Project measure / variable:   HMDPpheno9   AGPA

ID, description, units MPD:50422   AGPA   liver 2-arachidonoylglycerophosphoethanolamine (16h fast), relative abundance    
Data set, strains HMDPpheno9   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno9 - liver 2-arachidonoylglycerophosphoethanolamine (16h fast), relative abundance

BXA26/PgnJCXB8/HiAJBXH2/TyJBXA1/PgnJBXA24/PgnJCXB4/ByJAXB6/PgnJBXD5/TyJBXA13/PgnJAXB8/PgnJAXB19/PgnJBXH8/TyJAXB23/PgnJBXH22/KccJCXB1/ByJC3H/HeJBXD15/TyJBXD9/TyJBXD22/TyJAXB10/PgnJAXB19b/PgnJBXH9/TyJNOD/ShiLtJSWR/JBXD40/TyJBUB/BnJBXA14/PgnJCXB13/HiAJBXA8/PgnJBALB/cJBXA11/PgnJBXD32/TyJBXD28/TyJCXB12/HiAJNZW/LacJBXD29-Tlr4<lps-2J>/JBXH10/TyJBXA2/PgnJAXB19a/PgnJAXB12/PgnJBXH20/KccJBXH4/TyJSM/JBXD33/TyJBXH7/TyJPL/JAXB4/PgnJBXD14/TyJI/LnJNON/ShiLtJCBA/JBXD2/TyJBXD1/TyJBXD19/TyJSEA/GnJCXB3/ByJCXB7/ByJBXD42/TyJKK/HlJBXD39/TyJBXD24/TyJAXB5/PgnJC57BL/6JCAST/EiJLG/JBXA7/PgnJBXD12/TyJCXB9/HiAJAXB15/PgnJBXD34/TyJBXA16/PgnJAKR/JBXH19/TyJAXB24/PgnJ129X1/SvJSJL/JBXD13/TyJLP/JC58/JCE/JBXH6/TyJBXD38/TyJBXD6/TyJMA/MyJCXB11/HiAJBXD20/TyJC57L/JBXA25/PgnJDBA/2JRIIIS/JA/JBXD8/TyJBXD21/TyJBXD24/TyJ-Cep290<rd16>/JAXB2/PgnJBXD36/TyJCXB2/ByJBXD18/TyJAXB1/PgnJBXD11/TyJAXB13/PgnJBTBR T<+> Itpr3<tf>/JCXB6/ByJFVB/NJBXA12/PgnJBXA4/PgnJ (no units) 050,000100,000150,000200,000250,000300,000350,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means146814   None
Median of the strain means139848   None
SD of the strain means± 49784
Coefficient of variation (CV)0.339
Min–max range of strain means58130   –   326508   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 138432302392.22 6592014399.6295 2.2095 0.0192
Residuals 34 101438684648.597 2983490724.9587


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 118955.0 0.0   1   0.0 0.0 118955.0, 118955.0 -0.56
A/J m 100069.0 89760.0   2   63470.0 0.897 36599.0, 163539.0 -0.94
AKR/J m 121634.0 0.0   1   0.0 0.0 121634.0, 121634.0 -0.51
AXB10/PgnJ m 181544.0 0.0   1   0.0 0.0 181544.0, 181544.0 0.7
AXB12/PgnJ m 153746.0 0.0   1   0.0 0.0 153746.0, 153746.0 0.14
AXB13/PgnJ m 71176.0 0.0   1   0.0 0.0 71176.0, 71176.0 -1.52
AXB15/PgnJ m 125393.0 0.0   1   0.0 0.0 125393.0, 125393.0 -0.43
AXB19a/PgnJ m 153771.0 0.0   1   0.0 0.0 153771.0, 153771.0 0.14
AXB19b/PgnJ m 180063.0 29296.0   2   20716.0 0.163 159348.0, 200779.0 0.67
AXB19/PgnJ m 222994.0 0.0   1   0.0 0.0 222994.0, 222994.0 1.53
AXB1/PgnJ m 73685.0 0.0   1   0.0 0.0 73685.0, 73685.0 -1.47
AXB23/PgnJ m 209992.0 0.0   1   0.0 0.0 209992.0, 209992.0 1.27
AXB24/PgnJ m 120295.0 15125.0   2   10695.0 0.126 109600.0, 130990.0 -0.53
AXB2/PgnJ m 94865.0 0.0   1   0.0 0.0 94865.0, 94865.0 -1.04
AXB4/PgnJ m 144646.0 0.0   1   0.0 0.0 144646.0, 144646.0 -0.04
AXB5/PgnJ m 132877.0 0.0   1   0.0 0.0 132877.0, 132877.0 -0.28
AXB6/PgnJ m 237363.0 0.0   1   0.0 0.0 237363.0, 237363.0 1.82
AXB8/PgnJ m 224903.0 0.0   1   0.0 0.0 224903.0, 224903.0 1.57
BALB/cJ m 171379.0 54746.0   3 31608.0 0.319 125928.0, 232155.0 0.49
BTBR T+ Itpr3tf/J m 70451.0 0.0   1   0.0 0.0 70451.0, 70451.0 -1.53
BUB/BnJ m 173987.0 0.0   1   0.0 0.0 173987.0, 173987.0 0.55
BXA11/PgnJ m 167530.0 0.0   1   0.0 0.0 167530.0, 167530.0 0.42
BXA12/PgnJ m 61743.0 0.0   1   0.0 0.0 61743.0, 61743.0 -1.71
BXA13/PgnJ m 228103.0 0.0   1   0.0 0.0 228103.0, 228103.0 1.63
BXA14/PgnJ m 173538.0 0.0   1   0.0 0.0 173538.0, 173538.0 0.54
BXA16/PgnJ m 123930.0 34930.0   2   24700.0 0.282 99230.0, 148629.0 -0.46
BXA1/PgnJ m 240198.0 0.0   1   0.0 0.0 240198.0, 240198.0 1.88
BXA24/PgnJ m 240196.0 0.0   1   0.0 0.0 240196.0, 240196.0 1.88
BXA25/PgnJ m 103769.0 0.0   1   0.0 0.0 103769.0, 103769.0 -0.86
BXA26/PgnJ m 326508.0 0.0   1   0.0 0.0 326508.0, 326508.0 3.61
BXA2/PgnJ m 154892.0 0.0   1   0.0 0.0 154892.0, 154892.0 0.16
BXA4/PgnJ m 58130.0 0.0   1   0.0 0.0 58130.0, 58130.0 -1.78
BXA7/PgnJ m 128098.0 0.0   1   0.0 0.0 128098.0, 128098.0 -0.38
BXA8/PgnJ m 171481.0 0.0   1   0.0 0.0 171481.0, 171481.0 0.5
BXD11/TyJ m 72097.0 0.0   1   0.0 0.0 72097.0, 72097.0 -1.5
BXD12/TyJ m 126819.0 0.0   1   0.0 0.0 126819.0, 126819.0 -0.4
BXD13/TyJ m 117731.0 0.0   1   0.0 0.0 117731.0, 117731.0 -0.58
BXD14/TyJ m 144314.0 0.0   1   0.0 0.0 144314.0, 144314.0 -0.05
BXD15/TyJ m 189557.0 0.0   1   0.0 0.0 189557.0, 189557.0 0.86
BXD18/TyJ m 90281.0 0.0   1   0.0 0.0 90281.0, 90281.0 -1.14
BXD19/TyJ m 139662.0 6330.0   2   4476.0 0.0453 135186.0, 144138.0 -0.14
BXD1/TyJ m 140033.0 0.0   1   0.0 0.0 140033.0, 140033.0 -0.14
BXD20/TyJ m 105921.0 0.0   1   0.0 0.0 105921.0, 105921.0 -0.82
BXD21/TyJ m 99010.0 0.0   1   0.0 0.0 99010.0, 99010.0 -0.96
BXD22/TyJ m 187509.0 0.0   1   0.0 0.0 187509.0, 187509.0 0.82
BXD24/TyJ m 133818.0 0.0   1   0.0 0.0 133818.0, 133818.0 -0.26
BXD24/TyJ-Cep290rd16/J m 97206.0 0.0   1   0.0 0.0 97206.0, 97206.0 -1.0
BXD28/TyJ m 164643.0 24934.0   2   17631.0 0.151 147012.0, 182274.0 0.36
BXD29-Tlr4lps-2J/J m 156782.0 0.0   1   0.0 0.0 156782.0, 156782.0 0.2
BXD2/TyJ m 140209.0 0.0   1   0.0 0.0 140209.0, 140209.0 -0.13
BXD32/TyJ m 164920.0 0.0   1   0.0 0.0 164920.0, 164920.0 0.36
BXD33/TyJ m 147689.0 0.0   1   0.0 0.0 147689.0, 147689.0 0.02
BXD34/TyJ m 124934.0 0.0   1   0.0 0.0 124934.0, 124934.0 -0.44
BXD36/TyJ m 92714.0 0.0   1   0.0 0.0 92714.0, 92714.0 -1.09
BXD38/TyJ m 111833.0 0.0   1   0.0 0.0 111833.0, 111833.0 -0.7
BXD39/TyJ m 137631.0 0.0   1   0.0 0.0 137631.0, 137631.0 -0.18
BXD40/TyJ m 175525.0 0.0   1   0.0 0.0 175525.0, 175525.0 0.58
BXD42/TyJ m 138252.0 0.0   1   0.0 0.0 138252.0, 138252.0 -0.17
BXD5/TyJ m 234433.0 0.0   1   0.0 0.0 234433.0, 234433.0 1.76
BXD6/TyJ m 110985.0 0.0   1   0.0 0.0 110985.0, 110985.0 -0.72
BXD8/TyJ m 99578.0 0.0   1   0.0 0.0 99578.0, 99578.0 -0.95
BXD9/TyJ m 188593.0 0.0   1   0.0 0.0 188593.0, 188593.0 0.84
BXH10/TyJ m 155283.0 0.0   1   0.0 0.0 155283.0, 155283.0 0.17
BXH19/TyJ m 121151.0 0.0   1   0.0 0.0 121151.0, 121151.0 -0.52
BXH20/KccJ m 153536.0 0.0   1   0.0 0.0 153536.0, 153536.0 0.14
BXH22/KccJ m 202028.0 0.0   1   0.0 0.0 202028.0, 202028.0 1.11
BXH2/TyJ m 276972.0 0.0   1   0.0 0.0 276972.0, 276972.0 2.61
BXH4/TyJ m 148250.0 35134.0   2   24843.0 0.237 123407.0, 173093.0 0.03
BXH6/TyJ m 112924.0 0.0   1   0.0 0.0 112924.0, 112924.0 -0.68
BXH7/TyJ m 147344.0 0.0   1   0.0 0.0 147344.0, 147344.0 0.01
BXH8/TyJ m 217555.0 0.0   1   0.0 0.0 217555.0, 217555.0 1.42
BXH9/TyJ m 179957.0 0.0   1   0.0 0.0 179957.0, 179957.0 0.67
C3H/HeJ m 195295.0 78934.0   2   55814.0 0.404 139481.0, 251110.0 0.97
C57BL/6J m 131777.0 70382.0   5 31476.0 0.534 19264.0, 210389.0 -0.3
C57L/J m 105805.0 0.0   1   0.0 0.0 105805.0, 105805.0 -0.82
C58/J m 114448.0 0.0   1   0.0 0.0 114448.0, 114448.0 -0.65
CAST/EiJ m 130712.0 0.0   1   0.0 0.0 130712.0, 130712.0 -0.32
CBA/J m 140374.0 0.0   1   0.0 0.0 140374.0, 140374.0 -0.13
CE/J m 113646.0 0.0   1   0.0 0.0 113646.0, 113646.0 -0.67
CXB11/HiAJ m 106169.0 32740.0   2   23151.0 0.308 83019.0, 129320.0 -0.82
CXB12/HiAJ m 159318.0 96296.0   2   68092.0 0.604 91226.0, 227409.0 0.25
CXB13/HiAJ m 171843.0 18385.0   3 10615.0 0.107 160990.0, 193070.0 0.5
CXB1/ByJ m 200063.0 43168.0   3 24923.0 0.216 151883.0, 235220.0 1.07
CXB2/ByJ m 92280.0 56858.0   3 32827.0 0.616 36489.0, 150148.0 -1.1
CXB3/ByJ m 138630.0 5879.0   2   4157.0 0.0424 134473.0, 142787.0 -0.16
CXB4/ByJ m 237564.0 59263.0   2   41905.0 0.249 195658.0, 279469.0 1.82
CXB6/ByJ m 66067.0 65210.0   3 37649.0 0.987 9635.0, 137456.0 -1.62
CXB7/ByJ m 138571.0 11094.0   2   7844.0 0.0801 130726.0, 146415.0 -0.17
CXB8/HiAJ m 279669.0 93227.0   3 53825.0 0.333 187555.0, 373971.0 2.67
CXB9/HiAJ m 126689.0 51080.0   3 29491.0 0.403 69690.0, 168321.0 -0.4
DBA/2J m 102858.0 19582.0   4 9791.0 0.19 86363.0, 129602.0 -0.88
FVB/NJ m 65396.0 0.0   1   0.0 0.0 65396.0, 65396.0 -1.64
I/LnJ m 143973.0 0.0   1   0.0 0.0 143973.0, 143973.0 -0.06
KK/HlJ m 137633.0 0.0   1   0.0 0.0 137633.0, 137633.0 -0.18
LG/J m 129226.0 0.0   1   0.0 0.0 129226.0, 129226.0 -0.35
LP/J m 114813.0 0.0   1   0.0 0.0 114813.0, 114813.0 -0.64
MA/MyJ m 107737.0 0.0   1   0.0 0.0 107737.0, 107737.0 -0.78
NOD/ShiLtJ m 176633.0 0.0   1   0.0 0.0 176633.0, 176633.0 0.6
NON/ShiLtJ m 142290.0 0.0   1   0.0 0.0 142290.0, 142290.0 -0.09
NZW/LacJ m 156912.0 0.0   1   0.0 0.0 156912.0, 156912.0 0.2
PL/J m 145485.0 0.0   1   0.0 0.0 145485.0, 145485.0 -0.03
RIIIS/J m 100695.0 0.0   1   0.0 0.0 100695.0, 100695.0 -0.93
SEA/GnJ m 138862.0 0.0   1   0.0 0.0 138862.0, 138862.0 -0.16
SJL/J m 117753.0 0.0   1   0.0 0.0 117753.0, 117753.0 -0.58
SM/J m 147740.0 0.0   1   0.0 0.0 147740.0, 147740.0 0.02
SWR/J m 175746.0 0.0   1   0.0 0.0 175746.0, 175746.0 0.58


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 100069.0 38623.1195 178560.6226 21577.3774
AXB19b/PgnJ m 180063.15 38623.1195 258554.7726 101571.5274
AXB24/PgnJ m 120294.95 38623.1195 198786.5726 41803.3274
BALB/cJ m 171379.3 31535.645 235467.4415 107291.1585
BXA16/PgnJ m 123929.75 38623.1195 202421.3726 45438.1274
BXD19/TyJ m 139662.4 38623.1195 218154.0226 61170.7774
BXD28/TyJ m 164643.2 38623.1195 243134.8226 86151.5774
BXH4/TyJ m 148250.05 38623.1195 226741.6726 69758.4274
C3H/HeJ m 195295.05 38623.1195 273786.6726 116803.4274
C57BL/6J m 131777.2 24427.4056 181419.6609 82134.7391
CXB11/HiAJ m 106169.45 38623.1195 184661.0726 27677.8274
CXB12/HiAJ m 159317.8 38623.1195 237809.4226 80826.1774
CXB13/HiAJ m 171842.8 31535.645 235930.9415 107754.6585
CXB1/ByJ m 200063.2667 31535.645 264151.4082 135975.1252
CXB2/ByJ m 92279.9 31535.645 156368.0415 28191.7585
CXB3/ByJ m 138629.7 38623.1195 217121.3226 60138.0774
CXB4/ByJ m 237563.8 38623.1195 316055.4226 159072.1774
CXB6/ByJ m 66066.8 31535.645 130154.9415 1978.6585
CXB7/ByJ m 138570.7 38623.1195 217062.3226 60079.0774
CXB8/HiAJ m 279669.3333 31535.645 343757.4748 215581.1918
CXB9/HiAJ m 126689.2333 31535.645 190777.3748 62601.0918
DBA/2J m 102857.525 27310.6697 158359.4836 47355.5664




  GWAS USING LINEAR MIXED MODELS

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