Project measure / variable:   Reed2   spleen_wt

ID, description, units MPD:53156   spleen_wt   spleen weight   [g]  
Data set, strains Reed2   B6.129 and 129.B6 consomic w/par   9 strains     sex: both     age: 26wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Reed2 - spleen weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means0.0834   g 0.0770   g
Median of the strain means0.0800   g 0.0700   g
SD of the strain means± 0.0248 ± 0.0262
Coefficient of variation (CV)0.298 0.340
Min–max range of strain means0.0540   –   0.138   g 0.0515   –   0.134   g
Mean sample size per strain17.6   mice 16.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.006 0.006 19.5947 < 0.0001
strain 8 0.0945 0.0118 38.8967 < 0.0001
sex:strain 8 0.0146 0.0018 6.0224 < 0.0001
Residuals 275 0.0835 0.0003


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3.B6By-Chr1 f 0.0874 0.0191   19 0.00438 0.219 0.06, 0.13 0.16
129P3.B6By-Chr1 m 0.0705 0.0184   19 0.00422 0.261 0.05, 0.11 -0.25
129P3.B6By-Chr2 f 0.0825 0.015   4 0.0075 0.182 0.06, 0.09 -0.03
129P3.B6By-Chr2 m 0.134 0.0527   5 0.0236 0.393 0.06, 0.18 2.18
129P3.B6By-Chr7 f 0.054 0.0164   20 0.00366 0.303 0.01, 0.09 -1.18
129P3.B6By-Chr7 m 0.0515 0.0123   20 0.00274 0.238 0.03, 0.08 -0.97
129P3.B6By-Chr9 f 0.138 0.0222   9 0.00741 0.161 0.12, 0.18 2.2
129P3.B6By-Chr9 m 0.0991 0.0239   11 0.00719 0.241 0.07, 0.14 0.85
129P3/J f 0.08 0.0215   24 0.00438 0.268 0.04, 0.13 -0.14
129P3/J m 0.0614 0.0166   14 0.00443 0.27 0.03, 0.09 -0.6
B6By.129P3-Chr2 f 0.0687 0.0159   16 0.00397 0.231 0.04, 0.1 -0.59
B6By.129P3-Chr2 m 0.0627 0.0133   15 0.00345 0.213 0.04, 0.09 -0.55
B6By.129P3-Chr7 f 0.101 0.0201   20 0.0045 0.2 0.07, 0.15 0.71
B6By.129P3-Chr7 m 0.0874 0.0179   19 0.00411 0.205 0.06, 0.13 0.4
B6By.129P3-Chr9 f 0.0611 0.00963   18 0.00227 0.158 0.05, 0.08 -0.9
B6By.129P3-Chr9 m 0.0561 0.00916   18 0.00216 0.163 0.04, 0.08 -0.8
C57BL/6ByJ f 0.0776 0.00889   21 0.00194 0.115 0.06, 0.09 -0.23
C57BL/6ByJ m 0.07 0.0122   21 0.00267 0.175 0.05, 0.1 -0.27


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 f 0.0874 0.004 0.0952 0.0795
129P3.B6By-Chr1 m 0.0705 0.004 0.0784 0.0627
129P3.B6By-Chr2 f 0.0825 0.0087 0.0997 0.0653
129P3.B6By-Chr2 m 0.134 0.0078 0.1493 0.1187
129P3.B6By-Chr7 f 0.054 0.0039 0.0617 0.0463
129P3.B6By-Chr7 m 0.0515 0.0039 0.0592 0.0438
129P3.B6By-Chr9 f 0.1378 0.0058 0.1492 0.1263
129P3.B6By-Chr9 m 0.0991 0.0053 0.1094 0.0887
129P3/J f 0.08 0.0036 0.087 0.073
129P3/J m 0.0614 0.0047 0.0706 0.0523
B6By.129P3-Chr2 f 0.0687 0.0044 0.0773 0.0602
B6By.129P3-Chr2 m 0.0627 0.0045 0.0715 0.0538
B6By.129P3-Chr7 f 0.1005 0.0039 0.1082 0.0928
B6By.129P3-Chr7 m 0.0874 0.004 0.0952 0.0795
B6By.129P3-Chr9 f 0.0611 0.0041 0.0692 0.053
B6By.129P3-Chr9 m 0.0561 0.0041 0.0642 0.048
C57BL/6ByJ f 0.0776 0.0038 0.0851 0.0701
C57BL/6ByJ m 0.07 0.0038 0.0775 0.0625


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 both 0.0789 0.0028 0.0845 0.0734
129P3.B6By-Chr2 both 0.1082 0.0058 0.1198 0.0967
129P3.B6By-Chr7 both 0.0527 0.0028 0.0582 0.0473
129P3.B6By-Chr9 both 0.1184 0.0039 0.1261 0.1107
129P3/J both 0.0707 0.0029 0.0765 0.0649
B6By.129P3-Chr2 both 0.0657 0.0031 0.0719 0.0595
B6By.129P3-Chr7 both 0.0939 0.0028 0.0994 0.0884
B6By.129P3-Chr9 both 0.0586 0.0029 0.0643 0.0529
C57BL/6ByJ both 0.0738 0.0027 0.0791 0.0685




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA