Phenotype measure:   Reed2   inguinal_fat

ID, description, units MPD:53112   inguinal_fat   inguinal fat pad weight   [g]
Data set, strains Reed2   B6.129 and 129.B6 consomic w/par   9 strains     sex: both     age: 26wks
Procedure fat pad weights
Ontology mappings

  STRAIN COMPARISON PLOT
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Reed2 - inguinal fat pad weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested9 strains9 strains
Mean of the strain means0.255   g 0.297   g
Median of the strain means0.246   g 0.296   g
SD of the strain means± 0.0493 ± 0.0347
Coefficient of variation (CV)0.194 0.117
Min–max range of strain means0.191   –   0.334   g 0.241   –   0.346   g
Mean sample size per strain18.0   mice 16.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.1223 0.1223 13.7163 0.0003
strain 8 0.1969 0.0246 2.76 0.006
sex:strain 8 0.2785 0.0348 3.9042 0.0002
Residuals 278 2.4785 0.0089


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3.B6By-Chr1 f 0.191 0.0412   19 0.00946 0.216 0.12, 0.28 -1.3
129P3.B6By-Chr1 m 0.241 0.0627   17 0.0152 0.26 0.14, 0.35 -1.63
129P3.B6By-Chr2 f 0.28 0.119   4 0.0593 0.424 0.14, 0.43 0.51
129P3.B6By-Chr2 m 0.346 0.109   5 0.0488 0.316 0.21, 0.49 1.4
129P3.B6By-Chr7 f 0.216 0.0668   20 0.0149 0.309 0.04, 0.3 -0.79
129P3.B6By-Chr7 m 0.34 0.0993   20 0.0222 0.292 0.09, 0.52 1.23
129P3.B6By-Chr9 f 0.22 0.0709   10 0.0224 0.322 0.1, 0.33 -0.71
129P3.B6By-Chr9 m 0.322 0.0933   11 0.0281 0.29 0.17, 0.5 0.71
129P3/J f 0.23 0.0702   24 0.0143 0.305 0.1, 0.36 -0.5
129P3/J m 0.296 0.0915   14 0.0244 0.309 0.11, 0.44 -0.04
B6By.129P3-Chr2 f 0.334 0.122   16 0.0306 0.366 0.12, 0.51 1.6
B6By.129P3-Chr2 m 0.276 0.0903   15 0.0233 0.327 0.13, 0.46 -0.62
B6By.129P3-Chr7 f 0.246 0.0941   20 0.021 0.382 0.07, 0.45 -0.18
B6By.129P3-Chr7 m 0.303 0.0644   20 0.0144 0.213 0.23, 0.48 0.16
B6By.129P3-Chr9 f 0.326 0.142   20 0.0318 0.436 0.13, 0.62 1.44
B6By.129P3-Chr9 m 0.264 0.117   19 0.0268 0.444 0.13, 0.65 -0.96
C57BL/6ByJ f 0.251 0.105   21 0.0229 0.419 0.13, 0.47 -0.08
C57BL/6ByJ m 0.289 0.108   21 0.0235 0.373 0.1, 0.43 -0.24


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 f 0.1911 0.0217 0.2337 0.1484
129P3.B6By-Chr1 m 0.2412 0.0229 0.2863 0.1961
129P3.B6By-Chr2 f 0.28 0.0472 0.3729 0.1871
129P3.B6By-Chr2 m 0.346 0.0422 0.4291 0.2629
129P3.B6By-Chr7 f 0.216 0.0211 0.2576 0.1744
129P3.B6By-Chr7 m 0.3405 0.0211 0.3821 0.2989
129P3.B6By-Chr9 f 0.22 0.0299 0.2788 0.1612
129P3.B6By-Chr9 m 0.3218 0.0285 0.3779 0.2658
129P3/J f 0.2304 0.0193 0.2684 0.1925
129P3/J m 0.2964 0.0252 0.3461 0.2468
B6By.129P3-Chr2 f 0.3344 0.0236 0.3808 0.2879
B6By.129P3-Chr2 m 0.276 0.0244 0.324 0.228
B6By.129P3-Chr7 f 0.246 0.0211 0.2876 0.2044
B6By.129P3-Chr7 m 0.3025 0.0211 0.3441 0.2609
B6By.129P3-Chr9 f 0.3255 0.0211 0.3671 0.2839
B6By.129P3-Chr9 m 0.2637 0.0217 0.3063 0.221
C57BL/6ByJ f 0.251 0.0206 0.2915 0.2104
C57BL/6ByJ m 0.289 0.0206 0.3296 0.2485


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129P3.B6By-Chr1 both 0.2161 0.0158 0.2471 0.1851
129P3.B6By-Chr2 both 0.313 0.0317 0.3753 0.2507
129P3.B6By-Chr7 both 0.2782 0.0149 0.3076 0.2489
129P3.B6By-Chr9 both 0.2709 0.0206 0.3115 0.2303
129P3/J both 0.2634 0.0159 0.2947 0.2322
B6By.129P3-Chr2 both 0.3052 0.017 0.3386 0.2718
B6By.129P3-Chr7 both 0.2742 0.0149 0.3036 0.2449
B6By.129P3-Chr9 both 0.2946 0.0151 0.3244 0.2648
C57BL/6ByJ both 0.27 0.0146 0.2987 0.2413




GWAS analysis not available: At least 12 strains are required