Phenotype measure:   HMDPpheno9   OGPI

ID, description, units MPD:50428   OGPI   liver 1-oleoylglycerophosphoinositol (16h fast), relative abundance  
Data set, strains HMDPpheno9   HMDP   100 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno9 - liver 1-oleoylglycerophosphoinositol (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested100 strains
Mean of the strain means109029   None
Median of the strain means103056   None
SD of the strain means± 51336
Coefficient of variation (CV)0.471
Min–max range of strain means32129   –   281495   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 18 142163661193.031 7897981177.3906 0.9861 0.5004
Residuals 28 224250661689.209 8008952203.186


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 145041.0 0.0   1   0.0 0.0 145041.0, 145041.0 0.7
A/J m 91908.0 0.0   1   0.0 0.0 91908.0, 91908.0 -0.33
AKR/J m 116580.0 0.0   1   0.0 0.0 116580.0, 116580.0 0.15
AXB10/PgnJ m 115486.0 0.0   1   0.0 0.0 115486.0, 115486.0 0.13
AXB12/PgnJ m 56847.0 0.0   1   0.0 0.0 56847.0, 56847.0 -1.02
AXB15/PgnJ m 80398.0 0.0   1   0.0 0.0 80398.0, 80398.0 -0.56
AXB19a/PgnJ m 78440.0 0.0   1   0.0 0.0 78440.0, 78440.0 -0.6
AXB19b/PgnJ m 226522.0 244533.0   2   172911.0 1.08 53611.0, 399434.0 2.29
AXB23/PgnJ m 186048.0 0.0   1   0.0 0.0 186048.0, 186048.0 1.5
AXB24/PgnJ m 87829.0 37659.0   2   26629.0 0.429 61200.0, 114458.0 -0.41
AXB2/PgnJ m 103372.0 0.0   1   0.0 0.0 103372.0, 103372.0 -0.11
AXB4/PgnJ m 137068.0 0.0   1   0.0 0.0 137068.0, 137068.0 0.55
AXB5/PgnJ m 85003.0 0.0   1   0.0 0.0 85003.0, 85003.0 -0.47
AXB8/PgnJ m 109891.0 0.0   1   0.0 0.0 109891.0, 109891.0 0.02
BALB/cJ m 65998.0 0.0   1   0.0 0.0 65998.0, 65998.0 -0.84
BTBR T+ Itpr3tf/J m 50331.0 0.0   1   0.0 0.0 50331.0, 50331.0 -1.14
BUB/BnJ m 115239.0 0.0   1   0.0 0.0 115239.0, 115239.0 0.12
BXA11/PgnJ m 160266.0 0.0   1   0.0 0.0 160266.0, 160266.0 1.0
BXA12/PgnJ m 140439.0 0.0   1   0.0 0.0 140439.0, 140439.0 0.61
BXA14/PgnJ m 135666.0 0.0   1   0.0 0.0 135666.0, 135666.0 0.52
BXA16/PgnJ m 102248.0 19543.0   2   13819.0 0.191 88430.0, 116067.0 -0.13
BXA1/PgnJ m 280600.0 0.0   1   0.0 0.0 280600.0, 280600.0 3.34
BXA24/PgnJ m 100669.0 0.0   1   0.0 0.0 100669.0, 100669.0 -0.16
BXA25/PgnJ m 101338.0 0.0   1   0.0 0.0 101338.0, 101338.0 -0.15
BXA26/PgnJ m 281495.0 0.0   1   0.0 0.0 281495.0, 281495.0 3.36
BXA2/PgnJ m 56389.0 0.0   1   0.0 0.0 56389.0, 56389.0 -1.03
BXA4/PgnJ m 105390.0 0.0   1   0.0 0.0 105390.0, 105390.0 -0.07
BXA7/PgnJ m 90685.0 0.0   1   0.0 0.0 90685.0, 90685.0 -0.36
BXA8/PgnJ m 187006.0 0.0   1   0.0 0.0 187006.0, 187006.0 1.52
BXD11/TyJ m 87991.0 0.0   1   0.0 0.0 87991.0, 87991.0 -0.41
BXD12/TyJ m 71801.0 0.0   1   0.0 0.0 71801.0, 71801.0 -0.73
BXD13/TyJ m 74172.0 0.0   1   0.0 0.0 74172.0, 74172.0 -0.68
BXD14/TyJ m 37032.0 0.0   1   0.0 0.0 37032.0, 37032.0 -1.4
BXD18/TyJ m 115018.0 0.0   1   0.0 0.0 115018.0, 115018.0 0.12
BXD19/TyJ m 115420.0 0.0   1   0.0 0.0 115420.0, 115420.0 0.12
BXD1/TyJ m 60939.0 0.0   1   0.0 0.0 60939.0, 60939.0 -0.94
BXD20/TyJ m 60107.0 0.0   1   0.0 0.0 60107.0, 60107.0 -0.95
BXD21/TyJ m 120403.0 0.0   1   0.0 0.0 120403.0, 120403.0 0.22
BXD22/TyJ m 109936.0 0.0   1   0.0 0.0 109936.0, 109936.0 0.02
BXD24/TyJ m 102070.0 0.0   1   0.0 0.0 102070.0, 102070.0 -0.14
BXD24/TyJ-Cep290rd16/J m 53923.0 0.0   1   0.0 0.0 53923.0, 53923.0 -1.07
BXD28/TyJ m 91213.0 9505.0   2   6721.0 0.104 84492.0, 97935.0 -0.35
BXD29-Tlr4lps-2J/J m 112811.0 0.0   1   0.0 0.0 112811.0, 112811.0 0.07
BXD2/TyJ m 279577.0 0.0   1   0.0 0.0 279577.0, 279577.0 3.32
BXD32/TyJ m 108849.0 0.0   1   0.0 0.0 108849.0, 108849.0 0.0
BXD33/TyJ m 56677.0 0.0   1   0.0 0.0 56677.0, 56677.0 -1.02
BXD34/TyJ m 105084.0 0.0   1   0.0 0.0 105084.0, 105084.0 -0.08
BXD36/TyJ m 69628.0 0.0   1   0.0 0.0 69628.0, 69628.0 -0.77
BXD38/TyJ m 150399.0 0.0   1   0.0 0.0 150399.0, 150399.0 0.81
BXD39/TyJ m 115722.0 0.0   1   0.0 0.0 115722.0, 115722.0 0.13
BXD40/TyJ m 97748.0 0.0   1   0.0 0.0 97748.0, 97748.0 -0.22
BXD42/TyJ m 122853.0 0.0   1   0.0 0.0 122853.0, 122853.0 0.27
BXD5/TyJ m 73471.0 0.0   1   0.0 0.0 73471.0, 73471.0 -0.69
BXD6/TyJ m 163593.0 0.0   1   0.0 0.0 163593.0, 163593.0 1.06
BXD8/TyJ m 126395.0 0.0   1   0.0 0.0 126395.0, 126395.0 0.34
BXD9/TyJ m 58975.0 0.0   1   0.0 0.0 58975.0, 58975.0 -0.98
BXH10/TyJ m 32129.0 0.0   1   0.0 0.0 32129.0, 32129.0 -1.5
BXH19/TyJ m 199037.0 0.0   1   0.0 0.0 199037.0, 199037.0 1.75
BXH20/KccJ m 117095.0 0.0   1   0.0 0.0 117095.0, 117095.0 0.16
BXH22/KccJ m 165071.0 0.0   1   0.0 0.0 165071.0, 165071.0 1.09
BXH2/TyJ m 83262.0 0.0   1   0.0 0.0 83262.0, 83262.0 -0.5
BXH4/TyJ m 53367.0 11091.0   2   7842.0 0.208 45525.0, 61210.0 -1.08
BXH6/TyJ m 139311.0 0.0   1   0.0 0.0 139311.0, 139311.0 0.59
BXH7/TyJ m 102739.0 0.0   1   0.0 0.0 102739.0, 102739.0 -0.12
BXH8/TyJ m 109345.0 0.0   1   0.0 0.0 109345.0, 109345.0 0.01
BXH9/TyJ m 169386.0 0.0   1   0.0 0.0 169386.0, 169386.0 1.18
C3H/HeJ m 72034.0 28852.0   2   20402.0 0.401 51632.0, 92435.0 -0.72
C57BL/6J m 166107.0 84707.0   4 42353.0 0.51 59916.0, 266976.0 1.11
C57L/J m 165321.0 0.0   1   0.0 0.0 165321.0, 165321.0 1.1
C58/J m 63583.0 0.0   1   0.0 0.0 63583.0, 63583.0 -0.89
CAST/EiJ m 59405.0 0.0   1   0.0 0.0 59405.0, 59405.0 -0.97
CBA/J m 106414.0 0.0   1   0.0 0.0 106414.0, 106414.0 -0.05
CE/J m 51281.0 0.0   1   0.0 0.0 51281.0, 51281.0 -1.12
CXB11/HiAJ m 108427.0 4178.0   2   2954.0 0.0385 105473.0, 111382.0 -0.01
CXB12/HiAJ m 70867.0 28824.0   2   20381.0 0.407 50485.0, 91248.0 -0.74
CXB13/HiAJ m 108704.0 12461.0   3 7194.0 0.115 100015.0, 122981.0 -0.01
CXB1/ByJ m 134174.0 54623.0   3 31537.0 0.407 93174.0, 196182.0 0.49
CXB2/ByJ m 106745.0 4517.0   2   3194.0 0.0423 103551.0, 109939.0 -0.04
CXB3/ByJ m 84949.0 18483.0   2   13070.0 0.218 71879.0, 98018.0 -0.47
CXB4/ByJ m 123581.0 103701.0   2   73327.0 0.839 50253.0, 196908.0 0.28
CXB6/ByJ m 101498.0 15314.0   3 8842.0 0.151 84270.0, 113567.0 -0.15
CXB7/ByJ m 84523.0 47840.0   2   33828.0 0.566 50695.0, 118350.0 -0.48
CXB8/HiAJ m 261999.0 241684.0   3 139536.0 0.922 100291.0, 539828.0 2.98
CXB9/HiAJ m 108143.0 19372.0   3 11185.0 0.179 96955.0, 130513.0 -0.02
DBA/2J m 47990.0 22434.0   4 11217.0 0.467 28778.0, 73693.0 -1.19
FVB/NJ m 61442.0 0.0   1   0.0 0.0 61442.0, 61442.0 -0.93
I/LnJ m 71443.0 0.0   1   0.0 0.0 71443.0, 71443.0 -0.73
KK/HlJ m 88023.0 0.0   1   0.0 0.0 88023.0, 88023.0 -0.41
LG/J m 66261.0 0.0   1   0.0 0.0 66261.0, 66261.0 -0.83
LP/J m 57313.0 0.0   1   0.0 0.0 57313.0, 57313.0 -1.01
MA/MyJ m 124420.0 0.0   1   0.0 0.0 124420.0, 124420.0 0.3
NOD/ShiLtJ m 148651.0 0.0   1   0.0 0.0 148651.0, 148651.0 0.77
NON/ShiLtJ m 106519.0 0.0   1   0.0 0.0 106519.0, 106519.0 -0.05
NZW/LacJ m 52864.0 0.0   1   0.0 0.0 52864.0, 52864.0 -1.09
PL/J m 83275.0 0.0   1   0.0 0.0 83275.0, 83275.0 -0.5
RIIIS/J m 67220.0 0.0   1   0.0 0.0 67220.0, 67220.0 -0.81
SEA/GnJ m 146390.0 0.0   1   0.0 0.0 146390.0, 146390.0 0.73
SJL/J m 68079.0 0.0   1   0.0 0.0 68079.0, 68079.0 -0.8
SM/J m 65168.0 0.0   1   0.0 0.0 65168.0, 65168.0 -0.85
SWR/J m 163350.0 0.0   1   0.0 0.0 163350.0, 163350.0 1.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB19b/PgnJ m 226522.5 63280.93 356147.609 96897.391
AXB24/PgnJ m 87829.0 63280.93 217454.109 0.0
BXA16/PgnJ m 102248.15 63280.93 231873.259 0.0
BXD28/TyJ m 91213.4 63280.93 220838.509 0.0
BXH4/TyJ m 53367.1 63280.93 182992.209 0.0
C3H/HeJ m 72033.85 63280.93 201658.959 0.0
C57BL/6J m 166107.475 44746.3747 257766.2686 74448.6814
CXB11/HiAJ m 108427.4 63280.93 238052.509 0.0
CXB12/HiAJ m 70866.85 63280.93 200491.959 0.0
CXB13/HiAJ m 108704.3 51668.663 214542.7583 2865.8417
CXB1/ByJ m 134173.6333 51668.663 240012.0916 28335.1751
CXB2/ByJ m 106744.9 63280.93 236370.009 0.0
CXB3/ByJ m 84948.7 63280.93 214573.809 0.0
CXB4/ByJ m 123580.7 63280.93 253205.809 0.0
CXB6/ByJ m 101498.3 51668.663 207336.7583 0.0
CXB7/ByJ m 84522.55 63280.93 214147.659 0.0
CXB8/HiAJ m 261999.1 51668.663 367837.5583 156160.6417
CXB9/HiAJ m 108143.2667 51668.663 213981.7249 2304.8084
DBA/2J m 47990.025 44746.3747 139648.8186 0.0




  GWAS USING LINEAR MIXED MODELS