Project measure / variable:   HMDPpheno9   OGPC_1

ID, description, units MPD:50413   OGPC_1   liver 1-oleoylglycerophosphocholine (16h fast), relative abundance    
Data set, strains HMDPpheno9   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

HMDPpheno9 - liver 1-oleoylglycerophosphocholine (16h fast), relative abundance

BXH19/TyJNON/ShiLtJAXB1/PgnJ129X1/SvJBXA26/PgnJBXA14/PgnJAXB19b/PgnJBXH7/TyJBXD12/TyJCXB1/ByJSJL/JC58/JBXD14/TyJBUB/BnJLG/JBXD15/TyJAXB19/PgnJBXH20/KccJBTBR T<+> Itpr3<tf>/JAXB23/PgnJBXA7/PgnJBXA13/PgnJCXB8/HiAJBXH6/TyJCAST/EiJBXD33/TyJBXD6/TyJBXH2/TyJKK/HlJAXB19a/PgnJBXD5/TyJBXA24/PgnJBXA4/PgnJAXB4/PgnJDBA/2JBXH8/TyJI/LnJBXD39/TyJAXB2/PgnJBXH4/TyJCXB3/ByJC3H/HeJBXH22/KccJBXD20/TyJPL/JAXB24/PgnJNOD/ShiLtJBXD9/TyJBXD1/TyJBXD22/TyJCE/JFVB/NJBXD42/TyJBXD2/TyJLP/JBXA8/PgnJSM/JBXH10/TyJAXB10/PgnJBXA1/PgnJCXB13/HiAJSWR/JBXA2/PgnJBXH9/TyJBXD19/TyJSEA/GnJCBA/JBXD40/TyJBXD24/TyJCXB7/ByJBXA16/PgnJBALB/cJCXB2/ByJBXD29-Tlr4<lps-2J>/JCXB4/ByJBXD24/TyJ-Cep290<rd16>/JAKR/JBXD11/TyJMA/MyJBXA25/PgnJBXD38/TyJAXB6/PgnJNZW/LacJBXD8/TyJA/JBXA11/PgnJCXB6/ByJC57BL/6JAXB12/PgnJBXD32/TyJAXB5/PgnJBXD28/TyJBXD18/TyJCXB12/HiAJCXB11/HiAJAXB8/PgnJBXA12/PgnJBXD21/TyJBXD13/TyJBXD36/TyJBXD34/TyJAXB15/PgnJAXB13/PgnJRIIIS/JCXB9/HiAJC57L/J (no units) 02,000,0004,000,0006,000,0008,000,00010,000,00012,000,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means1747525   None
Median of the strain means1511241   None
SD of the strain means± 1493122
Coefficient of variation (CV)0.854
Min–max range of strain means511024   –   13255455   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 25247333303295.9 1202253966823.62 1.7014 0.0854
Residuals 32 22611516693458.3 706609896670.573


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 4768342.0 0.0   1   0.0 0.0 4768342.0, 4768342.0 2.02
A/J m 908283.0 914595.0   2   646716.0 1.01 261567.0, 1555000.0 -0.56
AKR/J m 1057388.0 0.0   1   0.0 0.0 1057388.0, 1057388.0 -0.46
AXB10/PgnJ m 1361154.0 0.0   1   0.0 0.0 1361154.0, 1361154.0 -0.26
AXB12/PgnJ m 872568.0 0.0   1   0.0 0.0 872568.0, 872568.0 -0.59
AXB13/PgnJ m 536975.0 0.0   1   0.0 0.0 536975.0, 536975.0 -0.81
AXB15/PgnJ m 555405.0 0.0   1   0.0 0.0 555405.0, 555405.0 -0.8
AXB19a/PgnJ m 1874032.0 0.0   1   0.0 0.0 1874032.0, 1874032.0 0.08
AXB19b/PgnJ m 3359539.0 1359981.0   2   961652.0 0.405 2397888.0, 4321191.0 1.08
AXB19/PgnJ m 2323376.0 0.0   1   0.0 0.0 2323376.0, 2323376.0 0.39
AXB1/PgnJ m 5676882.0 0.0   1   0.0 0.0 5676882.0, 5676882.0 2.63
AXB23/PgnJ m 2180796.0 0.0   1   0.0 0.0 2180796.0, 2180796.0 0.29
AXB24/PgnJ m 1586054.0 1548631.0   2   1095047.0 0.976 491007.0, 2681102.0 -0.11
AXB2/PgnJ m 1733347.0 0.0   1   0.0 0.0 1733347.0, 1733347.0 -0.01
AXB4/PgnJ m 1792852.0 0.0   1   0.0 0.0 1792852.0, 1792852.0 0.03
AXB5/PgnJ m 847725.0 0.0   1   0.0 0.0 847725.0, 847725.0 -0.6
AXB6/PgnJ m 947367.0 0.0   1   0.0 0.0 947367.0, 947367.0 -0.54
AXB8/PgnJ m 763996.0 0.0   1   0.0 0.0 763996.0, 763996.0 -0.66
BALB/cJ m 1114908.0 480240.0   3 277267.0 0.431 560694.0, 1408317.0 -0.42
BTBR T+ Itpr3tf/J m 2198526.0 0.0   1   0.0 0.0 2198526.0, 2198526.0 0.3
BUB/BnJ m 2360565.0 0.0   1   0.0 0.0 2360565.0, 2360565.0 0.41
BXA11/PgnJ m 903006.0 0.0   1   0.0 0.0 903006.0, 903006.0 -0.57
BXA12/PgnJ m 718529.0 0.0   1   0.0 0.0 718529.0, 718529.0 -0.69
BXA13/PgnJ m 2067686.0 0.0   1   0.0 0.0 2067686.0, 2067686.0 0.21
BXA14/PgnJ m 3601678.0 0.0   1   0.0 0.0 3601678.0, 3601678.0 1.24
BXA16/PgnJ m 1142124.0 26313.0   2   18606.0 0.023 1123518.0, 1160730.0 -0.41
BXA1/PgnJ m 1354079.0 0.0   1   0.0 0.0 1354079.0, 1354079.0 -0.26
BXA24/PgnJ m 1833028.0 0.0   1   0.0 0.0 1833028.0, 1833028.0 0.06
BXA25/PgnJ m 967822.0 0.0   1   0.0 0.0 967822.0, 967822.0 -0.52
BXA26/PgnJ m 4008988.0 0.0   1   0.0 0.0 4008988.0, 4008988.0 1.51
BXA2/PgnJ m 1285596.0 0.0   1   0.0 0.0 1285596.0, 1285596.0 -0.31
BXA4/PgnJ m 1826306.0 0.0   1   0.0 0.0 1826306.0, 1826306.0 0.05
BXA7/PgnJ m 2106412.0 0.0   1   0.0 0.0 2106412.0, 2106412.0 0.24
BXA8/PgnJ m 1496237.0 0.0   1   0.0 0.0 1496237.0, 1496237.0 -0.17
BXD11/TyJ m 1044596.0 0.0   1   0.0 0.0 1044596.0, 1044596.0 -0.47
BXD12/TyJ m 3071359.0 0.0   1   0.0 0.0 3071359.0, 3071359.0 0.89
BXD13/TyJ m 657387.0 0.0   1   0.0 0.0 657387.0, 657387.0 -0.73
BXD14/TyJ m 2439688.0 0.0   1   0.0 0.0 2439688.0, 2439688.0 0.46
BXD15/TyJ m 2337428.0 0.0   1   0.0 0.0 2337428.0, 2337428.0 0.4
BXD18/TyJ m 789177.0 0.0   1   0.0 0.0 789177.0, 789177.0 -0.64
BXD19/TyJ m 1274347.0 239923.0   2   169651.0 0.188 1104696.0, 1443998.0 -0.32
BXD1/TyJ m 1581299.0 0.0   1   0.0 0.0 1581299.0, 1581299.0 -0.11
BXD20/TyJ m 1619877.0 0.0   1   0.0 0.0 1619877.0, 1619877.0 -0.09
BXD21/TyJ m 668786.0 0.0   1   0.0 0.0 668786.0, 668786.0 -0.72
BXD22/TyJ m 1568451.0 0.0   1   0.0 0.0 1568451.0, 1568451.0 -0.12
BXD24/TyJ m 1159852.0 0.0   1   0.0 0.0 1159852.0, 1159852.0 -0.39
BXD24/TyJ-Cep290rd16/J m 1067880.0 0.0   1   0.0 0.0 1067880.0, 1067880.0 -0.46
BXD28/TyJ m 811281.0 311448.0   2   220227.0 0.384 591054.0, 1031509.0 -0.63
BXD29-Tlr4lps-2J/J m 1092151.0 0.0   1   0.0 0.0 1092151.0, 1092151.0 -0.44
BXD2/TyJ m 1509068.0 0.0   1   0.0 0.0 1509068.0, 1509068.0 -0.16
BXD32/TyJ m 849435.0 0.0   1   0.0 0.0 849435.0, 849435.0 -0.6
BXD33/TyJ m 1938599.0 0.0   1   0.0 0.0 1938599.0, 1938599.0 0.13
BXD34/TyJ m 567920.0 0.0   1   0.0 0.0 567920.0, 567920.0 -0.79
BXD36/TyJ m 598542.0 0.0   1   0.0 0.0 598542.0, 598542.0 -0.77
BXD38/TyJ m 967652.0 0.0   1   0.0 0.0 967652.0, 967652.0 -0.52
BXD39/TyJ m 1743312.0 0.0   1   0.0 0.0 1743312.0, 1743312.0 0.0
BXD40/TyJ m 1174832.0 0.0   1   0.0 0.0 1174832.0, 1174832.0 -0.38
BXD42/TyJ m 1513414.0 0.0   1   0.0 0.0 1513414.0, 1513414.0 -0.16
BXD5/TyJ m 1845826.0 0.0   1   0.0 0.0 1845826.0, 1845826.0 0.07
BXD6/TyJ m 1930334.0 0.0   1   0.0 0.0 1930334.0, 1930334.0 0.12
BXD8/TyJ m 913595.0 0.0   1   0.0 0.0 913595.0, 913595.0 -0.56
BXD9/TyJ m 1581299.0 0.0   1   0.0 0.0 1581299.0, 1581299.0 -0.11
BXH10/TyJ m 1415617.0 0.0   1   0.0 0.0 1415617.0, 1415617.0 -0.22
BXH19/TyJ m 13255455.0 0.0   1   0.0 0.0 13255455.0, 13255455.0 7.71
BXH20/KccJ m 2314093.0 0.0   1   0.0 0.0 2314093.0, 2314093.0 0.38
BXH22/KccJ m 1645402.0 0.0   1   0.0 0.0 1645402.0, 1645402.0 -0.07
BXH2/TyJ m 1914417.0 0.0   1   0.0 0.0 1914417.0, 1914417.0 0.11
BXH4/TyJ m 1683632.0 804236.0   2   568680.0 0.478 1114952.0, 2252312.0 -0.04
BXH6/TyJ m 1998128.0 0.0   1   0.0 0.0 1998128.0, 1998128.0 0.17
BXH7/TyJ m 3110221.0 0.0   1   0.0 0.0 3110221.0, 3110221.0 0.91
BXH8/TyJ m 1787205.0 0.0   1   0.0 0.0 1787205.0, 1787205.0 0.03
BXH9/TyJ m 1274375.0 0.0   1   0.0 0.0 1274375.0, 1274375.0 -0.32
C3H/HeJ m 1658807.0 819590.0   2   579537.0 0.494 1079269.0, 2238344.0 -0.06
C57BL/6J m 889813.0 530189.0   5 237108.0 0.596 103336.0, 1496325.0 -0.57
C57L/J m 511024.0 0.0   1   0.0 0.0 511024.0, 511024.0 -0.83
C58/J m 2670802.0 0.0   1   0.0 0.0 2670802.0, 2670802.0 0.62
CAST/EiJ m 1965972.0 0.0   1   0.0 0.0 1965972.0, 1965972.0 0.15
CBA/J m 1217233.0 0.0   1   0.0 0.0 1217233.0, 1217233.0 -0.36
CE/J m 1549707.0 0.0   1   0.0 0.0 1549707.0, 1549707.0 -0.13
CXB11/HiAJ m 766354.0 780772.0   2   552089.0 1.02 214265.0, 1318443.0 -0.66
CXB12/HiAJ m 779701.0 707881.0   2   500548.0 0.908 279153.0, 1280249.0 -0.65
CXB13/HiAJ m 1309022.0 749390.0   3 432660.0 0.572 531704.0, 2026949.0 -0.29
CXB1/ByJ m 2972604.0 1142658.0   3 659714.0 0.384 2062529.0, 4254980.0 0.82
CXB2/ByJ m 1111908.0 146125.0   2   103326.0 0.131 1008582.0, 1215234.0 -0.43
CXB3/ByJ m 1682918.0 416544.0   2   294541.0 0.248 1388376.0, 1977459.0 -0.04
CXB4/ByJ m 1071277.0 303983.0   2   214948.0 0.284 856329.0, 1286226.0 -0.45
CXB6/ByJ m 895586.0 1062331.0   2   751181.0 1.19 144404.0, 1646767.0 -0.57
CXB7/ByJ m 1152426.0 343976.0   2   243228.0 0.298 909198.0, 1395654.0 -0.4
CXB8/HiAJ m 2033847.0 1043090.0   3 602228.0 0.513 927665.0, 2999622.0 0.19
CXB9/HiAJ m 522678.0 646030.0   3 372986.0 1.24 40206.0, 1256632.0 -0.82
DBA/2J m 1792021.0 1300982.0   4 650491.0 0.726 879287.0, 3721189.0 0.03
FVB/NJ m 1549382.0 0.0   1   0.0 0.0 1549382.0, 1549382.0 -0.13
I/LnJ m 1752755.0 0.0   1   0.0 0.0 1752755.0, 1752755.0 0.0
KK/HlJ m 1879247.0 0.0   1   0.0 0.0 1879247.0, 1879247.0 0.09
LG/J m 2360257.0 0.0   1   0.0 0.0 2360257.0, 2360257.0 0.41
LP/J m 1507900.0 0.0   1   0.0 0.0 1507900.0, 1507900.0 -0.16
MA/MyJ m 1013407.0 0.0   1   0.0 0.0 1013407.0, 1013407.0 -0.49
NOD/ShiLtJ m 1583006.0 0.0   1   0.0 0.0 1583006.0, 1583006.0 -0.11
NON/ShiLtJ m 6384994.0 0.0   1   0.0 0.0 6384994.0, 6384994.0 3.11
NZW/LacJ m 919872.0 0.0   1   0.0 0.0 919872.0, 919872.0 -0.55
PL/J m 1594906.0 0.0   1   0.0 0.0 1594906.0, 1594906.0 -0.1
RIIIS/J m 526049.0 0.0   1   0.0 0.0 526049.0, 526049.0 -0.82
SEA/GnJ m 1262060.0 0.0   1   0.0 0.0 1262060.0, 1262060.0 -0.33
SJL/J m 2718621.0 0.0   1   0.0 0.0 2718621.0, 2718621.0 0.65
SM/J m 1495918.0 0.0   1   0.0 0.0 1495918.0, 1495918.0 -0.17
SWR/J m 1288113.0 0.0   1   0.0 0.0 1288113.0, 1288113.0 -0.31


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 908283.4 594394.6066 2119025.5933 0.0
AXB19b/PgnJ m 3359539.4 594394.6066 4570281.5933 2148797.2067
AXB24/PgnJ m 1586054.05 594394.6066 2796796.2433 375311.8567
BALB/cJ m 1114908.2667 485321.164 2103475.1279 126341.4054
BXA16/PgnJ m 1142123.95 594394.6066 2352866.1433 0.0
BXD19/TyJ m 1274347.2 594394.6066 2485089.3933 63605.0067
BXD28/TyJ m 811281.35 594394.6066 2022023.5433 0.0
BXH4/TyJ m 1683631.9 594394.6066 2894374.0933 472889.7067
C3H/HeJ m 1658806.55 594394.6066 2869548.7433 448064.3567
C57BL/6J m 889812.66 375928.1571 1655553.258 124072.062
CXB11/HiAJ m 766353.95 594394.6066 1977096.1433 0.0
CXB12/HiAJ m 779701.0 594394.6066 1990443.1933 0.0
CXB13/HiAJ m 1309022.3 485321.164 2297589.1612 320455.4388
CXB1/ByJ m 2972604.4667 485321.164 3961171.3279 1984037.6054
CXB2/ByJ m 1111907.75 594394.6066 2322649.9433 0.0
CXB3/ByJ m 1682917.75 594394.6066 2893659.9433 472175.5567
CXB4/ByJ m 1071277.35 594394.6066 2282019.5433 0.0
CXB6/ByJ m 895585.85 594394.6066 2106328.0433 0.0
CXB7/ByJ m 1152426.1 594394.6066 2363168.2933 0.0
CXB8/HiAJ m 2033846.9 485321.164 3022413.7612 1045280.0388
CXB9/HiAJ m 522678.5 485321.164 1511245.3612 0.0
DBA/2J m 1792021.1 420300.457 2648145.1152 935897.0848




  GWAS USING LINEAR MIXED MODELS

Loading data... this may take some time.