Project measure / variable:   Peters2   RBC

ID, description, units MPD:6502   RBC   red blood cell count (RBC; per volume x 106)   [n/µL]  
Data set, strains Peters2   AXB BXA   28 strains     sex: both     age: 11wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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Peters2 - red blood cell count (RBC; per volume x 106)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains28 strains
Mean of the strain means9.36   n/µL 9.30   n/µL
Median of the strain means9.41   n/µL 9.29   n/µL
SD of the strain means± 0.379 ± 0.381
Coefficient of variation (CV)0.0405 0.0410
Min–max range of strain means8.44   –   10.1   n/µL 8.44   –   10.2   n/µL
Mean sample size per strain7.7   mice 7.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.3137 0.3137 1.6533 0.1993
strain 27 50.0254 1.8528 9.7655 < 0.0001
sex:strain 27 11.7075 0.4336 2.2854 0.0003
Residuals 393 74.5632 0.1897


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
AXB10/PgnJ f 8.64 0.284   7 0.107 0.0329 8.31, 8.93 -1.89
AXB10/PgnJ m 8.44 0.195   8 0.0691 0.0231 8.13, 8.71 -2.25
AXB12/PgnJ f 9.02 0.657   10 0.208 0.0729 8.03, 10.0 -0.89
AXB12/PgnJ m 9.39 0.645   8 0.228 0.0687 8.63, 10.7 0.25
AXB13/PgnJ f 9.71 0.333   8 0.118 0.0342 9.1, 10.1 0.93
AXB13/PgnJ m 9.56 0.304   8 0.108 0.0318 8.87, 9.78 0.69
AXB15/PgnJ f 8.96 0.277   8 0.098 0.0309 8.62, 9.34 -1.05
AXB15/PgnJ m 9.29 0.375   8 0.133 0.0404 8.94, 10.1 -0.02
AXB19a/PgnJ f 9.57 0.478   8 0.169 0.0499 8.55, 10.2 0.56
AXB19a/PgnJ m 9.25 0.384   8 0.136 0.0416 8.78, 9.89 -0.12
AXB19b/PgnJ f 9.2 0.48   7 0.181 0.0522 8.28, 9.87 -0.42
AXB19b/PgnJ m 9.16 0.409   8 0.144 0.0446 8.33, 9.77 -0.36
AXB19/PgnJ f 8.88 0.318   8 0.113 0.0359 8.39, 9.19 -1.26
AXB19/PgnJ m 8.89 0.251   8 0.0889 0.0283 8.49, 9.22 -1.07
AXB1/PgnJ f 9.45 0.575   5 0.257 0.0609 8.6, 10.0 0.24
AXB1/PgnJ m 8.57 0.404   8 0.143 0.0472 8.06, 9.15 -1.91
AXB23/PgnJ f 9.41 0.211   5 0.0946 0.0225 9.13, 9.67 0.14
AXB23/PgnJ m 9.25 0.291   7 0.11 0.0314 8.79, 9.74 -0.12
AXB24/PgnJ f 8.44 0.38   8 0.134 0.045 7.84, 9.16 -2.42
AXB24/PgnJ m 8.99 0.551   8 0.195 0.0613 8.24, 10.2 -0.8
AXB2/PgnJ f 9.55 0.61   8 0.216 0.0639 9.01, 10.6 0.51
AXB2/PgnJ m 9.42 0.574   8 0.203 0.0609 8.61, 10.3 0.32
AXB4/PgnJ f 9.21 0.492   6 0.201 0.0534 8.28, 9.68 -0.39
AXB4/PgnJ m 9.47 0.322   9 0.107 0.034 8.87, 9.86 0.46
AXB5/PgnJ f 9.6 0.17   7 0.0643 0.0177 9.4, 9.9 0.64
AXB5/PgnJ m 8.8 0.59   7 0.223 0.067 7.8, 9.64 -1.3
AXB6/PgnJ f 9.54 0.645   7 0.244 0.0676 8.17, 10.1 0.48
AXB6/PgnJ m 9.63 0.331   6 0.135 0.0344 9.12, 9.99 0.87
AXB8/PgnJ f 9.68 0.658   7 0.249 0.068 8.33, 10.3 0.85
AXB8/PgnJ m 8.92 0.466   8 0.165 0.0523 8.24, 9.51 -0.99
BXA11/PgnJ f 9.18 0.219   8 0.0774 0.0239 8.95, 9.56 -0.47
BXA11/PgnJ m 9.23 0.497   8 0.176 0.0538 8.57, 9.99 -0.17
BXA12/PgnJ f 9.16 0.266   8 0.0941 0.0291 8.79, 9.54 -0.52
BXA12/PgnJ m 9.24 0.352   8 0.124 0.038 8.49, 9.63 -0.15
BXA13/PgnJ f 10.1 0.309   8 0.109 0.0307 9.73, 10.7 1.96
BXA13/PgnJ m 10.2 0.3   8 0.106 0.0294 9.8, 10.7 2.37
BXA14/PgnJ f 9.3 0.324   8 0.115 0.0349 8.9, 9.75 -0.15
BXA14/PgnJ m 9.28 0.399   8 0.141 0.043 8.77, 9.81 -0.04
BXA16/PgnJ f 9.38 0.295   8 0.104 0.0314 8.76, 9.65 0.06
BXA16/PgnJ m 9.58 0.321   8 0.113 0.0335 9.17, 9.96 0.74
BXA1/PgnJ f 9.93 0.429   8 0.152 0.0432 9.13, 10.4 1.51
BXA1/PgnJ m 9.8 0.273   6 0.112 0.0279 9.44, 10.2 1.32
BXA24/PgnJ f 9.54 1.07   8 0.379 0.112 8.3, 10.8 0.48
BXA24/PgnJ m 9.04 0.419   8 0.148 0.0463 8.52, 9.75 -0.67
BXA25/PgnJ f 9.6 0.278   8 0.0983 0.029 9.11, 10.0 0.64
BXA25/PgnJ m 9.42 0.481   8 0.17 0.051 8.47, 9.92 0.32
BXA26/PgnJ f 9.52 0.154   9 0.0515 0.0162 9.22, 9.73 0.43
BXA26/PgnJ m 9.51 0.497   7 0.188 0.0523 8.61, 10.2 0.56
BXA2/PgnJ f 9.91 0.366   8 0.129 0.0369 9.26, 10.4 1.46
BXA2/PgnJ m 9.95 0.484   10 0.153 0.0486 9.37, 10.6 1.71
BXA4/PgnJ f 8.99 0.379   8 0.134 0.0422 8.52, 9.76 -0.97
BXA4/PgnJ m 9.23 0.434   8 0.153 0.047 8.46, 9.81 -0.17
BXA7/PgnJ f 9.13 0.482   8 0.171 0.0528 8.68, 9.98 -0.6
BXA7/PgnJ m 9.29 0.241   8 0.0851 0.0259 8.93, 9.74 -0.02
BXA8/PgnJ f 9.41 0.349   16 0.0872 0.0371 8.79, 9.98 0.14
BXA8/PgnJ m 9.5 0.475   15 0.123 0.05 8.35, 10.2 0.53


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ f 8.6357 0.1646 8.9594 8.312
AXB10/PgnJ m 8.4438 0.154 8.7465 8.141
AXB12/PgnJ f 9.016 0.1377 9.2868 8.7452
AXB12/PgnJ m 9.3925 0.154 9.6953 9.0897
AXB13/PgnJ f 9.715 0.154 10.0178 9.4122
AXB13/PgnJ m 9.5625 0.154 9.8653 9.2597
AXB15/PgnJ f 8.9563 0.154 9.259 8.6535
AXB15/PgnJ m 9.2875 0.154 9.5903 8.9847
AXB19a/PgnJ f 9.5725 0.154 9.8753 9.2697
AXB19a/PgnJ m 9.2512 0.154 9.554 8.9485
AXB19b/PgnJ f 9.1957 0.1646 9.5194 8.872
AXB19b/PgnJ m 9.1562 0.154 9.459 8.8535
AXB19/PgnJ f 8.8787 0.154 9.1815 8.576
AXB19/PgnJ m 8.8925 0.154 9.1953 8.5897
AXB1/PgnJ f 9.448 0.1948 9.831 9.065
AXB1/PgnJ m 8.5712 0.154 8.874 8.2685
AXB23/PgnJ f 9.412 0.1948 9.795 9.029
AXB23/PgnJ m 9.2457 0.1646 9.5694 8.922
AXB24/PgnJ f 8.4375 0.154 8.7403 8.1347
AXB24/PgnJ m 8.9862 0.154 9.289 8.6835
AXB2/PgnJ f 9.5525 0.154 9.8553 9.2497
AXB2/PgnJ m 9.425 0.154 9.7278 9.1222
AXB4/PgnJ f 9.2133 0.1778 9.5629 8.8637
AXB4/PgnJ m 9.4722 0.1452 9.7577 9.1868
AXB5/PgnJ f 9.6 0.1646 9.9237 9.2763
AXB5/PgnJ m 8.8 0.1646 9.1237 8.4763
AXB6/PgnJ f 9.5371 0.1646 9.8608 9.2135
AXB6/PgnJ m 9.63 0.1778 9.9796 9.2804
AXB8/PgnJ f 9.6786 0.1646 10.0022 9.3549
AXB8/PgnJ m 8.9187 0.154 9.2215 8.616
BXA11/PgnJ f 9.1787 0.154 9.4815 8.876
BXA11/PgnJ m 9.2337 0.154 9.5365 8.931
BXA12/PgnJ f 9.165 0.154 9.4678 8.8622
BXA12/PgnJ m 9.245 0.154 9.5478 8.9422
BXA13/PgnJ f 10.08 0.154 10.3828 9.7772
BXA13/PgnJ m 10.1875 0.154 10.4903 9.8847
BXA14/PgnJ f 9.3 0.154 9.6028 8.9972
BXA14/PgnJ m 9.2762 0.154 9.579 8.9735
BXA16/PgnJ f 9.3812 0.154 9.684 9.0785
BXA16/PgnJ m 9.5825 0.154 9.8853 9.2797
BXA1/PgnJ f 9.9262 0.154 10.229 9.6235
BXA1/PgnJ m 9.7983 0.1778 10.1479 9.4487
BXA24/PgnJ f 9.5362 0.154 9.839 9.2335
BXA24/PgnJ m 9.04 0.154 9.3428 8.7372
BXA25/PgnJ f 9.5975 0.154 9.9003 9.2947
BXA25/PgnJ m 9.4187 0.154 9.7215 9.116
BXA26/PgnJ f 9.5222 0.1452 9.8077 9.2368
BXA26/PgnJ m 9.5086 0.1646 9.8322 9.1849
BXA2/PgnJ f 9.91 0.154 10.2128 9.6072
BXA2/PgnJ m 9.952 0.1377 10.2228 9.6812
BXA4/PgnJ f 8.9937 0.154 9.2965 8.691
BXA4/PgnJ m 9.2287 0.154 9.5315 8.926
BXA7/PgnJ f 9.135 0.154 9.4378 8.8322
BXA7/PgnJ m 9.2887 0.154 9.5915 8.986
BXA8/PgnJ f 9.41 0.1089 9.6241 9.1959
BXA8/PgnJ m 9.5007 0.1125 9.7218 9.2796


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
AXB10/PgnJ both 8.5397 0.1127 8.7613 8.3181
AXB12/PgnJ both 9.2043 0.1033 9.4074 9.0011
AXB13/PgnJ both 9.6388 0.1089 9.8528 9.4247
AXB15/PgnJ both 9.1219 0.1089 9.336 8.9078
AXB19a/PgnJ both 9.4119 0.1089 9.626 9.1978
AXB19b/PgnJ both 9.176 0.1127 9.3976 8.9544
AXB19/PgnJ both 8.8856 0.1089 9.0997 8.6715
AXB1/PgnJ both 9.0096 0.1242 9.2537 8.7655
AXB23/PgnJ both 9.3289 0.1275 9.5796 9.0781
AXB24/PgnJ both 8.7119 0.1089 8.926 8.4978
AXB2/PgnJ both 9.4887 0.1089 9.7028 9.2747
AXB4/PgnJ both 9.3428 0.1148 9.5684 9.1171
AXB5/PgnJ both 9.2 0.1164 9.4289 8.9711
AXB6/PgnJ both 9.5836 0.1212 9.8218 9.3454
AXB8/PgnJ both 9.2987 0.1127 9.5203 9.0771
BXA11/PgnJ both 9.2062 0.1089 9.4203 8.9922
BXA12/PgnJ both 9.205 0.1089 9.4191 8.9909
BXA13/PgnJ both 10.1337 0.1089 10.3478 9.9197
BXA14/PgnJ both 9.2881 0.1089 9.5022 9.074
BXA16/PgnJ both 9.4819 0.1089 9.696 9.2678
BXA1/PgnJ both 9.8623 0.1176 10.0935 9.631
BXA24/PgnJ both 9.2881 0.1089 9.5022 9.074
BXA25/PgnJ both 9.5081 0.1089 9.7222 9.294
BXA26/PgnJ both 9.5154 0.1098 9.7312 9.2996
BXA2/PgnJ both 9.931 0.1033 10.1341 9.7279
BXA4/PgnJ both 9.1112 0.1089 9.3253 8.8972
BXA7/PgnJ both 9.2119 0.1089 9.426 8.9978
BXA8/PgnJ both 9.4553 0.0783 9.6092 9.3014




  GWAS USING LINEAR MIXED MODELS