Phenotype measure:   HMDPpheno9   LGPEA_2

ID, description, units MPD:50411   LGPEA_2   liver 2-linoleoylglycerophosphoethanolamine (16h fast), relative abundance  
Data set, strains HMDPpheno9   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno9 - liver 2-linoleoylglycerophosphoethanolamine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means293506   None
Median of the strain means237502   None
SD of the strain means± 193079
Coefficient of variation (CV)0.658
Min–max range of strain means32994   –   991576   None
Mean sample size per strain1.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 16 657530639377.087 41095664961.0679 3.7651 0.0015
Residuals 25 272874913098.293 10914996523.9317


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 391214.0 0.0   1   0.0 0.0 391214.0, 391214.0 0.51
A/J m 157180.0 0.0   1   0.0 0.0 157180.0, 157180.0 -0.71
AKR/J m 141889.0 0.0   1   0.0 0.0 141889.0, 141889.0 -0.79
AXB10/PgnJ m 280989.0 0.0   1   0.0 0.0 280989.0, 280989.0 -0.06
AXB12/PgnJ m 87474.0 0.0   1   0.0 0.0 87474.0, 87474.0 -1.07
AXB13/PgnJ m 94362.0 0.0   1   0.0 0.0 94362.0, 94362.0 -1.03
AXB15/PgnJ m 102093.0 0.0   1   0.0 0.0 102093.0, 102093.0 -0.99
AXB19a/PgnJ m 272463.0 0.0   1   0.0 0.0 272463.0, 272463.0 -0.11
AXB19b/PgnJ m 710242.0 232259.0   2   164232.0 0.327 546010.0, 874474.0 2.16
AXB19/PgnJ m 501464.0 0.0   1   0.0 0.0 501464.0, 501464.0 1.08
AXB1/PgnJ m 841800.0 0.0   1   0.0 0.0 841800.0, 841800.0 2.84
AXB23/PgnJ m 240767.0 0.0   1   0.0 0.0 240767.0, 240767.0 -0.27
AXB24/PgnJ m 166772.0 100231.0   2   70874.0 0.601 95898.0, 237646.0 -0.66
AXB2/PgnJ m 268002.0 0.0   1   0.0 0.0 268002.0, 268002.0 -0.13
AXB4/PgnJ m 289949.0 0.0   1   0.0 0.0 289949.0, 289949.0 -0.02
AXB5/PgnJ m 220080.0 0.0   1   0.0 0.0 220080.0, 220080.0 -0.38
AXB6/PgnJ m 227259.0 0.0   1   0.0 0.0 227259.0, 227259.0 -0.34
AXB8/PgnJ m 88333.0 0.0   1   0.0 0.0 88333.0, 88333.0 -1.06
BALB/cJ m 171166.0 41842.0   3 24158.0 0.244 130139.0, 213778.0 -0.63
BTBR T+ Itpr3tf/J m 294078.0 0.0   1   0.0 0.0 294078.0, 294078.0 0.0
BUB/BnJ m 324601.0 0.0   1   0.0 0.0 324601.0, 324601.0 0.16
BXA11/PgnJ m 100128.0 0.0   1   0.0 0.0 100128.0, 100128.0 -1.0
BXA12/PgnJ m 177582.0 0.0   1   0.0 0.0 177582.0, 177582.0 -0.6
BXA13/PgnJ m 317421.0 0.0   1   0.0 0.0 317421.0, 317421.0 0.12
BXA14/PgnJ m 730382.0 0.0   1   0.0 0.0 730382.0, 730382.0 2.26
BXA16/PgnJ m 169580.0 58429.0   2   41316.0 0.345 128265.0, 210896.0 -0.64
BXA1/PgnJ m 133086.0 0.0   1   0.0 0.0 133086.0, 133086.0 -0.83
BXA24/PgnJ m 319450.0 0.0   1   0.0 0.0 319450.0, 319450.0 0.13
BXA25/PgnJ m 205082.0 0.0   1   0.0 0.0 205082.0, 205082.0 -0.46
BXA26/PgnJ m 269511.0 0.0   1   0.0 0.0 269511.0, 269511.0 -0.12
BXA2/PgnJ m 194710.0 0.0   1   0.0 0.0 194710.0, 194710.0 -0.51
BXA4/PgnJ m 237502.0 0.0   1   0.0 0.0 237502.0, 237502.0 -0.29
BXA7/PgnJ m 198441.0 0.0   1   0.0 0.0 198441.0, 198441.0 -0.49
BXA8/PgnJ m 142641.0 0.0   1   0.0 0.0 142641.0, 142641.0 -0.78
BXD11/TyJ m 141434.0 0.0   1   0.0 0.0 141434.0, 141434.0 -0.79
BXD12/TyJ m 885376.0 0.0   1   0.0 0.0 885376.0, 885376.0 3.07
BXD13/TyJ m 164070.0 0.0   1   0.0 0.0 164070.0, 164070.0 -0.67
BXD14/TyJ m 750015.0 0.0   1   0.0 0.0 750015.0, 750015.0 2.36
BXD15/TyJ m 318874.0 0.0   1   0.0 0.0 318874.0, 318874.0 0.13
BXD18/TyJ m 227625.0 0.0   1   0.0 0.0 227625.0, 227625.0 -0.34
BXD19/TyJ m 270956.0 12021.0   2   8500.0 0.0444 262456.0, 279456.0 -0.12
BXD1/TyJ m 219115.0 0.0   1   0.0 0.0 219115.0, 219115.0 -0.39
BXD20/TyJ m 350557.0 0.0   1   0.0 0.0 350557.0, 350557.0 0.3
BXD21/TyJ m 126807.0 0.0   1   0.0 0.0 126807.0, 126807.0 -0.86
BXD22/TyJ m 287353.0 0.0   1   0.0 0.0 287353.0, 287353.0 -0.03
BXD24/TyJ m 226164.0 0.0   1   0.0 0.0 226164.0, 226164.0 -0.35
BXD24/TyJ-Cep290rd16/J m 151348.0 0.0   1   0.0 0.0 151348.0, 151348.0 -0.74
BXD28/TyJ m 174831.0 58619.0   2   41450.0 0.335 133381.0, 216281.0 -0.61
BXD29-Tlr4lps-2J/J m 237502.0 0.0   1   0.0 0.0 237502.0, 237502.0 -0.29
BXD2/TyJ m 247379.0 0.0   1   0.0 0.0 247379.0, 247379.0 -0.24
BXD32/TyJ m 141996.0 0.0   1   0.0 0.0 141996.0, 141996.0 -0.78
BXD33/TyJ m 581888.0 0.0   1   0.0 0.0 581888.0, 581888.0 1.49
BXD34/TyJ m 132132.0 0.0   1   0.0 0.0 132132.0, 132132.0 -0.84
BXD36/TyJ m 72092.0 0.0   1   0.0 0.0 72092.0, 72092.0 -1.15
BXD38/TyJ m 524461.0 0.0   1   0.0 0.0 524461.0, 524461.0 1.2
BXD39/TyJ m 139135.0 0.0   1   0.0 0.0 139135.0, 139135.0 -0.8
BXD40/TyJ m 161566.0 0.0   1   0.0 0.0 161566.0, 161566.0 -0.68
BXD42/TyJ m 195108.0 0.0   1   0.0 0.0 195108.0, 195108.0 -0.51
BXD5/TyJ m 308365.0 0.0   1   0.0 0.0 308365.0, 308365.0 0.08
BXD6/TyJ m 356794.0 0.0   1   0.0 0.0 356794.0, 356794.0 0.33
BXD8/TyJ m 143671.0 0.0   1   0.0 0.0 143671.0, 143671.0 -0.78
BXD9/TyJ m 338484.0 0.0   1   0.0 0.0 338484.0, 338484.0 0.23
BXH10/TyJ m 327686.0 0.0   1   0.0 0.0 327686.0, 327686.0 0.18
BXH19/TyJ m 687706.0 0.0   1   0.0 0.0 687706.0, 687706.0 2.04
BXH20/KccJ m 322299.0 0.0   1   0.0 0.0 322299.0, 322299.0 0.15
BXH22/KccJ m 231996.0 0.0   1   0.0 0.0 231996.0, 231996.0 -0.32
BXH2/TyJ m 450803.0 0.0   1   0.0 0.0 450803.0, 450803.0 0.81
BXH4/TyJ m 299897.0 1241.0   2   877.0 0.00414 299019.0, 300774.0 0.03
BXH6/TyJ m 420975.0 0.0   1   0.0 0.0 420975.0, 420975.0 0.66
BXH7/TyJ m 529031.0 0.0   1   0.0 0.0 529031.0, 529031.0 1.22
BXH8/TyJ m 314314.0 0.0   1   0.0 0.0 314314.0, 314314.0 0.11
BXH9/TyJ m 161236.0 0.0   1   0.0 0.0 161236.0, 161236.0 -0.69
C3H/HeJ m 236189.0 66619.0   2   47107.0 0.282 189082.0, 283296.0 -0.3
C57BL/6J m 186673.0 58186.0   4 29093.0 0.312 127871.0, 251836.0 -0.55
C57L/J m 125126.0 0.0   1   0.0 0.0 125126.0, 125126.0 -0.87
C58/J m 524844.0 0.0   1   0.0 0.0 524844.0, 524844.0 1.2
CAST/EiJ m 844801.0 0.0   1   0.0 0.0 844801.0, 844801.0 2.86
CBA/J m 190046.0 0.0   1   0.0 0.0 190046.0, 190046.0 -0.54
CE/J m 231125.0 0.0   1   0.0 0.0 231125.0, 231125.0 -0.32
CXB11/HiAJ m 133573.0 146978.0   2   103929.0 1.1 29644.0, 237502.0 -0.83
CXB12/HiAJ m 151802.0 0.0   1   0.0 0.0 151802.0, 151802.0 -0.73
CXB13/HiAJ m 209325.0 57982.0   3 33476.0 0.277 155762.0, 270895.0 -0.44
CXB1/ByJ m 402958.0 178132.0   3 102844.0 0.442 251337.0, 599139.0 0.57
CXB2/ByJ m 186374.0 0.0   1   0.0 0.0 186374.0, 186374.0 -0.55
CXB3/ByJ m 255930.0 30678.0   2   21693.0 0.12 234238.0, 277623.0 -0.19
CXB4/ByJ m 111330.0 71966.0   2   50887.0 0.646 60443.0, 162218.0 -0.94
CXB6/ByJ m 214813.0 0.0   1   0.0 0.0 214813.0, 214813.0 -0.41
CXB7/ByJ m 180912.0 43328.0   2   30638.0 0.239 150274.0, 211549.0 -0.58
CXB8/HiAJ m 282461.0 177260.0   3 102341.0 0.628 77790.0, 386689.0 -0.06
CXB9/HiAJ m 32994.0 0.0   1   0.0 0.0 32994.0, 32994.0 -1.35
DBA/2J m 269069.0 83992.0   4 41996.0 0.312 187241.0, 386331.0 -0.13
FVB/NJ m 418035.0 0.0   1   0.0 0.0 418035.0, 418035.0 0.64
I/LnJ m 262058.0 0.0   1   0.0 0.0 262058.0, 262058.0 -0.16
KK/HlJ m 192470.0 0.0   1   0.0 0.0 192470.0, 192470.0 -0.52
LG/J m 565394.0 0.0   1   0.0 0.0 565394.0, 565394.0 1.41
LP/J m 369282.0 0.0   1   0.0 0.0 369282.0, 369282.0 0.39
MA/MyJ m 137258.0 0.0   1   0.0 0.0 137258.0, 137258.0 -0.81
NOD/ShiLtJ m 166240.0 0.0   1   0.0 0.0 166240.0, 166240.0 -0.66
NON/ShiLtJ m 991576.0 0.0   1   0.0 0.0 991576.0, 991576.0 3.62
NZW/LacJ m 267095.0 0.0   1   0.0 0.0 267095.0, 267095.0 -0.14
PL/J m 361456.0 0.0   1   0.0 0.0 361456.0, 361456.0 0.35
RIIIS/J m 77067.0 0.0   1   0.0 0.0 77067.0, 77067.0 -1.12
SEA/GnJ m 330610.0 0.0   1   0.0 0.0 330610.0, 330610.0 0.19
SJL/J m 707149.0 0.0   1   0.0 0.0 707149.0, 707149.0 2.14
SM/J m 527758.0 0.0   1   0.0 0.0 527758.0, 527758.0 1.21
SWR/J m 279156.0 0.0   1   0.0 0.0 279156.0, 279156.0 -0.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
AXB19b/PgnJ m 710241.95 73874.8825 862390.1186 558093.7814
AXB24/PgnJ m 166771.85 73874.8825 318920.0186 14623.6814
BALB/cJ m 171165.5333 60318.589 295393.9928 46937.0739
BXA16/PgnJ m 169580.4 73874.8825 321728.5686 17432.2314
BXD19/TyJ m 270956.25 73874.8825 423104.4186 118808.0814
BXD28/TyJ m 174830.85 73874.8825 326979.0186 22682.6814
BXH4/TyJ m 299896.6 73874.8825 452044.7686 147748.4314
C3H/HeJ m 236189.2 73874.8825 388337.3686 84041.0314
C57BL/6J m 186672.8 52237.4304 294257.8017 79087.7983
CXB11/HiAJ m 133572.85 73874.8825 285721.0186 0.0
CXB13/HiAJ m 209324.5333 60318.589 333552.9928 85096.0739
CXB1/ByJ m 402958.1 60318.589 527186.5594 278729.6406
CXB3/ByJ m 255930.1 73874.8825 408078.2686 103781.9314
CXB4/ByJ m 111330.5 73874.8825 263478.6686 0.0
CXB7/ByJ m 180911.6 73874.8825 333059.7686 28763.4314
CXB8/HiAJ m 282461.1667 60318.589 406689.6261 158232.7072
DBA/2J m 269069.125 52237.4304 376654.1267 161484.1233




  GWAS USING LINEAR MIXED MODELS