Phenotype measure:   Reed2   mesenteric_fat

ID, description, units MPD:53113   mesenteric_fat   mesenteric fat pad weight   [g]
Data set, strains Reed2   B6.129 and 129.B6 consomic w/par   9 strains     sex: both     age: 26wks
Procedure fat pad weights
Ontology mappings

  STRAIN COMPARISON PLOT
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Reed2 - mesenteric fat pad weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means0.363   g 0.389   g
Median of the strain means0.364   g 0.382   g
SD of the strain means± 0.0473 ± 0.0696
Coefficient of variation (CV)0.130 0.179
Min–max range of strain means0.281   –   0.440   g 0.285   –   0.500   g
Mean sample size per strain18.0   mice 16.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0579 0.0579 4.3574 0.0378
strain 8 0.4837 0.0605 4.5468 < 0.0001
sex:strain 8 0.2523 0.0315 2.3713 0.0175
Residuals 280 3.7233 0.0133


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3.B6By-Chr1 f 0.281 0.0478   19 0.011 0.17 0.21, 0.39 -1.73
129P3.B6By-Chr1 m 0.353 0.0946   19 0.0217 0.268 0.18, 0.53 -0.51
129P3.B6By-Chr2 f 0.44 0.0762   4 0.0381 0.173 0.37, 0.52 1.63
129P3.B6By-Chr2 m 0.5 0.0791   5 0.0354 0.158 0.37, 0.58 1.6
129P3.B6By-Chr7 f 0.315 0.116   20 0.0259 0.368 0.08, 0.6 -1.01
129P3.B6By-Chr7 m 0.345 0.118   20 0.0264 0.342 0.04, 0.55 -0.63
129P3.B6By-Chr9 f 0.393 0.0648   10 0.0205 0.165 0.28, 0.48 0.64
129P3.B6By-Chr9 m 0.42 0.164   11 0.0493 0.389 0.21, 0.72 0.45
129P3/J f 0.336 0.0836   24 0.0171 0.248 0.18, 0.48 -0.57
129P3/J m 0.382 0.153   14 0.0409 0.4 0.15, 0.7 -0.09
B6By.129P3-Chr2 f 0.392 0.157   16 0.0393 0.401 0.09, 0.66 0.62
B6By.129P3-Chr2 m 0.285 0.126   15 0.0326 0.443 0.07, 0.46 -1.49
B6By.129P3-Chr7 f 0.384 0.104   20 0.0233 0.272 0.18, 0.59 0.45
B6By.129P3-Chr7 m 0.462 0.107   20 0.024 0.232 0.28, 0.67 1.06
B6By.129P3-Chr9 f 0.364 0.145   20 0.0324 0.398 0.13, 0.67 0.03
B6By.129P3-Chr9 m 0.322 0.133   19 0.0305 0.413 0.17, 0.62 -0.96
C57BL/6ByJ f 0.36 0.0836   21 0.0182 0.232 0.2, 0.5 -0.06
C57BL/6ByJ m 0.428 0.125   21 0.0274 0.293 0.16, 0.65 0.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 f 0.2811 0.0265 0.3331 0.229
129P3.B6By-Chr1 m 0.3526 0.0265 0.4047 0.3006
129P3.B6By-Chr2 f 0.44 0.0577 0.5535 0.3265
129P3.B6By-Chr2 m 0.5 0.0516 0.6015 0.3985
129P3.B6By-Chr7 f 0.315 0.0258 0.3658 0.2642
129P3.B6By-Chr7 m 0.345 0.0258 0.3958 0.2942
129P3.B6By-Chr9 f 0.393 0.0365 0.4648 0.3212
129P3.B6By-Chr9 m 0.42 0.0348 0.4884 0.3516
129P3/J f 0.3362 0.0235 0.3826 0.2899
129P3/J m 0.3821 0.0308 0.4428 0.3215
B6By.129P3-Chr2 f 0.3919 0.0288 0.4486 0.3351
B6By.129P3-Chr2 m 0.2853 0.0298 0.3439 0.2267
B6By.129P3-Chr7 f 0.3835 0.0258 0.4343 0.3327
B6By.129P3-Chr7 m 0.462 0.0258 0.5128 0.4112
B6By.129P3-Chr9 f 0.3635 0.0258 0.4143 0.3127
B6By.129P3-Chr9 m 0.3216 0.0265 0.3737 0.2695
C57BL/6ByJ f 0.3605 0.0252 0.41 0.3109
C57BL/6ByJ m 0.4276 0.0252 0.4772 0.3781


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 both 0.3168 0.0187 0.3537 0.28
129P3.B6By-Chr2 both 0.47 0.0387 0.5461 0.3939
129P3.B6By-Chr7 both 0.33 0.0182 0.3659 0.2941
129P3.B6By-Chr9 both 0.4065 0.0252 0.4561 0.3569
129P3/J both 0.3592 0.0194 0.3974 0.321
B6By.129P3-Chr2 both 0.3386 0.0207 0.3794 0.2978
B6By.129P3-Chr7 both 0.4227 0.0182 0.4586 0.3869
B6By.129P3-Chr9 both 0.3425 0.0185 0.3789 0.3062
C57BL/6ByJ both 0.394 0.0178 0.4291 0.359




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA