Project measure / variable:   Bolivar2   act_altered_1

ID, description, units MPD:63913   act_altered_1   activity (beam breaks) during 1 min period of altered context on day 2   [n]  1st min  
Data set, strains Bolivar2   inbred   8 strains     sex: both     age: 9-20wks
Procedure fear conditioning test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Bolivar2 - activity (beam breaks) during 1 min period of altered context on day 2 1st min



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means137.8   n 139.4   n
Median of the strain means140.9   n 148.3   n
SD of the strain means± 25.215 ± 38.415
Coefficient of variation (CV)0.183 0.2756
Min–max range of strain means94.5   –   170.2   n 81.06   –   190.3   n
Mean sample size per strain18.0   mice 18.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 180.5 180.5 0.1728 0.678
strain 7 247637.6528 35376.8075 33.8641 < 0.0001
sex:strain 7 18443.9444 2634.8492 2.5222 0.0158
Residuals 272 284150.2222 1044.6699


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 94.5 37.851   18 8.9217 0.4005 25.0, 180.0 -1.72
129S1/SvImJ m 81.06 41.384   18 9.7543 0.5106 16.0, 168.0 -1.52
A/J f 112.3 25.128   18 5.9227 0.2237 73.0, 149.0 -1.01
A/J m 96.78 47.304   18 11.15 0.4888 31.0, 180.0 -1.11
BALB/cByJ f 165.4 39.025   18 9.1983 0.236 89.0, 226.0 1.1
BALB/cByJ m 190.3 41.336   18 9.7431 0.2172 125.0, 290.0 1.33
C3H/HeJ f 144.9 26.904   18 6.3413 0.1856 97.0, 197.0 0.28
C3H/HeJ m 142.2 34.535   18 8.1399 0.2428 59.0, 195.0 0.07
C57BL/6J f 137.4 30.128   18 7.1011 0.2192 84.0, 180.0 -0.01
C57BL/6J m 154.4 27.703   18 6.5296 0.1794 110.0, 204.0 0.39
CBA/J f 170.2 28.121   18 6.6281 0.1652 124.0, 234.0 1.29
CBA/J m 172.2 24.912   18 5.8719 0.1447 125.0, 221.0 0.85
DBA/2J f 133.2 26.369   18 6.2152 0.198 59.0, 167.0 -0.18
DBA/2J m 114.4 34.974   18 8.2435 0.3057 49.0, 172.0 -0.65
FVB/NJ f 144.3 17.719   18 4.1765 0.1228 112.0, 172.0 0.26
FVB/NJ m 163.6 15.267   18 3.5985 0.0933 139.0, 194.0 0.63


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 94.5 7.6182 109.4982 79.5018
129S1/SvImJ m 81.0556 7.6182 96.0537 66.0574
A/J f 112.3333 7.6182 127.3315 97.3352
A/J m 96.7778 7.6182 111.7759 81.7796
BALB/cByJ f 165.3889 7.6182 180.3871 150.3907
BALB/cByJ m 190.3333 7.6182 205.3315 175.3352
C3H/HeJ f 144.9444 7.6182 159.9426 129.9463
C3H/HeJ m 142.2222 7.6182 157.2204 127.2241
C57BL/6J f 137.4444 7.6182 152.4426 122.4463
C57BL/6J m 154.4444 7.6182 169.4426 139.4463
CBA/J f 170.2222 7.6182 185.2204 155.2241
CBA/J m 172.1667 7.6182 187.1648 157.1685
DBA/2J f 133.1667 7.6182 148.1648 118.1685
DBA/2J m 114.3889 7.6182 129.3871 99.3907
FVB/NJ f 144.2778 7.6182 159.2759 129.2796
FVB/NJ m 163.5556 7.6182 178.5537 148.5574


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 87.7778 5.3869 98.3831 77.1725
A/J both 104.5556 5.3869 115.1609 93.9503
BALB/cByJ both 177.8611 5.3869 188.4664 167.2558
C3H/HeJ both 143.5833 5.3869 154.1886 132.978
C57BL/6J both 145.9444 5.3869 156.5497 135.3391
CBA/J both 171.1944 5.3869 181.7997 160.5891
DBA/2J both 123.7778 5.3869 134.3831 113.1725
FVB/NJ both 153.9167 5.3869 164.522 143.3114




  GWAS USING LINEAR MIXED MODELS