Project measure / variable:   HMDPpheno9   AGPEA

ID, description, units MPD:50423   AGPEA   liver 1-arachidonoylglycerophosphoethanolamine (16h fast), relative abundance    
Data set, strains HMDPpheno9   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno9 - liver 1-arachidonoylglycerophosphoethanolamine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means157513   None
Median of the strain means141092   None
SD of the strain means± 78108
Coefficient of variation (CV)0.496
Min–max range of strain means30717   –   661767   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 228929157763.684 10901388464.9373 1.3607 0.2071
Residuals 34 272396524321.413 8011662480.0416


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 130776.0 0.0   1   0.0 0.0 130776.0, 130776.0 -0.34
A/J m 89374.0 79665.0   2   56332.0 0.891 33042.0, 145705.0 -0.87
AKR/J m 147442.0 0.0   1   0.0 0.0 147442.0, 147442.0 -0.13
AXB10/PgnJ m 166750.0 0.0   1   0.0 0.0 166750.0, 166750.0 0.12
AXB12/PgnJ m 207961.0 0.0   1   0.0 0.0 207961.0, 207961.0 0.65
AXB13/PgnJ m 140735.0 0.0   1   0.0 0.0 140735.0, 140735.0 -0.21
AXB15/PgnJ m 215487.0 0.0   1   0.0 0.0 215487.0, 215487.0 0.74
AXB19a/PgnJ m 168780.0 0.0   1   0.0 0.0 168780.0, 168780.0 0.14
AXB19b/PgnJ m 102234.0 25758.0   2   18214.0 0.252 84020.0, 120448.0 -0.71
AXB19/PgnJ m 217181.0 0.0   1   0.0 0.0 217181.0, 217181.0 0.76
AXB1/PgnJ m 90341.0 0.0   1   0.0 0.0 90341.0, 90341.0 -0.86
AXB23/PgnJ m 318227.0 0.0   1   0.0 0.0 318227.0, 318227.0 2.06
AXB24/PgnJ m 196817.0 36999.0   2   26162.0 0.188 170655.0, 222979.0 0.5
AXB2/PgnJ m 179244.0 0.0   1   0.0 0.0 179244.0, 179244.0 0.28
AXB4/PgnJ m 139833.0 0.0   1   0.0 0.0 139833.0, 139833.0 -0.23
AXB5/PgnJ m 121776.0 0.0   1   0.0 0.0 121776.0, 121776.0 -0.46
AXB6/PgnJ m 236807.0 0.0   1   0.0 0.0 236807.0, 236807.0 1.02
AXB8/PgnJ m 190363.0 0.0   1   0.0 0.0 190363.0, 190363.0 0.42
BALB/cJ m 176880.0 32223.0   3 18604.0 0.182 142120.0, 205755.0 0.25
BTBR T+ Itpr3tf/J m 71842.0 0.0   1   0.0 0.0 71842.0, 71842.0 -1.1
BUB/BnJ m 229591.0 0.0   1   0.0 0.0 229591.0, 229591.0 0.92
BXA11/PgnJ m 205303.0 0.0   1   0.0 0.0 205303.0, 205303.0 0.61
BXA12/PgnJ m 108371.0 0.0   1   0.0 0.0 108371.0, 108371.0 -0.63
BXA13/PgnJ m 225138.0 0.0   1   0.0 0.0 225138.0, 225138.0 0.87
BXA14/PgnJ m 85793.0 0.0   1   0.0 0.0 85793.0, 85793.0 -0.92
BXA16/PgnJ m 118915.0 48649.0   2   34400.0 0.409 84515.0, 153315.0 -0.49
BXA1/PgnJ m 270954.0 0.0   1   0.0 0.0 270954.0, 270954.0 1.45
BXA24/PgnJ m 268822.0 0.0   1   0.0 0.0 268822.0, 268822.0 1.43
BXA25/PgnJ m 107574.0 0.0   1   0.0 0.0 107574.0, 107574.0 -0.64
BXA26/PgnJ m 661767.0 0.0   1   0.0 0.0 661767.0, 661767.0 6.46
BXA2/PgnJ m 121072.0 0.0   1   0.0 0.0 121072.0, 121072.0 -0.47
BXA4/PgnJ m 30717.0 0.0   1   0.0 0.0 30717.0, 30717.0 -1.62
BXA7/PgnJ m 158189.0 0.0   1   0.0 0.0 158189.0, 158189.0 0.01
BXA8/PgnJ m 151897.0 0.0   1   0.0 0.0 151897.0, 151897.0 -0.07
BXD11/TyJ m 122216.0 0.0   1   0.0 0.0 122216.0, 122216.0 -0.45
BXD12/TyJ m 140932.0 0.0   1   0.0 0.0 140932.0, 140932.0 -0.21
BXD13/TyJ m 120066.0 0.0   1   0.0 0.0 120066.0, 120066.0 -0.48
BXD14/TyJ m 134378.0 0.0   1   0.0 0.0 134378.0, 134378.0 -0.3
BXD15/TyJ m 156414.0 0.0   1   0.0 0.0 156414.0, 156414.0 -0.01
BXD18/TyJ m 104176.0 0.0   1   0.0 0.0 104176.0, 104176.0 -0.68
BXD19/TyJ m 145917.0 25570.0   2   18081.0 0.175 127836.0, 163998.0 -0.15
BXD1/TyJ m 154044.0 0.0   1   0.0 0.0 154044.0, 154044.0 -0.04
BXD20/TyJ m 125037.0 0.0   1   0.0 0.0 125037.0, 125037.0 -0.42
BXD21/TyJ m 101484.0 0.0   1   0.0 0.0 101484.0, 101484.0 -0.72
BXD22/TyJ m 159760.0 0.0   1   0.0 0.0 159760.0, 159760.0 0.03
BXD24/TyJ m 125432.0 0.0   1   0.0 0.0 125432.0, 125432.0 -0.41
BXD24/TyJ-Cep290rd16/J m 107158.0 0.0   1   0.0 0.0 107158.0, 107158.0 -0.64
BXD28/TyJ m 192283.0 18870.0   2   13343.0 0.0981 178940.0, 205626.0 0.45
BXD29-Tlr4lps-2J/J m 224686.0 0.0   1   0.0 0.0 224686.0, 224686.0 0.86
BXD2/TyJ m 136237.0 0.0   1   0.0 0.0 136237.0, 136237.0 -0.27
BXD32/TyJ m 172156.0 0.0   1   0.0 0.0 172156.0, 172156.0 0.19
BXD33/TyJ m 83838.0 0.0   1   0.0 0.0 83838.0, 83838.0 -0.94
BXD34/TyJ m 167118.0 0.0   1   0.0 0.0 167118.0, 167118.0 0.12
BXD36/TyJ m 82579.0 0.0   1   0.0 0.0 82579.0, 82579.0 -0.96
BXD38/TyJ m 86847.0 0.0   1   0.0 0.0 86847.0, 86847.0 -0.9
BXD39/TyJ m 119623.0 0.0   1   0.0 0.0 119623.0, 119623.0 -0.49
BXD40/TyJ m 167213.0 0.0   1   0.0 0.0 167213.0, 167213.0 0.12
BXD42/TyJ m 88924.0 0.0   1   0.0 0.0 88924.0, 88924.0 -0.88
BXD5/TyJ m 235578.0 0.0   1   0.0 0.0 235578.0, 235578.0 1.0
BXD6/TyJ m 81564.0 0.0   1   0.0 0.0 81564.0, 81564.0 -0.97
BXD8/TyJ m 128298.0 0.0   1   0.0 0.0 128298.0, 128298.0 -0.37
BXD9/TyJ m 134975.0 0.0   1   0.0 0.0 134975.0, 134975.0 -0.29
BXH10/TyJ m 165534.0 0.0   1   0.0 0.0 165534.0, 165534.0 0.1
BXH19/TyJ m 92408.0 0.0   1   0.0 0.0 92408.0, 92408.0 -0.83
BXH20/KccJ m 111093.0 0.0   1   0.0 0.0 111093.0, 111093.0 -0.59
BXH22/KccJ m 201205.0 0.0   1   0.0 0.0 201205.0, 201205.0 0.56
BXH2/TyJ m 271104.0 0.0   1   0.0 0.0 271104.0, 271104.0 1.45
BXH4/TyJ m 126104.0 12096.0   2   8553.0 0.0959 117550.0, 134657.0 -0.4
BXH6/TyJ m 119219.0 0.0   1   0.0 0.0 119219.0, 119219.0 -0.49
BXH7/TyJ m 111298.0 0.0   1   0.0 0.0 111298.0, 111298.0 -0.59
BXH8/TyJ m 185940.0 0.0   1   0.0 0.0 185940.0, 185940.0 0.36
BXH9/TyJ m 158832.0 0.0   1   0.0 0.0 158832.0, 158832.0 0.02
C3H/HeJ m 188457.0 157272.0   2   111208.0 0.835 77250.0, 299665.0 0.4
C57BL/6J m 207820.0 93969.0   5 42024.0 0.452 52584.0, 302679.0 0.64
C57L/J m 132056.0 0.0   1   0.0 0.0 132056.0, 132056.0 -0.33
C58/J m 82111.0 0.0   1   0.0 0.0 82111.0, 82111.0 -0.97
CAST/EiJ m 82284.0 0.0   1   0.0 0.0 82284.0, 82284.0 -0.96
CBA/J m 139355.0 0.0   1   0.0 0.0 139355.0, 139355.0 -0.23
CE/J m 130751.0 0.0   1   0.0 0.0 130751.0, 130751.0 -0.34
CXB11/HiAJ m 169473.0 61856.0   2   43739.0 0.365 125734.0, 213212.0 0.15
CXB12/HiAJ m 248002.0 25700.0   2   18172.0 0.104 229830.0, 266175.0 1.16
CXB13/HiAJ m 203669.0 87900.0   3 50749.0 0.432 144910.0, 304721.0 0.59
CXB1/ByJ m 175917.0 44375.0   3 25620.0 0.252 148238.0, 227100.0 0.24
CXB2/ByJ m 150997.0 26336.0   3 15205.0 0.174 135151.0, 181399.0 -0.08
CXB3/ByJ m 170878.0 13081.0   2   9249.0 0.0765 161629.0, 180128.0 0.17
CXB4/ByJ m 259696.0 63875.0   2   45167.0 0.246 214529.0, 304862.0 1.31
CXB6/ByJ m 104962.0 67822.0   3 39157.0 0.646 54280.0, 182008.0 -0.67
CXB7/ByJ m 144288.0 31626.0   2   22363.0 0.219 121926.0, 166651.0 -0.17
CXB8/HiAJ m 368204.0 275365.0   3 158982.0 0.748 204858.0, 686128.0 2.7
CXB9/HiAJ m 250000.0 51953.0   3 29995.0 0.208 193794.0, 296262.0 1.18
DBA/2J m 123109.0 23070.0   4 11535.0 0.187 89584.0, 138441.0 -0.44
FVB/NJ m 52424.0 0.0   1   0.0 0.0 52424.0, 52424.0 -1.35
I/LnJ m 81940.0 0.0   1   0.0 0.0 81940.0, 81940.0 -0.97
KK/HlJ m 222787.0 0.0   1   0.0 0.0 222787.0, 222787.0 0.84
LG/J m 96852.0 0.0   1   0.0 0.0 96852.0, 96852.0 -0.78
LP/J m 56114.0 0.0   1   0.0 0.0 56114.0, 56114.0 -1.3
MA/MyJ m 124939.0 0.0   1   0.0 0.0 124939.0, 124939.0 -0.42
NOD/ShiLtJ m 305441.0 0.0   1   0.0 0.0 305441.0, 305441.0 1.89
NON/ShiLtJ m 91127.0 0.0   1   0.0 0.0 91127.0, 91127.0 -0.85
NZW/LacJ m 178850.0 0.0   1   0.0 0.0 178850.0, 178850.0 0.27
PL/J m 154323.0 0.0   1   0.0 0.0 154323.0, 154323.0 -0.04
RIIIS/J m 120225.0 0.0   1   0.0 0.0 120225.0, 120225.0 -0.48
SEA/GnJ m 116078.0 0.0   1   0.0 0.0 116078.0, 116078.0 -0.53
SJL/J m 65732.0 0.0   1   0.0 0.0 65732.0, 65732.0 -1.18
SM/J m 141251.0 0.0   1   0.0 0.0 141251.0, 141251.0 -0.21
SWR/J m 161678.0 0.0   1   0.0 0.0 161678.0, 161678.0 0.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 89373.8 63291.6364 217997.8806 0.0
AXB19b/PgnJ m 102234.0 63291.6364 230858.0806 0.0
AXB24/PgnJ m 196816.65 63291.6364 325440.7306 68192.5694
BALB/cJ m 176879.9667 51677.4047 281901.0887 71858.8446
BXA16/PgnJ m 118915.15 63291.6364 247539.2306 0.0
BXD19/TyJ m 145916.65 63291.6364 274540.7306 17292.5694
BXD28/TyJ m 192283.25 63291.6364 320907.3306 63659.1694
BXH4/TyJ m 126103.95 63291.6364 254728.0306 0.0
C3H/HeJ m 188457.35 63291.6364 317081.4306 59833.2694
C57BL/6J m 207820.02 40029.1456 289169.0313 126471.0087
CXB11/HiAJ m 169473.4 63291.6364 298097.4806 40849.3194
CXB12/HiAJ m 248002.2 63291.6364 376626.2806 119378.1194
CXB13/HiAJ m 203668.5667 51677.4047 308689.6887 98647.4446
CXB1/ByJ m 175916.6333 51677.4047 280937.7554 70895.5113
CXB2/ByJ m 150997.4333 51677.4047 256018.5554 45976.3113
CXB3/ByJ m 170878.25 63291.6364 299502.3306 42254.1694
CXB4/ByJ m 259695.5 63291.6364 388319.5806 131071.4194
CXB6/ByJ m 104962.4 51677.4047 209983.522 0.0
CXB7/ByJ m 144288.4 63291.6364 272912.4806 15664.3194
CXB8/HiAJ m 368204.0667 51677.4047 473225.1887 263182.9446
CXB9/HiAJ m 250000.0667 51677.4047 355021.1887 144978.9446
DBA/2J m 123109.45 44753.9453 214060.4096 32158.4904




  GWAS USING LINEAR MIXED MODELS