Project measure / variable:   HMDPpheno9   DPGPEA

ID, description, units MPD:50405   DPGPEA   liver 2-docosapentaenoylglycerophosphoethanolamine (16h fast), relative abundance    
Data set, strains HMDPpheno9   HMDP   100 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno9 - liver 2-docosapentaenoylglycerophosphoethanolamine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested100 strains
Mean of the strain means208611   None
Median of the strain means159849   None
SD of the strain means± 164228
Coefficient of variation (CV)0.787
Min–max range of strain means19183   –   745990   None
Mean sample size per strain1.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 16 839781793512.863 52486362094.5539 3.8722 0.0016
Residuals 23 311754519302.944 13554544317.5193


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 239236.0 0.0   1   0.0 0.0 239236.0, 239236.0 0.19
A/J m 66757.0 9827.0   2   6949.0 0.147 59808.0, 73706.0 -0.86
AKR/J m 158430.0 0.0   1   0.0 0.0 158430.0, 158430.0 -0.31
AXB10/PgnJ m 88318.0 0.0   1   0.0 0.0 88318.0, 88318.0 -0.73
AXB15/PgnJ m 51418.0 0.0   1   0.0 0.0 51418.0, 51418.0 -0.96
AXB19a/PgnJ m 146571.0 0.0   1   0.0 0.0 146571.0, 146571.0 -0.38
AXB19b/PgnJ m 745990.0 258857.0   2   183039.0 0.347 562951.0, 929029.0 3.27
AXB19/PgnJ m 381770.0 0.0   1   0.0 0.0 381770.0, 381770.0 1.05
AXB1/PgnJ m 712474.0 0.0   1   0.0 0.0 712474.0, 712474.0 3.07
AXB23/PgnJ m 132420.0 0.0   1   0.0 0.0 132420.0, 132420.0 -0.46
AXB24/PgnJ m 159584.0 0.0   1   0.0 0.0 159584.0, 159584.0 -0.3
AXB2/PgnJ m 128265.0 0.0   1   0.0 0.0 128265.0, 128265.0 -0.49
AXB4/PgnJ m 367149.0 0.0   1   0.0 0.0 367149.0, 367149.0 0.97
AXB5/PgnJ m 106593.0 0.0   1   0.0 0.0 106593.0, 106593.0 -0.62
AXB6/PgnJ m 168009.0 0.0   1   0.0 0.0 168009.0, 168009.0 -0.25
AXB8/PgnJ m 82212.0 0.0   1   0.0 0.0 82212.0, 82212.0 -0.77
BALB/cJ m 93849.0 52662.0   2   37238.0 0.561 56611.0, 131087.0 -0.7
BTBR T+ Itpr3tf/J m 136248.0 0.0   1   0.0 0.0 136248.0, 136248.0 -0.44
BUB/BnJ m 171980.0 0.0   1   0.0 0.0 171980.0, 171980.0 -0.22
BXA12/PgnJ m 96409.0 0.0   1   0.0 0.0 96409.0, 96409.0 -0.68
BXA13/PgnJ m 288217.0 0.0   1   0.0 0.0 288217.0, 288217.0 0.48
BXA14/PgnJ m 626756.0 0.0   1   0.0 0.0 626756.0, 626756.0 2.55
BXA16/PgnJ m 111920.0 46398.0   2   32809.0 0.415 79111.0, 144728.0 -0.59
BXA24/PgnJ m 188671.0 0.0   1   0.0 0.0 188671.0, 188671.0 -0.12
BXA25/PgnJ m 96974.0 0.0   1   0.0 0.0 96974.0, 96974.0 -0.68
BXA26/PgnJ m 216864.0 0.0   1   0.0 0.0 216864.0, 216864.0 0.05
BXA2/PgnJ m 122350.0 0.0   1   0.0 0.0 122350.0, 122350.0 -0.53
BXA4/PgnJ m 122947.0 0.0   1   0.0 0.0 122947.0, 122947.0 -0.52
BXA7/PgnJ m 144036.0 0.0   1   0.0 0.0 144036.0, 144036.0 -0.39
BXA8/PgnJ m 94924.0 0.0   1   0.0 0.0 94924.0, 94924.0 -0.69
BXD11/TyJ m 105617.0 0.0   1   0.0 0.0 105617.0, 105617.0 -0.63
BXD12/TyJ m 364143.0 0.0   1   0.0 0.0 364143.0, 364143.0 0.95
BXD13/TyJ m 95050.0 0.0   1   0.0 0.0 95050.0, 95050.0 -0.69
BXD14/TyJ m 377106.0 0.0   1   0.0 0.0 377106.0, 377106.0 1.03
BXD15/TyJ m 172272.0 0.0   1   0.0 0.0 172272.0, 172272.0 -0.22
BXD18/TyJ m 64095.0 0.0   1   0.0 0.0 64095.0, 64095.0 -0.88
BXD19/TyJ m 160114.0 2382.0   2   1684.0 0.0149 158430.0, 161798.0 -0.3
BXD20/TyJ m 302177.0 0.0   1   0.0 0.0 302177.0, 302177.0 0.57
BXD22/TyJ m 158430.0 0.0   1   0.0 0.0 158430.0, 158430.0 -0.31
BXD24/TyJ m 90590.0 0.0   1   0.0 0.0 90590.0, 90590.0 -0.72
BXD24/TyJ-Cep290rd16/J m 138395.0 0.0   1   0.0 0.0 138395.0, 138395.0 -0.43
BXD28/TyJ m 94545.0 35554.0   2   25140.0 0.376 69404.0, 119685.0 -0.69
BXD29-Tlr4lps-2J/J m 179311.0 0.0   1   0.0 0.0 179311.0, 179311.0 -0.18
BXD2/TyJ m 222202.0 0.0   1   0.0 0.0 222202.0, 222202.0 0.08
BXD32/TyJ m 59635.0 0.0   1   0.0 0.0 59635.0, 59635.0 -0.91
BXD33/TyJ m 429115.0 0.0   1   0.0 0.0 429115.0, 429115.0 1.34
BXD34/TyJ m 153230.0 0.0   1   0.0 0.0 153230.0, 153230.0 -0.34
BXD36/TyJ m 69961.0 0.0   1   0.0 0.0 69961.0, 69961.0 -0.84
BXD38/TyJ m 157306.0 0.0   1   0.0 0.0 157306.0, 157306.0 -0.31
BXD39/TyJ m 137554.0 0.0   1   0.0 0.0 137554.0, 137554.0 -0.43
BXD40/TyJ m 122877.0 0.0   1   0.0 0.0 122877.0, 122877.0 -0.52
BXD42/TyJ m 168398.0 0.0   1   0.0 0.0 168398.0, 168398.0 -0.24
BXD5/TyJ m 162643.0 0.0   1   0.0 0.0 162643.0, 162643.0 -0.28
BXD6/TyJ m 193872.0 0.0   1   0.0 0.0 193872.0, 193872.0 -0.09
BXD8/TyJ m 52988.0 0.0   1   0.0 0.0 52988.0, 52988.0 -0.95
BXD9/TyJ m 252678.0 0.0   1   0.0 0.0 252678.0, 252678.0 0.27
BXH10/TyJ m 136781.0 0.0   1   0.0 0.0 136781.0, 136781.0 -0.44
BXH19/TyJ m 684291.0 0.0   1   0.0 0.0 684291.0, 684291.0 2.9
BXH20/KccJ m 154448.0 0.0   1   0.0 0.0 154448.0, 154448.0 -0.33
BXH22/KccJ m 161628.0 0.0   1   0.0 0.0 161628.0, 161628.0 -0.29
BXH2/TyJ m 245894.0 0.0   1   0.0 0.0 245894.0, 245894.0 0.23
BXH4/TyJ m 201674.0 101586.0   2   71832.0 0.504 129841.0, 273506.0 -0.04
BXH6/TyJ m 255135.0 0.0   1   0.0 0.0 255135.0, 255135.0 0.28
BXH7/TyJ m 376944.0 0.0   1   0.0 0.0 376944.0, 376944.0 1.02
BXH8/TyJ m 198841.0 0.0   1   0.0 0.0 198841.0, 198841.0 -0.06
BXH9/TyJ m 162854.0 0.0   1   0.0 0.0 162854.0, 162854.0 -0.28
C3H/HeJ m 160623.0 1512.0   2   1069.0 0.00941 159554.0, 161692.0 -0.29
C57BL/6J m 99960.0 58384.0   4 29192.0 0.584 50655.0, 178425.0 -0.66
C57L/J m 55837.0 0.0   1   0.0 0.0 55837.0, 55837.0 -0.93
C58/J m 668109.0 0.0   1   0.0 0.0 668109.0, 668109.0 2.8
CAST/EiJ m 652265.0 0.0   1   0.0 0.0 652265.0, 652265.0 2.7
CBA/J m 131327.0 0.0   1   0.0 0.0 131327.0, 131327.0 -0.47
CE/J m 189784.0 0.0   1   0.0 0.0 189784.0, 189784.0 -0.11
CXB11/HiAJ m 192788.0 0.0   1   0.0 0.0 192788.0, 192788.0 -0.1
CXB12/HiAJ m 77883.0 0.0   1   0.0 0.0 77883.0, 77883.0 -0.8
CXB13/HiAJ m 161082.0 151970.0   2   107459.0 0.943 53623.0, 268541.0 -0.29
CXB1/ByJ m 282373.0 220460.0   3 127283.0 0.781 120414.0, 533440.0 0.45
CXB2/ByJ m 116280.0 69599.0   2   49214.0 0.599 67066.0, 165493.0 -0.56
CXB3/ByJ m 166242.0 17005.0   2   12025.0 0.102 154218.0, 178267.0 -0.26
CXB4/ByJ m 19183.0 0.0   1   0.0 0.0 19183.0, 19183.0 -1.15
CXB6/ByJ m 70407.0 62520.0   2   44208.0 0.888 26199.0, 114615.0 -0.84
CXB7/ByJ m 131060.0 58513.0   2   41375.0 0.446 89685.0, 172435.0 -0.47
CXB8/HiAJ m 292658.0 184133.0   3 106309.0 0.629 118501.0, 485363.0 0.51
CXB9/HiAJ m 86942.0 0.0   1   0.0 0.0 86942.0, 86942.0 -0.74
DBA/2J m 177315.0 76007.0   4 38003.0 0.429 75503.0, 257697.0 -0.19
FVB/NJ m 157759.0 0.0   1   0.0 0.0 157759.0, 157759.0 -0.31
I/LnJ m 271978.0 0.0   1   0.0 0.0 271978.0, 271978.0 0.39
KK/HlJ m 164175.0 0.0   1   0.0 0.0 164175.0, 164175.0 -0.27
LG/J m 511559.0 0.0   1   0.0 0.0 511559.0, 511559.0 1.84
LP/J m 293038.0 0.0   1   0.0 0.0 293038.0, 293038.0 0.51
MA/MyJ m 72047.0 0.0   1   0.0 0.0 72047.0, 72047.0 -0.83
NOD/ShiLtJ m 119720.0 0.0   1   0.0 0.0 119720.0, 119720.0 -0.54
NON/ShiLtJ m 723239.0 0.0   1   0.0 0.0 723239.0, 723239.0 3.13
NZW/LacJ m 75148.0 0.0   1   0.0 0.0 75148.0, 75148.0 -0.81
PL/J m 226780.0 0.0   1   0.0 0.0 226780.0, 226780.0 0.11
RIIIS/J m 34271.0 0.0   1   0.0 0.0 34271.0, 34271.0 -1.06
SEA/GnJ m 174403.0 0.0   1   0.0 0.0 174403.0, 174403.0 -0.21
SJL/J m 534579.0 0.0   1   0.0 0.0 534579.0, 534579.0 1.98
SM/J m 316351.0 0.0   1   0.0 0.0 316351.0, 316351.0 0.66
SWR/J m 143779.0 0.0   1   0.0 0.0 143779.0, 143779.0 -0.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 66757.0 82324.1894 237057.5609 0.0
AXB19b/PgnJ m 745990.15 82324.1894 916290.7109 575689.5891
BALB/cJ m 93849.05 82324.1894 264149.6109 0.0
BXA16/PgnJ m 111919.8 82324.1894 282220.3609 0.0
BXD19/TyJ m 160114.2 82324.1894 330414.7609 0.0
BXD28/TyJ m 94544.7 82324.1894 264845.2609 0.0
BXH4/TyJ m 201673.5 82324.1894 371974.0609 31372.9391
C3H/HeJ m 160623.1 82324.1894 330923.6609 0.0
C57BL/6J m 99960.0 58211.9926 220380.6815 0.0
CXB13/HiAJ m 161081.95 82324.1894 331382.5109 0.0
CXB1/ByJ m 282372.9333 67217.4192 421422.759 143323.1076
CXB2/ByJ m 116279.5 82324.1894 286580.0609 0.0
CXB3/ByJ m 166242.45 82324.1894 336543.0109 0.0
CXB6/ByJ m 70406.85 82324.1894 240707.4109 0.0
CXB7/ByJ m 131060.15 82324.1894 301360.7109 0.0
CXB8/HiAJ m 292658.2 67217.4192 431708.0257 153608.3743
DBA/2J m 177315.125 58211.9926 297735.8065 56894.4435




  GWAS USING LINEAR MIXED MODELS