Phenotype measure:   HMDPpheno8   SOT

ID, description, units MPD:50380   SOT   liver 1-stearoylglycerol (1-monostearin) (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver 1-stearoylglycerol (1-monostearin) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means686779   None
Median of the strain means688101   None
SD of the strain means± 99586
Coefficient of variation (CV)0.145
Min–max range of strain means456451   –   995252   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 511200061369.013 24342860065.1911 0.8155 0.6841
Residuals 34 1014903602604.07 29850105958.9433


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 595059.0 0.0   1   0.0 0.0 595059.0, 595059.0 -0.92
A/J m 685923.0 85947.0   2   60774.0 0.125 625149.0, 746696.0 -0.01
AKR/J m 690279.0 0.0   1   0.0 0.0 690279.0, 690279.0 0.04
AXB10/PgnJ m 691192.0 0.0   1   0.0 0.0 691192.0, 691192.0 0.04
AXB12/PgnJ m 581687.0 0.0   1   0.0 0.0 581687.0, 581687.0 -1.06
AXB13/PgnJ m 632770.0 0.0   1   0.0 0.0 632770.0, 632770.0 -0.54
AXB15/PgnJ m 560462.0 0.0   1   0.0 0.0 560462.0, 560462.0 -1.27
AXB19a/PgnJ m 680402.0 0.0   1   0.0 0.0 680402.0, 680402.0 -0.06
AXB19b/PgnJ m 617372.0 45279.0   2   32017.0 0.0733 585355.0, 649389.0 -0.7
AXB19/PgnJ m 699238.0 0.0   1   0.0 0.0 699238.0, 699238.0 0.13
AXB1/PgnJ m 679907.0 0.0   1   0.0 0.0 679907.0, 679907.0 -0.07
AXB23/PgnJ m 781517.0 0.0   1   0.0 0.0 781517.0, 781517.0 0.95
AXB24/PgnJ m 784239.0 257644.0   2   182182.0 0.329 602057.0, 966421.0 0.98
AXB2/PgnJ m 739162.0 0.0   1   0.0 0.0 739162.0, 739162.0 0.53
AXB4/PgnJ m 692519.0 0.0   1   0.0 0.0 692519.0, 692519.0 0.06
AXB5/PgnJ m 665003.0 0.0   1   0.0 0.0 665003.0, 665003.0 -0.22
AXB6/PgnJ m 589932.0 0.0   1   0.0 0.0 589932.0, 589932.0 -0.97
AXB8/PgnJ m 691607.0 0.0   1   0.0 0.0 691607.0, 691607.0 0.05
BALB/cJ m 747915.0 89768.0   3 51828.0 0.12 646833.0, 818333.0 0.61
BTBR T+ Itpr3tf/J m 680238.0 0.0   1   0.0 0.0 680238.0, 680238.0 -0.07
BUB/BnJ m 641550.0 0.0   1   0.0 0.0 641550.0, 641550.0 -0.45
BXA11/PgnJ m 778550.0 0.0   1   0.0 0.0 778550.0, 778550.0 0.92
BXA12/PgnJ m 528466.0 0.0   1   0.0 0.0 528466.0, 528466.0 -1.59
BXA13/PgnJ m 554716.0 0.0   1   0.0 0.0 554716.0, 554716.0 -1.33
BXA14/PgnJ m 594434.0 0.0   1   0.0 0.0 594434.0, 594434.0 -0.93
BXA16/PgnJ m 618972.0 94330.0   2   66702.0 0.152 552270.0, 685673.0 -0.68
BXA1/PgnJ m 656676.0 0.0   1   0.0 0.0 656676.0, 656676.0 -0.3
BXA24/PgnJ m 742695.0 0.0   1   0.0 0.0 742695.0, 742695.0 0.56
BXA25/PgnJ m 500342.0 0.0   1   0.0 0.0 500342.0, 500342.0 -1.87
BXA26/PgnJ m 872736.0 0.0   1   0.0 0.0 872736.0, 872736.0 1.87
BXA2/PgnJ m 691376.0 0.0   1   0.0 0.0 691376.0, 691376.0 0.05
BXA4/PgnJ m 570143.0 0.0   1   0.0 0.0 570143.0, 570143.0 -1.17
BXA7/PgnJ m 602451.0 0.0   1   0.0 0.0 602451.0, 602451.0 -0.85
BXA8/PgnJ m 671210.0 0.0   1   0.0 0.0 671210.0, 671210.0 -0.16
BXD11/TyJ m 737702.0 0.0   1   0.0 0.0 737702.0, 737702.0 0.51
BXD12/TyJ m 693661.0 0.0   1   0.0 0.0 693661.0, 693661.0 0.07
BXD13/TyJ m 792953.0 0.0   1   0.0 0.0 792953.0, 792953.0 1.07
BXD14/TyJ m 552832.0 0.0   1   0.0 0.0 552832.0, 552832.0 -1.35
BXD15/TyJ m 783013.0 0.0   1   0.0 0.0 783013.0, 783013.0 0.97
BXD18/TyJ m 623858.0 0.0   1   0.0 0.0 623858.0, 623858.0 -0.63
BXD19/TyJ m 675328.0 105250.0   2   74423.0 0.156 600906.0, 749751.0 -0.11
BXD1/TyJ m 701639.0 0.0   1   0.0 0.0 701639.0, 701639.0 0.15
BXD20/TyJ m 822468.0 0.0   1   0.0 0.0 822468.0, 822468.0 1.36
BXD21/TyJ m 509432.0 0.0   1   0.0 0.0 509432.0, 509432.0 -1.78
BXD22/TyJ m 735232.0 0.0   1   0.0 0.0 735232.0, 735232.0 0.49
BXD24/TyJ m 595146.0 0.0   1   0.0 0.0 595146.0, 595146.0 -0.92
BXD24/TyJ-Cep290rd16/J m 611026.0 0.0   1   0.0 0.0 611026.0, 611026.0 -0.76
BXD28/TyJ m 456451.0 388477.0   2   274695.0 0.851 181756.0, 731146.0 -2.31
BXD29-Tlr4lps-2J/J m 810386.0 0.0   1   0.0 0.0 810386.0, 810386.0 1.24
BXD2/TyJ m 586735.0 0.0   1   0.0 0.0 586735.0, 586735.0 -1.0
BXD32/TyJ m 700089.0 0.0   1   0.0 0.0 700089.0, 700089.0 0.13
BXD33/TyJ m 734973.0 0.0   1   0.0 0.0 734973.0, 734973.0 0.48
BXD34/TyJ m 698523.0 0.0   1   0.0 0.0 698523.0, 698523.0 0.12
BXD36/TyJ m 625666.0 0.0   1   0.0 0.0 625666.0, 625666.0 -0.61
BXD38/TyJ m 711737.0 0.0   1   0.0 0.0 711737.0, 711737.0 0.25
BXD39/TyJ m 692334.0 0.0   1   0.0 0.0 692334.0, 692334.0 0.06
BXD40/TyJ m 725435.0 0.0   1   0.0 0.0 725435.0, 725435.0 0.39
BXD42/TyJ m 616097.0 0.0   1   0.0 0.0 616097.0, 616097.0 -0.71
BXD5/TyJ m 748884.0 0.0   1   0.0 0.0 748884.0, 748884.0 0.62
BXD6/TyJ m 572636.0 0.0   1   0.0 0.0 572636.0, 572636.0 -1.15
BXD8/TyJ m 593193.0 0.0   1   0.0 0.0 593193.0, 593193.0 -0.94
BXD9/TyJ m 669213.0 0.0   1   0.0 0.0 669213.0, 669213.0 -0.18
BXH10/TyJ m 485322.0 0.0   1   0.0 0.0 485322.0, 485322.0 -2.02
BXH19/TyJ m 626939.0 0.0   1   0.0 0.0 626939.0, 626939.0 -0.6
BXH20/KccJ m 995252.0 0.0   1   0.0 0.0 995252.0, 995252.0 3.1
BXH22/KccJ m 762355.0 0.0   1   0.0 0.0 762355.0, 762355.0 0.76
BXH2/TyJ m 716766.0 0.0   1   0.0 0.0 716766.0, 716766.0 0.3
BXH4/TyJ m 724369.0 43688.0   2   30892.0 0.0603 693477.0, 755261.0 0.38
BXH6/TyJ m 862850.0 0.0   1   0.0 0.0 862850.0, 862850.0 1.77
BXH7/TyJ m 674157.0 0.0   1   0.0 0.0 674157.0, 674157.0 -0.13
BXH8/TyJ m 765713.0 0.0   1   0.0 0.0 765713.0, 765713.0 0.79
BXH9/TyJ m 708215.0 0.0   1   0.0 0.0 708215.0, 708215.0 0.22
C3H/HeJ m 647401.0 183976.0   2   130091.0 0.284 517310.0, 777492.0 -0.4
C57BL/6J m 745462.0 63241.0   5 28282.0 0.0848 663547.0, 809335.0 0.59
C57L/J m 516522.0 0.0   1   0.0 0.0 516522.0, 516522.0 -1.71
C58/J m 789585.0 0.0   1   0.0 0.0 789585.0, 789585.0 1.03
CAST/EiJ m 741574.0 0.0   1   0.0 0.0 741574.0, 741574.0 0.55
CBA/J m 583906.0 0.0   1   0.0 0.0 583906.0, 583906.0 -1.03
CE/J m 592108.0 0.0   1   0.0 0.0 592108.0, 592108.0 -0.95
CXB11/HiAJ m 674742.0 123520.0   2   87342.0 0.183 587400.0, 762083.0 -0.12
CXB12/HiAJ m 830648.0 224454.0   2   158713.0 0.27 671935.0, 989362.0 1.44
CXB13/HiAJ m 822036.0 110755.0   3 63945.0 0.135 696524.0, 906047.0 1.36
CXB1/ByJ m 817589.0 63753.0   3 36808.0 0.078 747511.0, 872151.0 1.31
CXB2/ByJ m 721759.0 49808.0   3 28757.0 0.069 664785.0, 757054.0 0.35
CXB3/ByJ m 822264.0 58928.0   2   41669.0 0.0717 780596.0, 863933.0 1.36
CXB4/ByJ m 696164.0 153874.0   2   108805.0 0.221 587358.0, 804969.0 0.09
CXB6/ByJ m 676236.0 110990.0   3 64080.0 0.164 575002.0, 794915.0 -0.11
CXB7/ByJ m 816956.0 158742.0   2   112247.0 0.194 704709.0, 929203.0 1.31
CXB8/HiAJ m 648918.0 101841.0   3 58798.0 0.157 531708.0, 715773.0 -0.38
CXB9/HiAJ m 937155.0 498473.0   3 287794.0 0.532 546741.0, 1498638.0 2.51
DBA/2J m 669765.0 28193.0   4 14096.0 0.0421 636509.0, 699394.0 -0.17
FVB/NJ m 659804.0 0.0   1   0.0 0.0 659804.0, 659804.0 -0.27
I/LnJ m 505218.0 0.0   1   0.0 0.0 505218.0, 505218.0 -1.82
KK/HlJ m 746522.0 0.0   1   0.0 0.0 746522.0, 746522.0 0.6
LG/J m 638442.0 0.0   1   0.0 0.0 638442.0, 638442.0 -0.49
LP/J m 561842.0 0.0   1   0.0 0.0 561842.0, 561842.0 -1.25
MA/MyJ m 730662.0 0.0   1   0.0 0.0 730662.0, 730662.0 0.44
NOD/ShiLtJ m 685541.0 0.0   1   0.0 0.0 685541.0, 685541.0 -0.01
NON/ShiLtJ m 847444.0 0.0   1   0.0 0.0 847444.0, 847444.0 1.61
NZW/LacJ m 630096.0 0.0   1   0.0 0.0 630096.0, 630096.0 -0.57
PL/J m 740138.0 0.0   1   0.0 0.0 740138.0, 740138.0 0.54
RIIIS/J m 872939.0 0.0   1   0.0 0.0 872939.0, 872939.0 1.87
SEA/GnJ m 647807.0 0.0   1   0.0 0.0 647807.0, 647807.0 -0.39
SJL/J m 575989.0 0.0   1   0.0 0.0 575989.0, 575989.0 -1.11
SM/J m 774650.0 0.0   1   0.0 0.0 774650.0, 774650.0 0.88
SWR/J m 821364.0 0.0   1   0.0 0.0 821364.0, 821364.0 1.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 685922.85 122168.1341 934198.3697 437647.3303
AXB19b/PgnJ m 617372.35 122168.1341 865647.8697 369096.8303
AXB24/PgnJ m 784238.85 122168.1341 1032514.3697 535963.3303
BALB/cJ m 747915.1 99749.8638 950631.2129 545198.9871
BXA16/PgnJ m 618971.7 122168.1341 867247.2197 370696.1803
BXD19/TyJ m 675328.45 122168.1341 923603.9697 427052.9303
BXD28/TyJ m 456450.8 122168.1341 704726.3197 208175.2803
BXH4/TyJ m 724369.05 122168.1341 972644.5697 476093.5303
C3H/HeJ m 647401.0 122168.1341 895676.5197 399125.4803
C57BL/6J m 745461.62 77265.9122 902484.8459 588438.3941
CXB11/HiAJ m 674741.75 122168.1341 923017.2697 426466.2303
CXB12/HiAJ m 830648.4 122168.1341 1078923.9197 582372.8803
CXB13/HiAJ m 822036.3 99749.8638 1024752.4129 619320.1871
CXB1/ByJ m 817589.3 99749.8638 1020305.4129 614873.1871
CXB2/ByJ m 721758.5667 99749.8638 924474.6796 519042.4537
CXB3/ByJ m 822264.5 122168.1341 1070540.0197 573988.9803
CXB4/ByJ m 696163.8 122168.1341 944439.3197 447888.2803
CXB6/ByJ m 676236.2333 99749.8638 878952.3463 473520.1204
CXB7/ByJ m 816956.0 122168.1341 1065231.5197 568680.4803
CXB8/HiAJ m 648917.5667 99749.8638 851633.6796 446201.4537
CXB9/HiAJ m 937155.1333 99749.8638 1139871.2463 734439.0204
DBA/2J m 669765.125 86385.916 845322.4286 494207.8214




  GWAS USING LINEAR MIXED MODELS