Phenotype measure:   Reed2   retroperitoneal_fat

ID, description, units MPD:53115   retroperitoneal_fat   retroperitoneal fat pad weight   [g]
Data set, strains Reed2   B6.129 and 129.B6 consomic w/par   9 strains     sex: both     age: 26wks
Procedure fat pad weights
Ontology mappings

  STRAIN COMPARISON PLOT
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Reed2 - retroperitoneal fat pad weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means0.170   g 0.202   g
Median of the strain means0.173   g 0.183   g
SD of the strain means± 0.0693 ± 0.0510
Coefficient of variation (CV)0.407 0.253
Min–max range of strain means0.0672   –   0.276   g 0.116   –   0.283   g
Mean sample size per strain17.7   mice 16.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0664 0.0664 6.9679 0.0088
strain 8 0.7863 0.0983 10.3204 < 0.0001
sex:strain 8 0.2592 0.0324 3.4017 0.001
Residuals 277 2.6379 0.0095


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3.B6By-Chr1 f 0.0672 0.0205   18 0.00484 0.305 0.04, 0.11 -1.49
129P3.B6By-Chr1 m 0.116 0.0347   19 0.00796 0.3 0.04, 0.18 -1.68
129P3.B6By-Chr2 f 0.155 0.0311   4 0.0155 0.201 0.12, 0.19 -0.22
129P3.B6By-Chr2 m 0.23 0.066   5 0.0295 0.287 0.16, 0.31 0.55
129P3.B6By-Chr7 f 0.177 0.0959   20 0.0214 0.54 0.1
129P3.B6By-Chr7 m 0.177 0.0552   19 0.0127 0.311 0.04, 0.28 -0.49
129P3.B6By-Chr9 f 0.103 0.0542   10 0.0171 0.526 0.06, 0.24 -0.97
129P3.B6By-Chr9 m 0.175 0.0758   11 0.0229 0.432 0.05, 0.31 -0.53
129P3/J f 0.123 0.0617   24 0.0126 0.502 0.02, 0.28 -0.68
129P3/J m 0.173 0.105   14 0.0282 0.609 0.04, 0.38 -0.57
B6By.129P3-Chr2 f 0.265 0.106   15 0.0274 0.4 0.1, 0.45 1.37
B6By.129P3-Chr2 m 0.183 0.0774   15 0.02 0.422 0.07, 0.33 -0.37
B6By.129P3-Chr7 f 0.194 0.1   20 0.0224 0.517 0.04, 0.42 0.34
B6By.129P3-Chr7 m 0.283 0.119   20 0.0266 0.42 1.59
B6By.129P3-Chr9 f 0.276 0.134   20 0.03 0.486 0.04, 0.53 1.53
B6By.129P3-Chr9 m 0.222 0.155   19 0.0356 0.699 0.04, 0.57 0.39
C57BL/6ByJ f 0.173 0.117   21 0.0256 0.677 0.04, 0.41 0.04
C57BL/6ByJ m 0.258 0.121   21 0.0264 0.469 0.09, 0.52 1.1


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 f 0.0672 0.023 0.1125 0.0219
129P3.B6By-Chr1 m 0.1158 0.0224 0.1599 0.0717
129P3.B6By-Chr2 f 0.155 0.0488 0.2511 0.0589
129P3.B6By-Chr2 m 0.23 0.0436 0.3159 0.1441
129P3.B6By-Chr7 f 0.1775 0.0218 0.2205 0.1345
129P3.B6By-Chr7 m 0.1774 0.0224 0.2214 0.1333
129P3.B6By-Chr9 f 0.103 0.0309 0.1637 0.0423
129P3.B6By-Chr9 m 0.1755 0.0294 0.2334 0.1175
129P3/J f 0.1229 0.0199 0.1621 0.0837
129P3/J m 0.1729 0.0261 0.2242 0.1215
B6By.129P3-Chr2 f 0.2653 0.0252 0.3149 0.2157
B6By.129P3-Chr2 m 0.1833 0.0252 0.2329 0.1337
B6By.129P3-Chr7 f 0.1935 0.0218 0.2365 0.1505
B6By.129P3-Chr7 m 0.283 0.0218 0.326 0.24
B6By.129P3-Chr9 f 0.276 0.0218 0.319 0.233
B6By.129P3-Chr9 m 0.2216 0.0224 0.2657 0.1775
C57BL/6ByJ f 0.1733 0.0213 0.2153 0.1314
C57BL/6ByJ m 0.2576 0.0213 0.2995 0.2157


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 both 0.0915 0.016 0.1231 0.0599
129P3.B6By-Chr2 both 0.1925 0.0327 0.2569 0.1281
129P3.B6By-Chr7 both 0.1774 0.0156 0.2082 0.1467
129P3.B6By-Chr9 both 0.1392 0.0213 0.1812 0.0973
129P3/J both 0.1479 0.0164 0.1802 0.1156
B6By.129P3-Chr2 both 0.2243 0.0178 0.2594 0.1893
B6By.129P3-Chr7 both 0.2383 0.0154 0.2686 0.2079
B6By.129P3-Chr9 both 0.2488 0.0156 0.2796 0.218
C57BL/6ByJ both 0.2155 0.0151 0.2451 0.1858




GWAS analysis not available: At least 12 strains are required