Project measure / variable:   GMC21   bw

ID, description, units MPD:57001   bw   body weight   [g]  
Data set, strains GMC21   inbred w/CC8   8 strains     sex: both     age: 21wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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GMC21 - body weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means23.818   g 28.26   g
Median of the strain means21.515   g 26.256   g
SD of the strain means± 13.638 ± 12.696
Coefficient of variation (CV)0.5726 0.4492
Min–max range of strain means13.925   –   56.43   g 17.517   –   57.12   g
Mean sample size per strain10.4   mice 12.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 980.8556 980.8556 79.3278 < 0.0001
strain 7 26514.9728 3787.8533 306.347 < 0.0001
sex:strain 7 234.7718 33.5388 2.7125 0.011
Residuals 163 2015.4275 12.3646


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 22.345 1.698   10 0.53697 0.076 19.379, 24.791 -0.11
129S1/SvImJ m 27.06 3.1495   12 0.90918 0.1164 23.288, 32.373 -0.09
A/J f 21.292 0.997   10 0.31528 0.0468 20.142, 23.586 -0.19
A/J m 25.453 1.5905   12 0.45914 0.0625 23.288, 28.116 -0.22
C57BL/6J f 21.738 1.5794   10 0.49945 0.0727 20.097, 24.858 -0.15
C57BL/6J m 30.079 2.2097   12 0.6379 0.0735 27.438, 33.234 0.14
CAST/EiJ f 13.925 1.182   12 0.3412 0.0849 12.747, 16.942 -0.73
CAST/EiJ m 17.517 1.283   12 0.37037 0.0732 14.222, 19.004 -0.85
NOD/ShiLtJ f 22.609 4.168   11 1.2567 0.1843 12.756, 28.077 -0.09
NOD/ShiLtJ m 30.121 2.2968   12 0.66303 0.0763 26.96, 36.036 0.15
NZO/HlLtJ f 56.43 3.5331   10 1.1173 0.0626 49.314, 61.414 2.39
NZO/HlLtJ m 57.12 10.63   12 3.0685 0.1861 35.926, 68.017 2.27
PWK/PhJ f 18.002 1.8397   10 0.58176 0.1022 15.393, 20.351 -0.43
PWK/PhJ m 21.043 2.1021   12 0.60683 0.0999 18.088, 24.452 -0.57
WSB/EiJ f 14.206 2.5718   10 0.81326 0.181 11.833, 19.26 -0.7
WSB/EiJ m 17.688 0.87329   12 0.2521 0.0494 15.906, 18.707 -0.83


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 22.3447 1.112 24.5404 20.149
129S1/SvImJ m 27.0598 1.0151 29.0642 25.0554
A/J f 21.2917 1.112 23.4874 19.096
A/J m 25.4533 1.0151 27.4576 23.4489
C57BL/6J f 21.7385 1.112 23.9342 19.5428
C57BL/6J m 30.0786 1.0151 32.083 28.0742
CAST/EiJ f 13.9246 1.0151 15.929 11.9202
CAST/EiJ m 17.5165 1.0151 19.5209 15.5121
NOD/ShiLtJ f 22.6095 1.0602 24.703 20.5159
NOD/ShiLtJ m 30.1207 1.0151 32.1251 28.1164
NZO/HlLtJ f 56.4307 1.112 58.6264 54.235
NZO/HlLtJ m 57.1176 1.0151 59.122 55.1132
PWK/PhJ f 18.0018 1.112 20.1975 15.8061
PWK/PhJ m 21.0426 1.0151 23.047 19.0382
WSB/EiJ f 14.2062 1.112 16.4019 12.0105
WSB/EiJ m 17.6878 1.0151 19.6921 15.6834


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 24.7023 0.7528 26.1888 23.2158
A/J both 23.3725 0.7528 24.859 21.886
C57BL/6J both 25.9085 0.7528 27.395 24.422
CAST/EiJ both 15.7205 0.7178 17.1379 14.3032
NOD/ShiLtJ both 26.3651 0.7339 27.8143 24.9159
NZO/HlLtJ both 56.7741 0.7528 58.2606 55.2876
PWK/PhJ both 19.5222 0.7528 21.0087 18.0357
WSB/EiJ both 15.947 0.7528 17.4335 14.4605




  GWAS USING LINEAR MIXED MODELS