Phenotype measure:   Bolivar2   act_context_pct

ID, description, units MPD:63912   act_context_pct   percentage of baseline activity that occurred after contextual conditioning   [%]
Data set, strains Bolivar2   inbred   8 strains     sex: both     age: 9-20wks
Procedure fear conditioning test
Ontology mappings

  STRAIN COMPARISON PLOT
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Bolivar2 - percentage of baseline activity that occurred after contextual conditioning



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means42.49   % 46.115   %
Median of the strain means44.534   % 44.377   %
SD of the strain means± 14.615 ± 18.05
Coefficient of variation (CV)0.344 0.3914
Min–max range of strain means16.078   –   58.83   % 24.836   –   79.0   %
Mean sample size per strain18.0   mice 18.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 945.5813 945.5813 3.8632 0.0504
strain 7 58474.9444 8353.5635 34.1285 < 0.0001
sex:strain 7 9481.3533 1354.479 5.5337 < 0.0001
Residuals 272 66576.9723 244.7683


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 16.078 7.1076   18 1.6753 0.4421 4.71, 36.03 -1.81
129S1/SvImJ m 24.836 18.207   18 4.2915 0.7331 7.3, 74.1 -1.18
A/J f 44.412 15.625   18 3.6828 0.3518 21.54, 73.16 0.13
A/J m 39.164 15.91   18 3.75 0.4062 16.58, 74.44 -0.39
BALB/cByJ f 44.054 11.289   18 2.6608 0.2562 23.25, 60.99 0.11
BALB/cByJ m 30.636 12.591   18 2.9677 0.411 7.49, 50.98 -0.86
C3H/HeJ f 51.05 13.02   18 3.0689 0.2551 25.45, 68.77 0.59
C3H/HeJ m 57.11 17.615   18 4.152 0.3085 22.2, 93.98 0.61
C57BL/6J f 25.623 11.535   18 2.7189 0.4502 8.36, 50.57 -1.15
C57BL/6J m 31.666 10.727   18 2.5283 0.3387 13.82, 48.5 -0.8
CBA/J f 58.83 17.076   18 4.0249 0.2903 21.47, 88.02 1.12
CBA/J m 49.591 16.057   18 3.7846 0.3238 15.67, 70.44 0.19
DBA/2J f 55.22 17.955   18 4.232 0.3252 31.08, 96.56 0.87
DBA/2J m 79.0 20.052   18 4.7262 0.2538 41.67, 112.79 1.82
FVB/NJ f 44.657 21.676   18 5.1091 0.4854 13.81, 80.95 0.15
FVB/NJ m 56.92 16.714   18 3.9396 0.2937 32.14, 89.29 0.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 16.0783 3.6876 23.3382 8.8185
129S1/SvImJ m 24.8356 3.6876 32.0954 17.5757
A/J f 44.4117 3.6876 51.6715 37.1518
A/J m 39.1644 3.6876 46.4243 31.9046
BALB/cByJ f 44.0539 3.6876 51.3137 36.7941
BALB/cByJ m 30.6356 3.6876 37.8954 23.3757
C3H/HeJ f 51.0467 3.6876 58.3065 43.7868
C3H/HeJ m 57.1056 3.6876 64.3654 49.8457
C57BL/6J f 25.6228 3.6876 32.8826 18.363
C57BL/6J m 31.6661 3.6876 38.9259 24.4063
CBA/J f 58.8311 3.6876 66.0909 51.5713
CBA/J m 49.5911 3.6876 56.8509 42.3313
DBA/2J f 55.2183 3.6876 62.4782 47.9585
DBA/2J m 78.995 3.6876 86.2548 71.7352
FVB/NJ f 44.6567 3.6876 51.9165 37.3968
FVB/NJ m 56.9178 3.6876 64.1776 49.658


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 20.4569 2.6075 25.5904 15.3235
A/J both 41.7881 2.6075 46.9215 36.6546
BALB/cByJ both 37.3447 2.6075 42.4782 32.2113
C3H/HeJ both 54.0761 2.6075 59.2096 48.9426
C57BL/6J both 28.6444 2.6075 33.7779 23.511
CBA/J both 54.2111 2.6075 59.3446 49.0776
DBA/2J both 67.1067 2.6075 72.2401 61.9732
FVB/NJ both 50.7872 2.6075 55.9207 45.6538




GWAS analysis not available: At least 12 strains are required