Project measure / variable:   Bolivar1   cc_revs_d1

ID, description, units MPD:63434   cc_revs_d1   number of counter-clockwise revolution episodes, 5 min test in dark   [n]  day 1  
Data set, strains Bolivar1   inbred   10 strains     sex: both     age:
Procedure open field test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Bolivar1 - number of counter-clockwise revolution episodes, 5 min test in dark day 1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means3.7583   n 4.3333   n
Median of the strain means4.25   n 4.7083   n
SD of the strain means± 1.1768 ± 2.095
Coefficient of variation (CV)0.3131 0.4835
Min–max range of strain means2.0833   –   5.0833   n 1.3333   –   6.8333   n
Mean sample size per strain12.0   mice 12.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 19.8375 19.8375 3.3543 0.0684
strain 9 400.3708 44.4856 7.5221 < 0.0001
sex:strain 9 223.2042 24.8005 4.1935 0.0001
Residuals 220 1301.0833 5.914


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 4.75 3.6213   12 1.0454 0.7624 1.0, 11.0 0.84
129S1/SvImJ m 2.3333 2.5346   12 0.73168 1.0863 -0.95
A/J f 2.0833 1.5643   12 0.45157 0.7509 -1.42
A/J m 1.3333 1.2309   12 0.35533 0.9232 -1.43
B6129SF1/J f 4.0833 2.4664   12 0.712 0.604 1.0, 8.0 0.28
B6129SF1/J m 6.25 2.0057   12 0.57899 0.3209 4.0, 10.0 0.91
B6C3F1/J f 4.4167 2.1088   12 0.60875 0.4775 2.0, 9.0 0.56
B6C3F1/J m 5.25 3.0785   12 0.88869 0.5864 1.0, 11.0 0.44
BALB/cByJ f 4.5 2.8123   12 0.81184 0.625 0.63
BALB/cByJ m 6.3333 2.2697   12 0.6552 0.3584 3.0, 10.0 0.95
C3H/HeJ f 2.5833 1.379   12 0.39807 0.5338 -1.0
C3H/HeJ m 6.8333 2.3677   12 0.6835 0.3465 3.0, 10.0 1.19
C57BL/6J f 5.0833 3.0883   12 0.89153 0.6075 2.0, 13.0 1.13
C57BL/6J m 6.1667 2.8868   12 0.83333 0.4681 2.0, 10.0 0.88
CBA/J f 2.1667 1.8007   12 0.51981 0.8311 -1.35
CBA/J m 1.9167 1.379   12 0.39807 0.7195 -1.15
DBA/2J f 4.9167 2.7122   12 0.78295 0.5516 2.0, 12.0 0.98
DBA/2J m 2.75 3.0785   12 0.88869 1.1195 -0.76
FVB/NJ f 3.0 2.0   12 0.57735 0.6667 -0.64
FVB/NJ m 4.1667 2.5166   12 0.72648 0.604 1.0, 9.0 -0.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 4.75 0.702 6.1335 3.3665
129S1/SvImJ m 2.3333 0.702 3.7169 0.9498
A/J f 2.0833 0.702 3.4669 0.6998
A/J m 1.3333 0.702 2.7169 -0.0502
B6129SF1/J f 4.0833 0.702 5.4669 2.6998
B6129SF1/J m 6.25 0.702 7.6335 4.8665
B6C3F1/J f 4.4167 0.702 5.8002 3.0331
B6C3F1/J m 5.25 0.702 6.6335 3.8665
BALB/cByJ f 4.5 0.702 5.8835 3.1165
BALB/cByJ m 6.3333 0.702 7.7169 4.9498
C3H/HeJ f 2.5833 0.702 3.9669 1.1998
C3H/HeJ m 6.8333 0.702 8.2169 5.4498
C57BL/6J f 5.0833 0.702 6.4669 3.6998
C57BL/6J m 6.1667 0.702 7.5502 4.7831
CBA/J f 2.1667 0.702 3.5502 0.7831
CBA/J m 1.9167 0.702 3.3002 0.5331
DBA/2J f 4.9167 0.702 6.3002 3.5331
DBA/2J m 2.75 0.702 4.1335 1.3665
FVB/NJ f 3.0 0.702 4.3835 1.6165
FVB/NJ m 4.1667 0.702 5.5502 2.7831


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 3.5417 0.4964 4.52 2.5634
A/J both 1.7083 0.4964 2.6866 0.73
B6129SF1/J both 5.1667 0.4964 6.145 4.1884
B6C3F1/J both 4.8333 0.4964 5.8116 3.855
BALB/cByJ both 5.4167 0.4964 6.395 4.4384
C3H/HeJ both 4.7083 0.4964 5.6866 3.73
C57BL/6J both 5.625 0.4964 6.6033 4.6467
CBA/J both 2.0417 0.4964 3.02 1.0634
DBA/2J both 3.8333 0.4964 4.8116 2.855
FVB/NJ both 3.5833 0.4964 4.5616 2.605




  GWAS USING LINEAR MIXED MODELS