Project measure / variable:   Bolivar1   vert_act_d1

ID, description, units MPD:63413   vert_act_d1   vertical activity (beam breaks), 5 min test in dark   [n]  day 1  
Data set, strains Bolivar1   inbred   10 strains     sex: both     age:
Procedure open field test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Bolivar1 - vertical activity (beam breaks), 5 min test in dark day 1



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested10 strains10 strains
Mean of the strain means46.258   n 53.4   n
Median of the strain means44.0   n 54.25   n
SD of the strain means± 16.77 ± 43.744
Coefficient of variation (CV)0.3625 0.8191
Min–max range of strain means20.5   –   82.5   n 3.0   –   151.3   n
Mean sample size per strain12.0   mice 12.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3067.35 3067.35 3.1197 0.0787
strain 9 115430.6667 12825.6296 13.0445 < 0.0001
sex:strain 9 121684.4833 13520.4981 13.7512 < 0.0001
Residuals 220 216308.8333 983.222


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 42.667 35.988   12 10.389 0.8435 1.0, 99.0 -0.21
129S1/SvImJ m 9.8333 20.78   12 5.9985 2.1132 -1.0
A/J f 20.5 17.651   12 5.0953 0.861 -1.54
A/J m 11.75 12.92   12 3.7297 1.0996 -0.95
B6129SF1/J f 37.0 32.63   12 9.4195 0.8819 -0.55
B6129SF1/J m 70.0 29.906   12 8.6331 0.4272 22.0, 119.0 0.38
B6C3F1/J f 61.42 15.163   12 4.377 0.2469 30.0, 82.0 0.9
B6C3F1/J m 73.75 25.616   12 7.3948 0.3473 31.0, 121.0 0.47
BALB/cByJ f 53.58 46.042   12 13.291 0.8593 6.0, 155.0 0.44
BALB/cByJ m 71.33 35.52   12 10.254 0.4979 24.0, 154.0 0.41
C3H/HeJ f 38.083 16.34   12 4.7169 0.4291 6.0, 65.0 -0.49
C3H/HeJ m 61.25 22.087   12 6.376 0.3606 30.0, 97.0 0.18
C57BL/6J f 45.333 13.186   12 3.8066 0.2909 27.0, 72.0 -0.06
C57BL/6J m 47.25 13.903   12 4.0135 0.2942 35.0, 77.0 -0.14
CBA/J f 36.083 43.536   12 12.568 1.2065 5.0, 142.0 -0.61
CBA/J m 34.583 14.902   12 4.302 0.4309 5.0, 63.0 -0.43
DBA/2J f 82.5 56.91   12 16.428 0.6898 2.0, 163.0 2.16
DBA/2J m 3.0 4.8053   12 1.3872 1.6018 -1.15
FVB/NJ f 45.417 28.42   12 8.2043 0.6258 4.0, 105.0 -0.05
FVB/NJ m 151.3 62.64   12 18.082 0.4139 41.0, 232.0 2.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 42.6667 9.0518 60.506 24.8273
129S1/SvImJ m 9.8333 9.0518 27.6727 -8.006
A/J f 20.5 9.0518 38.3393 2.6607
A/J m 11.75 9.0518 29.5893 -6.0893
B6129SF1/J f 37.0 9.0518 54.8393 19.1607
B6129SF1/J m 70.0 9.0518 87.8393 52.1607
B6C3F1/J f 61.4167 9.0518 79.256 43.5773
B6C3F1/J m 73.75 9.0518 91.5893 55.9107
BALB/cByJ f 53.5833 9.0518 71.4227 35.744
BALB/cByJ m 71.3333 9.0518 89.1727 53.494
C3H/HeJ f 38.0833 9.0518 55.9227 20.244
C3H/HeJ m 61.25 9.0518 79.0893 43.4107
C57BL/6J f 45.3333 9.0518 63.1727 27.494
C57BL/6J m 47.25 9.0518 65.0893 29.4107
CBA/J f 36.0833 9.0518 53.9227 18.244
CBA/J m 34.5833 9.0518 52.4227 16.744
DBA/2J f 82.5 9.0518 100.3393 64.6607
DBA/2J m 3.0 9.0518 20.8393 -14.8393
FVB/NJ f 45.4167 9.0518 63.256 27.5773
FVB/NJ m 151.3333 9.0518 169.1727 133.494


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 26.25 6.4006 38.8643 13.6357
A/J both 16.125 6.4006 28.7393 3.5107
B6129SF1/J both 53.5 6.4006 66.1143 40.8857
B6C3F1/J both 67.5833 6.4006 80.1977 54.969
BALB/cByJ both 62.4583 6.4006 75.0727 49.844
C3H/HeJ both 49.6667 6.4006 62.281 37.0523
C57BL/6J both 46.2917 6.4006 58.906 33.6773
CBA/J both 35.3333 6.4006 47.9477 22.719
DBA/2J both 42.75 6.4006 55.3643 30.1357
FVB/NJ both 98.375 6.4006 110.9893 85.7607




  GWAS USING LINEAR MIXED MODELS