Phenotype measure:   HMDPpheno9   LGPEA_1

ID, description, units MPD:50425   LGPEA_1   liver 1-linoleoylglycerophosphoethanolamine (16h fast), relative abundance  
Data set, strains HMDPpheno9   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno9 - liver 1-linoleoylglycerophosphoethanolamine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means79324   None
Median of the strain means79311   None
SD of the strain means± 30377
Coefficient of variation (CV)0.383
Min–max range of strain means16516   –   213223   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 35562215420.1906 1693438829.5329 1.1534 0.3471
Residuals 34 49917655860.1687 1468166348.8285


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 101477.0 0.0   1   0.0 0.0 101477.0, 101477.0 0.73
A/J m 40940.0 24868.0   2   17584.0 0.607 23356.0, 58524.0 -1.26
AKR/J m 78479.0 0.0   1   0.0 0.0 78479.0, 78479.0 -0.03
AXB10/PgnJ m 91395.0 0.0   1   0.0 0.0 91395.0, 91395.0 0.4
AXB12/PgnJ m 74648.0 0.0   1   0.0 0.0 74648.0, 74648.0 -0.15
AXB13/PgnJ m 70451.0 0.0   1   0.0 0.0 70451.0, 70451.0 -0.29
AXB15/PgnJ m 104790.0 0.0   1   0.0 0.0 104790.0, 104790.0 0.84
AXB19a/PgnJ m 66510.0 0.0   1   0.0 0.0 66510.0, 66510.0 -0.42
AXB19b/PgnJ m 47745.0 2168.0   2   1533.0 0.0454 46211.0, 49278.0 -1.04
AXB19/PgnJ m 121262.0 0.0   1   0.0 0.0 121262.0, 121262.0 1.38
AXB1/PgnJ m 45860.0 0.0   1   0.0 0.0 45860.0, 45860.0 -1.1
AXB23/PgnJ m 100424.0 0.0   1   0.0 0.0 100424.0, 100424.0 0.69
AXB24/PgnJ m 97589.0 2538.0   2   1794.0 0.026 95794.0, 99383.0 0.6
AXB2/PgnJ m 83162.0 0.0   1   0.0 0.0 83162.0, 83162.0 0.13
AXB4/PgnJ m 56548.0 0.0   1   0.0 0.0 56548.0, 56548.0 -0.75
AXB5/PgnJ m 83925.0 0.0   1   0.0 0.0 83925.0, 83925.0 0.15
AXB6/PgnJ m 69212.0 0.0   1   0.0 0.0 69212.0, 69212.0 -0.33
AXB8/PgnJ m 91462.0 0.0   1   0.0 0.0 91462.0, 91462.0 0.4
BALB/cJ m 59191.0 13929.0   3 8042.0 0.235 48132.0, 74834.0 -0.66
BTBR T+ Itpr3tf/J m 37364.0 0.0   1   0.0 0.0 37364.0, 37364.0 -1.38
BUB/BnJ m 131100.0 0.0   1   0.0 0.0 131100.0, 131100.0 1.7
BXA11/PgnJ m 127738.0 0.0   1   0.0 0.0 127738.0, 127738.0 1.59
BXA12/PgnJ m 55753.0 0.0   1   0.0 0.0 55753.0, 55753.0 -0.78
BXA13/PgnJ m 56035.0 0.0   1   0.0 0.0 56035.0, 56035.0 -0.77
BXA14/PgnJ m 46264.0 0.0   1   0.0 0.0 46264.0, 46264.0 -1.09
BXA16/PgnJ m 59810.0 28338.0   2   20038.0 0.474 39772.0, 79848.0 -0.64
BXA1/PgnJ m 112612.0 0.0   1   0.0 0.0 112612.0, 112612.0 1.1
BXA24/PgnJ m 80005.0 0.0   1   0.0 0.0 80005.0, 80005.0 0.02
BXA25/PgnJ m 70244.0 0.0   1   0.0 0.0 70244.0, 70244.0 -0.3
BXA26/PgnJ m 213223.0 0.0   1   0.0 0.0 213223.0, 213223.0 4.41
BXA2/PgnJ m 80642.0 0.0   1   0.0 0.0 80642.0, 80642.0 0.04
BXA4/PgnJ m 16516.0 0.0   1   0.0 0.0 16516.0, 16516.0 -2.07
BXA7/PgnJ m 64860.0 0.0   1   0.0 0.0 64860.0, 64860.0 -0.48
BXA8/PgnJ m 91659.0 0.0   1   0.0 0.0 91659.0, 91659.0 0.41
BXD11/TyJ m 79411.0 0.0   1   0.0 0.0 79411.0, 79411.0 0.0
BXD12/TyJ m 101952.0 0.0   1   0.0 0.0 101952.0, 101952.0 0.74
BXD13/TyJ m 79413.0 0.0   1   0.0 0.0 79413.0, 79413.0 0.0
BXD14/TyJ m 58131.0 0.0   1   0.0 0.0 58131.0, 58131.0 -0.7
BXD15/TyJ m 108207.0 0.0   1   0.0 0.0 108207.0, 108207.0 0.95
BXD18/TyJ m 93547.0 0.0   1   0.0 0.0 93547.0, 93547.0 0.47
BXD19/TyJ m 97905.0 40530.0   2   28659.0 0.414 69246.0, 126564.0 0.61
BXD1/TyJ m 94581.0 0.0   1   0.0 0.0 94581.0, 94581.0 0.5
BXD20/TyJ m 56052.0 0.0   1   0.0 0.0 56052.0, 56052.0 -0.77
BXD21/TyJ m 69266.0 0.0   1   0.0 0.0 69266.0, 69266.0 -0.33
BXD22/TyJ m 72499.0 0.0   1   0.0 0.0 72499.0, 72499.0 -0.22
BXD24/TyJ m 79211.0 0.0   1   0.0 0.0 79211.0, 79211.0 0.0
BXD24/TyJ-Cep290rd16/J m 31229.0 0.0   1   0.0 0.0 31229.0, 31229.0 -1.58
BXD28/TyJ m 92050.0 15666.0   2   11078.0 0.17 80972.0, 103128.0 0.42
BXD29-Tlr4lps-2J/J m 122792.0 0.0   1   0.0 0.0 122792.0, 122792.0 1.43
BXD2/TyJ m 69119.0 0.0   1   0.0 0.0 69119.0, 69119.0 -0.34
BXD32/TyJ m 113657.0 0.0   1   0.0 0.0 113657.0, 113657.0 1.13
BXD33/TyJ m 56100.0 0.0   1   0.0 0.0 56100.0, 56100.0 -0.76
BXD34/TyJ m 88234.0 0.0   1   0.0 0.0 88234.0, 88234.0 0.29
BXD36/TyJ m 58858.0 0.0   1   0.0 0.0 58858.0, 58858.0 -0.67
BXD38/TyJ m 91673.0 0.0   1   0.0 0.0 91673.0, 91673.0 0.41
BXD39/TyJ m 43806.0 0.0   1   0.0 0.0 43806.0, 43806.0 -1.17
BXD40/TyJ m 120144.0 0.0   1   0.0 0.0 120144.0, 120144.0 1.34
BXD42/TyJ m 59928.0 0.0   1   0.0 0.0 59928.0, 59928.0 -0.64
BXD5/TyJ m 82492.0 0.0   1   0.0 0.0 82492.0, 82492.0 0.1
BXD6/TyJ m 41570.0 0.0   1   0.0 0.0 41570.0, 41570.0 -1.24
BXD8/TyJ m 107231.0 0.0   1   0.0 0.0 107231.0, 107231.0 0.92
BXD9/TyJ m 59133.0 0.0   1   0.0 0.0 59133.0, 59133.0 -0.66
BXH10/TyJ m 57422.0 0.0   1   0.0 0.0 57422.0, 57422.0 -0.72
BXH19/TyJ m 35894.0 0.0   1   0.0 0.0 35894.0, 35894.0 -1.43
BXH20/KccJ m 67057.0 0.0   1   0.0 0.0 67057.0, 67057.0 -0.4
BXH22/KccJ m 99422.0 0.0   1   0.0 0.0 99422.0, 99422.0 0.66
BXH2/TyJ m 80102.0 0.0   1   0.0 0.0 80102.0, 80102.0 0.03
BXH4/TyJ m 60104.0 20705.0   2   14641.0 0.344 45463.0, 74744.0 -0.63
BXH6/TyJ m 78057.0 0.0   1   0.0 0.0 78057.0, 78057.0 -0.04
BXH7/TyJ m 39155.0 0.0   1   0.0 0.0 39155.0, 39155.0 -1.32
BXH8/TyJ m 62422.0 0.0   1   0.0 0.0 62422.0, 62422.0 -0.56
BXH9/TyJ m 80204.0 0.0   1   0.0 0.0 80204.0, 80204.0 0.03
C3H/HeJ m 59753.0 49125.0   2   34736.0 0.822 25016.0, 94489.0 -0.64
C57BL/6J m 118183.0 59593.0   5 26651.0 0.504 38111.0, 201606.0 1.28
C57L/J m 93927.0 0.0   1   0.0 0.0 93927.0, 93927.0 0.48
C58/J m 32047.0 0.0   1   0.0 0.0 32047.0, 32047.0 -1.56
CAST/EiJ m 46222.0 0.0   1   0.0 0.0 46222.0, 46222.0 -1.09
CBA/J m 69708.0 0.0   1   0.0 0.0 69708.0, 69708.0 -0.32
CE/J m 67748.0 0.0   1   0.0 0.0 67748.0, 67748.0 -0.38
CXB11/HiAJ m 104934.0 35858.0   2   25356.0 0.342 79578.0, 130290.0 0.84
CXB12/HiAJ m 112994.0 20467.0   2   14473.0 0.181 98522.0, 127467.0 1.11
CXB13/HiAJ m 98733.0 40528.0   3 23399.0 0.41 73329.0, 145471.0 0.64
CXB1/ByJ m 119805.0 31856.0   3 18392.0 0.266 87364.0, 151043.0 1.33
CXB2/ByJ m 95841.0 14877.0   3 8589.0 0.155 79751.0, 109098.0 0.54
CXB3/ByJ m 116213.0 4637.0   2   3279.0 0.0399 112934.0, 119492.0 1.21
CXB4/ByJ m 86227.0 8417.0   2   5952.0 0.0976 80275.0, 92179.0 0.23
CXB6/ByJ m 92642.0 53172.0   3 30699.0 0.574 45603.0, 150334.0 0.44
CXB7/ByJ m 81474.0 5473.0   2   3870.0 0.0672 77604.0, 85344.0 0.07
CXB8/HiAJ m 129019.0 81248.0   3 46908.0 0.63 81129.0, 222829.0 1.64
CXB9/HiAJ m 125147.0 20242.0   3 11687.0 0.162 106533.0, 146697.0 1.51
DBA/2J m 77168.0 25171.0   4 12586.0 0.326 40240.0, 96800.0 -0.07
FVB/NJ m 38188.0 0.0   1   0.0 0.0 38188.0, 38188.0 -1.35
I/LnJ m 41663.0 0.0   1   0.0 0.0 41663.0, 41663.0 -1.24
KK/HlJ m 147884.0 0.0   1   0.0 0.0 147884.0, 147884.0 2.26
LG/J m 31603.0 0.0   1   0.0 0.0 31603.0, 31603.0 -1.57
LP/J m 22137.0 0.0   1   0.0 0.0 22137.0, 22137.0 -1.88
MA/MyJ m 79066.0 0.0   1   0.0 0.0 79066.0, 79066.0 -0.01
NOD/ShiLtJ m 126403.0 0.0   1   0.0 0.0 126403.0, 126403.0 1.55
NON/ShiLtJ m 58632.0 0.0   1   0.0 0.0 58632.0, 58632.0 -0.68
NZW/LacJ m 92360.0 0.0   1   0.0 0.0 92360.0, 92360.0 0.43
PL/J m 89604.0 0.0   1   0.0 0.0 89604.0, 89604.0 0.34
RIIIS/J m 44165.0 0.0   1   0.0 0.0 44165.0, 44165.0 -1.16
SEA/GnJ m 79649.0 0.0   1   0.0 0.0 79649.0, 79649.0 0.01
SJL/J m 55559.0 0.0   1   0.0 0.0 55559.0, 55559.0 -0.78
SM/J m 76345.0 0.0   1   0.0 0.0 76345.0, 76345.0 -0.1
SWR/J m 80398.0 0.0   1   0.0 0.0 80398.0, 80398.0 0.04


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 40939.8 27093.9693 96001.3704 0.0
AXB19b/PgnJ m 47744.55 27093.9693 102806.1204 0.0
AXB24/PgnJ m 97588.65 27093.9693 152650.2204 42527.0796
BALB/cJ m 59190.6333 22122.1333 104148.2173 14233.0493
BXA16/PgnJ m 59810.15 27093.9693 114871.7204 4748.5796
BXD19/TyJ m 97905.05 27093.9693 152966.6204 42843.4796
BXD28/TyJ m 92050.0 27093.9693 147111.5704 36988.4296
BXH4/TyJ m 60103.55 27093.9693 115165.1204 5041.9796
C3H/HeJ m 59752.85 27093.9693 114814.4204 4691.2796
C57BL/6J m 118183.16 17135.7308 153007.1548 83359.1652
CXB11/HiAJ m 104934.15 27093.9693 159995.7204 49872.5796
CXB12/HiAJ m 112994.35 27093.9693 168055.9204 57932.7796
CXB13/HiAJ m 98732.8 22122.1333 143690.384 53775.216
CXB1/ByJ m 119805.2333 22122.1333 164762.8173 74847.6493
CXB2/ByJ m 95840.8667 22122.1333 140798.4507 50883.2827
CXB3/ByJ m 116213.15 27093.9693 171274.7204 61151.5796
CXB4/ByJ m 86227.05 27093.9693 141288.6204 31165.4796
CXB6/ByJ m 92641.6 22122.1333 137599.184 47684.016
CXB7/ByJ m 81474.4 27093.9693 136535.9704 26412.8296
CXB8/HiAJ m 129018.9 22122.1333 173976.484 84061.316
CXB9/HiAJ m 125146.5667 22122.1333 170104.1507 80188.9827
DBA/2J m 77167.8 19158.3294 116102.2098 38233.3902




  GWAS USING LINEAR MIXED MODELS