Project measure / variable:   GMC15   RBC

ID, description, units MPD:56404   RBC   red blood cell count (RBC; per volume x 106)   [n/µL]  
Data set, strains GMC15   inbred w/CC8   8 strains     sex: both     age: 20-21wks
Procedure complete blood count
Ontology mappings

  STRAIN COMPARISON PLOT
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GMC15 - red blood cell count (RBC; per volume x 106)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means10.9   n/µL 11.4   n/µL
Median of the strain means11.0   n/µL 11.0   n/µL
SD of the strain means± 0.908 ± 1.24
Coefficient of variation (CV)0.0833 0.109
Min–max range of strain means9.32   –   12.0   n/µL 9.80   –   13.9   n/µL
Mean sample size per strain10.2   mice 11.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 10.7854 10.7854 10.5124 0.0014
strain 7 158.2981 22.614 22.0415 < 0.0001
sex:strain 7 27.2135 3.8876 3.7892 0.0008
Residuals 161 165.182 1.026


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 11.8 1.52   10 0.48 0.129 10.3, 15.7 1.0
129S1/SvImJ m 12.1 0.631   12 0.182 0.0524 10.9, 12.9 0.56
A/J f 10.1 0.474   10 0.15 0.0469 9.67, 11.1 -0.87
A/J m 9.8 0.486   12 0.14 0.0496 8.54, 10.6 -1.29
C57BL/6J f 10.7 0.599   10 0.189 0.056 10.0, 11.7 -0.21
C57BL/6J m 10.6 0.74   12 0.214 0.0697 9.74, 12.5 -0.65
CAST/EiJ f 11.3 0.415   12 0.12 0.0367 10.7, 12.2 0.45
CAST/EiJ m 11.9 0.582   12 0.168 0.0488 11.2, 13.5 0.4
NOD/ShiLtJ f 9.32 0.431   10 0.136 0.0463 8.6, 9.94 -1.73
NOD/ShiLtJ m 10.9 0.827   12 0.239 0.0759 9.74, 12.1 -0.4
NZO/HlLtJ f 12.0 0.779   10 0.246 0.0649 10.2, 13.1 1.22
NZO/HlLtJ m 13.9 2.38   12 0.688 0.172 10.9, 18.8 2.02
PWK/PhJ f 11.4 1.29   10 0.407 0.113 10.0, 14.6 0.56
PWK/PhJ m 11.0 1.49   11 0.45 0.136 8.67, 13.2 -0.32
WSB/EiJ f 10.5 0.509   10 0.161 0.0485 9.19, 10.9 -0.43
WSB/EiJ m 11.0 0.591   12 0.171 0.0538 10.2, 12.1 -0.32


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 11.764 0.3203 12.3965 11.1315
129S1/SvImJ m 12.0517 0.2924 12.6291 11.4742
A/J f 10.118 0.3203 10.7505 9.4855
A/J m 9.7983 0.2924 10.3758 9.2209
C57BL/6J f 10.684 0.3203 11.3165 10.0515
C57BL/6J m 10.6233 0.2924 11.2008 10.0459
CAST/EiJ f 11.3242 0.2924 11.9016 10.7467
CAST/EiJ m 11.9358 0.2924 12.5133 11.3584
NOD/ShiLtJ f 9.323 0.3203 9.9555 8.6905
NOD/ShiLtJ m 10.8908 0.2924 11.4683 10.3134
NZO/HlLtJ f 11.996 0.3203 12.6285 11.3635
NZO/HlLtJ m 13.8908 0.2924 14.4683 13.3134
PWK/PhJ f 11.397 0.3203 12.0295 10.7645
PWK/PhJ m 10.9518 0.3054 11.5549 10.3487
WSB/EiJ f 10.51 0.3203 11.1425 9.8775
WSB/EiJ m 10.9817 0.2924 11.5591 10.4042


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 11.9078 0.2168 12.3361 11.4796
A/J both 9.9582 0.2168 10.3864 9.5299
C57BL/6J both 10.6537 0.2168 11.0819 10.2254
CAST/EiJ both 11.63 0.2068 12.0383 11.2217
NOD/ShiLtJ both 10.1069 0.2168 10.5352 9.6787
NZO/HlLtJ both 12.9434 0.2168 13.3717 12.5152
PWK/PhJ both 11.1744 0.2213 11.6114 10.7374
WSB/EiJ both 10.7458 0.2168 11.1741 10.3176




  GWAS USING LINEAR MIXED MODELS