Project measure / variable:   Bolivar1   margin_dist_d1

ID, description, units MPD:63440   margin_dist_d1   distance traveled in periphery, 5 min test in dark   [cm]  day 1  
Data set, strains Bolivar1   inbred   10 strains     sex: both     age:
Procedure open field test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Bolivar1 - distance traveled in periphery, 5 min test in dark day 1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means881.0   cm 912.5   cm
Median of the strain means907.4   cm 1062.0   cm
SD of the strain means± 168.3 ± 326.0
Coefficient of variation (CV)0.191 0.3573
Min–max range of strain means587.8   –   1200.0   cm 453.4   –   1370.0   cm
Mean sample size per strain12.0   mice 12.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 59126.2042 59126.2042 0.6583 0.418
strain 9 10118324.0375 1124258.2264 12.5172 < 0.0001
sex:strain 9 4421907.6708 491323.0745 5.4703 < 0.0001
Residuals 220 19759745.25 89817.0239


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 940.3 579.0   12 167.2 0.6158 146.0, 2055.0 0.35
129S1/SvImJ m 518.3 309.4   12 89.31 0.5969 73.0, 887.0 -1.21
A/J f 587.8 326.1   12 94.15 0.5549 122.0, 990.0 -1.74
A/J m 453.4 191.0   12 55.15 0.4213 153.0, 718.0 -1.41
B6129SF1/J f 981.8 300.5   12 86.74 0.306 526.0, 1524.0 0.6
B6129SF1/J m 1370.0 468.7   12 135.3 0.3421 784.0, 2121.0 1.4
B6C3F1/J f 1200.0 453.9   12 131.0 0.3781 744.0, 2151.0 1.9
B6C3F1/J m 1105.0 218.9   12 63.19 0.1981 793.0, 1454.0 0.59
BALB/cByJ f 880.3 273.4   12 78.93 0.3106 287.0, 1276.0 0.0
BALB/cByJ m 1110.0 238.4   12 68.82 0.2148 674.0, 1535.0 0.61
C3H/HeJ f 888.4 170.1   12 49.107 0.1915 622.0, 1142.0 0.04
C3H/HeJ m 1203.0 283.6   12 81.87 0.2358 874.0, 1737.0 0.89
C57BL/6J f 926.4 263.2   12 75.97 0.2841 554.0, 1410.0 0.27
C57BL/6J m 1030.0 246.2   12 71.08 0.2391 615.0, 1403.0 0.36
CBA/J f 688.7 189.5   12 54.7 0.2751 347.0, 1046.0 -1.14
CBA/J m 656.2 84.86   12 24.496 0.1293 526.0, 807.0 -0.79
DBA/2J f 939.4 165.1   12 47.671 0.1758 655.0, 1189.0 0.35
DBA/2J m 583.8 332.6   12 96.02 0.5697 159.0, 1021.0 -1.01
FVB/NJ f 776.6 159.3   12 45.998 0.2052 500.0, 993.0 -0.62
FVB/NJ m 1095.0 285.2   12 82.32 0.2605 635.0, 1696.0 0.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 940.3333 86.5145 1110.8365 769.8301
129S1/SvImJ m 518.3333 86.5145 688.8365 347.8301
A/J f 587.75 86.5145 758.2532 417.2468
A/J m 453.4167 86.5145 623.9199 282.9135
B6129SF1/J f 981.8333 86.5145 1152.3365 811.3301
B6129SF1/J m 1370.1667 86.5145 1540.6699 1199.6635
B6C3F1/J f 1200.4167 86.5145 1370.9199 1029.9135
B6C3F1/J m 1105.1667 86.5145 1275.6699 934.6635
BALB/cByJ f 880.3333 86.5145 1050.8365 709.8301
BALB/cByJ m 1109.5833 86.5145 1280.0865 939.0801
C3H/HeJ f 888.4167 86.5145 1058.9199 717.9135
C3H/HeJ m 1202.8333 86.5145 1373.3365 1032.3301
C57BL/6J f 926.4167 86.5145 1096.9199 755.9135
C57BL/6J m 1029.8333 86.5145 1200.3365 859.3301
CBA/J f 688.6667 86.5145 859.1699 518.1635
CBA/J m 656.1667 86.5145 826.6699 485.6635
DBA/2J f 939.4167 86.5145 1109.9199 768.9135
DBA/2J m 583.8333 86.5145 754.3365 413.3301
FVB/NJ f 776.5833 86.5145 947.0865 606.0801
FVB/NJ m 1094.75 86.5145 1265.2532 924.2468


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 729.3333 61.175 849.8973 608.7694
A/J both 520.5833 61.175 641.1473 400.0194
B6129SF1/J both 1176.0 61.175 1296.564 1055.436
B6C3F1/J both 1152.7917 61.175 1273.3556 1032.2277
BALB/cByJ both 994.9583 61.175 1115.5223 874.3944
C3H/HeJ both 1045.625 61.175 1166.189 925.061
C57BL/6J both 978.125 61.175 1098.689 857.561
CBA/J both 672.4167 61.175 792.9806 551.8527
DBA/2J both 761.625 61.175 882.189 641.061
FVB/NJ both 935.6667 61.175 1056.2306 815.1027




  GWAS USING LINEAR MIXED MODELS