Project measure / variable:   Bolivar2   act_context_mean

ID, description, units MPD:63911   act_context_mean   activity (beam breaks) during 1 min period of contextual conditioning on day 2   [n]  mean  
Data set, strains Bolivar2   inbred   8 strains     sex: both     age: 9-20wks
Procedure fear conditioning test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Bolivar2 - activity (beam breaks) during 1 min period of contextual conditioning on day 2 mean



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means60.14   n 62.14   n
Median of the strain means65.78   n 64.78   n
SD of the strain means± 24.379 ± 23.523
Coefficient of variation (CV)0.4054 0.3785
Min–max range of strain means17.889   –   93.9   n 23.289   –   90.39   n
Mean sample size per strain18.0   mice 18.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 288.8006 288.8006 0.6126 0.4345
strain 7 135986.2311 19426.6044 41.2051 < 0.0001
sex:strain 7 8623.0906 1231.8701 2.6129 0.0126
Residuals 272 128237.5378 471.4615


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 17.889 5.7714   18 1.3603 0.3226 8.2, 28.2 -1.73
129S1/SvImJ m 23.289 11.101   18 2.6165 0.4767 8.6, 52.2 -1.65
A/J f 42.744 16.057   18 3.7847 0.3757 20.8, 71.4 -0.71
A/J m 42.911 14.801   18 3.4887 0.3449 22.8, 68.0 -0.82
BALB/cByJ f 77.97 21.107   18 4.9751 0.2707 42.4, 111.2 0.73
BALB/cByJ m 60.61 24.481   18 5.7703 0.4039 14.8, 103.6 -0.07
C3H/HeJ f 65.08 19.7   18 4.6432 0.3027 28.2, 104.6 0.2
C3H/HeJ m 68.96 24.603   18 5.7991 0.3568 23.8, 121.8 0.29
C57BL/6J f 42.022 19.597   18 4.6192 0.4664 12.4, 78.6 -0.74
C57BL/6J m 45.211 15.521   18 3.6583 0.3433 21.4, 71.4 -0.72
CBA/J f 93.9 29.618   18 6.9811 0.3154 31.0, 136.6 1.38
CBA/J m 82.73 28.859   18 6.802 0.3488 24.0, 124.2 0.88
DBA/2J f 66.48 16.33   18 3.8491 0.2457 41.4, 97.8 0.26
DBA/2J m 83.04 18.398   18 4.3365 0.2215 51.4, 120.0 0.89
FVB/NJ f 75.04 37.38   18 8.8106 0.4981 22.4, 140.2 0.61
FVB/NJ m 90.39 23.113   18 5.4477 0.2557 53.8, 141.8 1.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 17.8889 5.1178 27.9645 7.8133
129S1/SvImJ m 23.2889 5.1178 33.3645 13.2133
A/J f 42.7444 5.1178 52.8201 32.6688
A/J m 42.9111 5.1178 52.9867 32.8355
BALB/cByJ f 77.9667 5.1178 88.0423 67.891
BALB/cByJ m 60.6111 5.1178 70.6867 50.5355
C3H/HeJ f 65.0778 5.1178 75.1534 55.0022
C3H/HeJ m 68.9556 5.1178 79.0312 58.8799
C57BL/6J f 42.0222 5.1178 52.0978 31.9466
C57BL/6J m 45.2111 5.1178 55.2867 35.1355
CBA/J f 93.9 5.1178 103.9756 83.8244
CBA/J m 82.7333 5.1178 92.809 72.6577
DBA/2J f 66.4778 5.1178 76.5534 56.4022
DBA/2J m 83.0444 5.1178 93.1201 72.9688
FVB/NJ f 75.0444 5.1178 85.1201 64.9688
FVB/NJ m 90.3889 5.1178 100.4645 80.3133


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 20.5889 3.6189 27.7134 13.4644
A/J both 42.8278 3.6189 49.9523 35.7032
BALB/cByJ both 69.2889 3.6189 76.4134 62.1644
C3H/HeJ both 67.0167 3.6189 74.1412 59.8921
C57BL/6J both 43.6167 3.6189 50.7412 36.4921
CBA/J both 88.3167 3.6189 95.4412 81.1921
DBA/2J both 74.7611 3.6189 81.8856 67.6366
FVB/NJ both 82.7167 3.6189 89.8412 75.5921




  GWAS USING LINEAR MIXED MODELS