Project measure / variable:   Reed2   liver_wt

ID, description, units MPD:53151   liver_wt   liver weight   [g]  
Data set, strains Reed2   B6.129 and 129.B6 consomic w/par   9 strains     sex: both     age: 26wks
Procedure organ weights
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  STRAIN COMPARISON PLOT
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Reed2 - liver weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means1.27   g 1.48   g
Median of the strain means1.21   g 1.39   g
SD of the strain means± 0.231 ± 0.312
Coefficient of variation (CV)0.182 0.211
Min–max range of strain means1.02   –   1.65   g 1.15   –   1.99   g
Mean sample size per strain17.7   mice 16.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4.3225 4.3225 125.3554 < 0.0001
strain 8 21.8247 2.7281 79.1159 < 0.0001
sex:strain 8 0.5635 0.0704 2.0427 0.0417
Residuals 275 9.4826 0.0345


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3.B6By-Chr1 f 1.09 0.121   19 0.0278 0.111 0.93, 1.33 -0.78
129P3.B6By-Chr1 m 1.32 0.157   19 0.0361 0.119 1.02, 1.55 -0.51
129P3.B6By-Chr2 f 1.21 0.225   4 0.113 0.187 0.97, 1.51 -0.26
129P3.B6By-Chr2 m 1.42 0.139   5 0.0622 0.0981 1.27, 1.64 -0.19
129P3.B6By-Chr7 f 1.07 0.104   19 0.0238 0.0968 0.91, 1.32 -0.86
129P3.B6By-Chr7 m 1.19 0.184   20 0.0412 0.154 0.67, 1.47 -0.93
129P3.B6By-Chr9 f 1.13 0.108   9 0.0359 0.0957 0.91, 1.3 -0.6
129P3.B6By-Chr9 m 1.26 0.182   10 0.0575 0.144 0.95, 1.59 -0.7
129P3/J f 1.02 0.121   24 0.0246 0.118 0.8, 1.29 -1.08
129P3/J m 1.15 0.136   12 0.0392 0.118 0.96, 1.37 -1.05
B6By.129P3-Chr2 f 1.26 0.174   16 0.0435 0.139 0.97, 1.59 -0.04
B6By.129P3-Chr2 m 1.39 0.173   15 0.0448 0.125 1.04, 1.64 -0.28
B6By.129P3-Chr7 f 1.65 0.299   20 0.0668 0.181 0.9, 2.1 1.65
B6By.129P3-Chr7 m 1.99 0.24   20 0.0537 0.121 1.46, 2.36 1.64
B6By.129P3-Chr9 f 1.39 0.229   20 0.0511 0.164 1.08, 1.9 0.52
B6By.129P3-Chr9 m 1.65 0.188   19 0.0431 0.114 1.23, 1.99 0.55
C57BL/6ByJ f 1.6 0.175   21 0.0382 0.11 1.3, 1.9 1.44
C57BL/6ByJ m 1.94 0.208   21 0.0454 0.107 1.55, 2.36 1.48


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 f 1.0926 0.0426 1.1765 1.0088
129P3.B6By-Chr1 m 1.3184 0.0426 1.4023 1.2346
129P3.B6By-Chr2 f 1.2075 0.0928 1.3903 1.0247
129P3.B6By-Chr2 m 1.418 0.083 1.5815 1.2545
129P3.B6By-Chr7 f 1.0705 0.0426 1.1544 0.9867
129P3.B6By-Chr7 m 1.1945 0.0415 1.2762 1.1128
129P3.B6By-Chr9 f 1.1256 0.0619 1.2474 1.0037
129P3.B6By-Chr9 m 1.263 0.0587 1.3786 1.1474
129P3/J f 1.0175 0.0379 1.0921 0.9429
129P3/J m 1.1492 0.0536 1.2547 1.0436
B6By.129P3-Chr2 f 1.2563 0.0464 1.3476 1.1649
B6By.129P3-Chr2 m 1.3887 0.0479 1.4831 1.2943
B6By.129P3-Chr7 f 1.6485 0.0415 1.7302 1.5668
B6By.129P3-Chr7 m 1.99 0.0415 2.0717 1.9083
B6By.129P3-Chr9 f 1.393 0.0415 1.4747 1.3113
B6By.129P3-Chr9 m 1.6463 0.0426 1.7302 1.5625
C57BL/6ByJ f 1.5957 0.0405 1.6755 1.5159
C57BL/6ByJ m 1.9395 0.0405 2.0193 1.8598


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 both 1.2055 0.0301 1.2648 1.1462
129P3.B6By-Chr2 both 1.3127 0.0623 1.4354 1.1901
129P3.B6By-Chr7 both 1.1325 0.0297 1.1911 1.074
129P3.B6By-Chr9 both 1.1943 0.0427 1.2783 1.1103
129P3/J both 1.0833 0.0328 1.148 1.0187
B6By.129P3-Chr2 both 1.3225 0.0334 1.3881 1.2568
B6By.129P3-Chr7 both 1.8193 0.0294 1.8771 1.7614
B6By.129P3-Chr9 both 1.5197 0.0297 1.5782 1.4611
C57BL/6ByJ both 1.7676 0.0287 1.824 1.7112




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA