15.3 -0.07
BXA8/PgnJ m 14.0 0.684   15 0.177 0.0487 12.5, 15.0 -0.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ f 14.1286 0.2631 14.6458 13.6113
AXB10/PgnJ m 13.525 0.2461 14.0088 13.0412
AXB12/PgnJ f 14.26 0.2201 14.6927 13.8273
AXB12/PgnJ m 14.5375 0.2461 15.0213 14.0537
AXB13/PgnJ f 14.6875 0.2461 15.1713 14.2037
AXB13/PgnJ m 14.5375 0.2461 15.0213 14.0537
AXB15/PgnJ f 13.5 0.2461 13.9838 13.0162
AXB15/PgnJ m 13.7625 0.2461 14.2463 13.2787
AXB19a/PgnJ f 14.85 0.2461 15.3338 14.3662
AXB19a/PgnJ m 14.2125 0.2461 14.6963 13.7287
AXB19b/PgnJ f 14.6429 0.2631 15.1601 14.1256
AXB19b/PgnJ m 14.025 0.2461 14.5088 13.5412
AXB19/PgnJ f 13.9125 0.2461 14.3963 13.4287
AXB19/PgnJ m 13.7375 0.2461 14.2213 13.2537
AXB1/PgnJ f 14.74 0.3113 15.352 14.128
AXB1/PgnJ m 12.9375 0.2461 13.4213 12.4537
AXB23/PgnJ f 14.86 0.3113 15.472 14.248
AXB23/PgnJ m 14.3571 0.2631 14.8744 13.8399
AXB24/PgnJ f 13.3 0.2461 13.7838 12.8162
AXB24/PgnJ m 13.9125 0.2461 14.3963 13.4287
AXB2/PgnJ f 14.5625 0.2461 15.0463 14.0787
AXB2/PgnJ m 14.125 0.2461 14.6088 13.6412
AXB4/PgnJ f 14.3667 0.2842 14.9253 13.808
AXB4/PgnJ m 13.7875 0.2461 14.2713 13.3037
AXB5/PgnJ f 15.2 0.2631 15.7172 14.6828
AXB5/PgnJ m 14.0857 0.2631 14.6029 13.5685
AXB6/PgnJ f 14.6286 0.2631 15.1458 14.1113
AXB6/PgnJ m 14.3333 0.2842 14.892 13.7747
AXB8/PgnJ f 14.1714 0.2631 14.6887 13.6542
AXB8/PgnJ m 13.05 0.2461 13.5338 12.5662
BXA11/PgnJ f 14.1375 0.2461 14.6213 13.6537
BXA11/PgnJ m 13.9875 0.2461 14.4713 13.5037
BXA12/PgnJ f 14.075 0.2461 14.5588 13.5912
BXA12/PgnJ m 13.9125 0.2461 14.3963 13.4287
BXA13/PgnJ f 15.275 0.2461 15.7588 14.7912
BXA13/PgnJ m 15.75 0.2461 16.2338 15.2662
BXA14/PgnJ f 13.85 0.2461 14.3338 13.3662
BXA14/PgnJ m 13.7125 0.2461 14.1963 13.2287
BXA16/PgnJ f 13.725 0.2461 14.2088 13.2412
BXA16/PgnJ m 13.7 0.2461 14.1838 13.2162
BXA1/PgnJ f 14.1375 0.2461 14.6213 13.6537
BXA1/PgnJ m 13.9833 0.2842 14.542 13.4247
BXA24/PgnJ f 14.725 0.2461 15.2088 14.2412
BXA24/PgnJ m 14.1375 0.2461 14.6213 13.6537
BXA25/PgnJ f 14.2375 0.2461 14.7213 13.7537
BXA25/PgnJ m 13.6125 0.2461 14.0963 13.1287
BXA26/PgnJ f 14.7667 0.232 15.2228 14.3105
BXA26/PgnJ m 14.6143 0.2631 15.1315 14.0971
BXA2/PgnJ f 14.4375 0.2461 14.9213 13.9537
BXA2/PgnJ m 14.46 0.2201 14.8927 14.0273
BXA4/PgnJ f 13.7875 0.2461 14.2713 13.3037
BXA4/PgnJ m 13.85 0.2461 14.3338 13.3662
BXA7/PgnJ f 14.2875 0.2461 14.7713 13.8037
BXA7/PgnJ m 14.0625 0.2461 14.5463 13.5787
BXA8/PgnJ f 14.2687 0.174 14.6109 13.9266
BXA8/PgnJ m 14.04 0.1797 14.3933 13.6867


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ both 13.8268 0.1801 14.1809 13.4727
AXB12/PgnJ both 14.3987 0.1651 14.7233 14.0742
AXB13/PgnJ both 14.6125 0.174 14.9546 14.2704
AXB15/PgnJ both 13.6312 0.174 13.9734 13.2891
AXB19a/PgnJ both 14.5312 0.174 14.8734 14.1891
AXB19b/PgnJ both 14.3339 0.1801 14.6881 13.9798
AXB19/PgnJ both 13.825 0.174 14.1671 13.4829
AXB1/PgnJ both 13.8387 0.1984 14.2288 13.4487
AXB23/PgnJ both 14.6086 0.2038 15.0092 14.2079
AXB24/PgnJ both 13.6063 0.174 13.9484 13.2641
AXB2/PgnJ both 14.3437 0.174 14.6859 14.0016
AXB4/PgnJ both 14.0771 0.188 14.4466 13.7076
AXB5/PgnJ both 14.6429 0.186 15.0086 14.2771
AXB6/PgnJ both 14.481 0.1936 14.8616 14.1003
AXB8/PgnJ both 13.6107 0.1801 13.9648 13.2566
BXA11/PgnJ both 14.0625 0.174 14.4046 13.7204
BXA12/PgnJ both 13.9937 0.174 14.3359 13.6516
BXA13/PgnJ both 15.5125 0.174 15.8546 15.1704
BXA14/PgnJ both 13.7812 0.174 14.1234 13.4391
BXA16/PgnJ both 13.7125 0.174 14.0546 13.3704
BXA1/PgnJ both 14.0604 0.188 14.4299 13.6909
BXA24/PgnJ both 14.4312 0.174 14.7734 14.0891
BXA25/PgnJ both 13.925 0.174 14.2671 13.5829
BXA26/PgnJ both 14.6905 0.1754 15.0353 14.3457
BXA2/PgnJ both 14.4487 0.1651 14.7733 14.1242
BXA4/PgnJ both 13.8187 0.174 14.1609 13.4766
BXA7/PgnJ both 14.175 0.174 14.5171 13.8329
BXA8/PgnJ both 14.1544 0.1251 14.4003 13.9085




  GWAS USING LINEAR MIXED MODELS