Project measure / variable:   HMDPpheno8   pelargonate

ID, description, units MPD:50375   pelargonate   liver pelargonate (9:0) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

HMDPpheno8 - liver pelargonate (9:0) (16h fast), relative abundance

BUB/BnJSM/JNOD/ShiLtJPL/JBXD34/TyJBXD12/TyJCE/JAXB2/PgnJ129X1/SvJBXD29-Tlr4<lps-2J>/JMA/MyJI/LnJBXD11/TyJBXD40/TyJAXB15/PgnJBXH22/KccJBXH10/TyJSEA/GnJAXB1/PgnJCBA/JC57BL/6JBXA26/PgnJCXB2/ByJNZW/LacJCXB6/ByJAXB13/PgnJC57L/JAXB19b/PgnJSWR/JAXB23/PgnJKK/HlJCXB9/HiAJFVB/NJRIIIS/JAXB19/PgnJNON/ShiLtJA/JAKR/JCXB11/HiAJBALB/cJBXA12/PgnJDBA/2JLG/JAXB4/PgnJCXB1/ByJAXB6/PgnJBXA24/PgnJCXB13/HiAJBXA11/PgnJBXD24/TyJBXD38/TyJCXB7/ByJBXA13/PgnJBXA7/PgnJAXB19a/PgnJC3H/HeJCAST/EiJBXD32/TyJBXD8/TyJBXD24/TyJ-Cep290<rd16>/JBXD18/TyJBXA8/PgnJBXH8/TyJBXH2/TyJBXH7/TyJBXH4/TyJBXH20/KccJCXB12/HiAJCXB3/ByJBXA16/PgnJBXD36/TyJAXB10/PgnJCXB8/HiAJBXH19/TyJBXD19/TyJBXD33/TyJBXD5/TyJBXD9/TyJBXH9/TyJBXD42/TyJBXD1/TyJBXD28/TyJBXD22/TyJLP/JBXD39/TyJBXA4/PgnJAXB12/PgnJBXD20/TyJBXA1/PgnJAXB5/PgnJBXD2/TyJBXD15/TyJBXA25/PgnJBXD6/TyJAXB8/PgnJSJL/JBXD14/TyJBXD21/TyJBXD13/TyJBXA2/PgnJC58/JCXB4/ByJBTBR T<+> Itpr3<tf>/JAXB24/PgnJBXH6/TyJBXA14/PgnJ (no units) 50,00060,00070,00080,00090,000100,000110,000120,000130,000140,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means86509   None
Median of the strain means84362   None
SD of the strain means± 18134
Coefficient of variation (CV)0.210
Min–max range of strain means49250   –   137574   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 7142249628.8725 340107125.1844 1.7443 0.0725
Residuals 34 6629346680.0247 194980784.7066


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 115834.0 0.0   1   0.0 0.0 115834.0, 115834.0 1.62
A/J m 92265.0 15092.0   2   10671.0 0.164 81594.0, 102937.0 0.32
AKR/J m 91510.0 0.0   1   0.0 0.0 91510.0, 91510.0 0.28
AXB10/PgnJ m 75236.0 0.0   1   0.0 0.0 75236.0, 75236.0 -0.62
AXB12/PgnJ m 69619.0 0.0   1   0.0 0.0 69619.0, 69619.0 -0.93
AXB13/PgnJ m 98523.0 0.0   1   0.0 0.0 98523.0, 98523.0 0.66
AXB15/PgnJ m 105966.0 0.0   1   0.0 0.0 105966.0, 105966.0 1.07
AXB19a/PgnJ m 83821.0 0.0   1   0.0 0.0 83821.0, 83821.0 -0.15
AXB19b/PgnJ m 97064.0 19043.0   2   13465.0 0.196 83599.0, 110530.0 0.58
AXB19/PgnJ m 93402.0 0.0   1   0.0 0.0 93402.0, 93402.0 0.38
AXB1/PgnJ m 103754.0 0.0   1   0.0 0.0 103754.0, 103754.0 0.95
AXB23/PgnJ m 96816.0 0.0   1   0.0 0.0 96816.0, 96816.0 0.57
AXB24/PgnJ m 58480.0 12898.0   2   9120.0 0.221 49360.0, 67600.0 -1.55
AXB2/PgnJ m 116189.0 0.0   1   0.0 0.0 116189.0, 116189.0 1.64
AXB4/PgnJ m 89385.0 0.0   1   0.0 0.0 89385.0, 89385.0 0.16
AXB5/PgnJ m 68685.0 0.0   1   0.0 0.0 68685.0, 68685.0 -0.98
AXB6/PgnJ m 87964.0 0.0   1   0.0 0.0 87964.0, 87964.0 0.08
AXB8/PgnJ m 66624.0 0.0   1   0.0 0.0 66624.0, 66624.0 -1.1
BALB/cJ m 90369.0 20551.0   3 11865.0 0.227 77805.0, 114085.0 0.21
BTBR T+ Itpr3tf/J m 63464.0 0.0   1   0.0 0.0 63464.0, 63464.0 -1.27
BUB/BnJ m 137574.0 0.0   1   0.0 0.0 137574.0, 137574.0 2.82
BXA11/PgnJ m 86084.0 0.0   1   0.0 0.0 86084.0, 86084.0 -0.02
BXA12/PgnJ m 90087.0 0.0   1   0.0 0.0 90087.0, 90087.0 0.2
BXA13/PgnJ m 84576.0 0.0   1   0.0 0.0 84576.0, 84576.0 -0.11
BXA14/PgnJ m 49250.0 0.0   1   0.0 0.0 49250.0, 49250.0 -2.05
BXA16/PgnJ m 75908.0 2197.0   2   1554.0 0.0289 74354.0, 77462.0 -0.58
BXA1/PgnJ m 68932.0 0.0   1   0.0 0.0 68932.0, 68932.0 -0.97
BXA24/PgnJ m 87402.0 0.0   1   0.0 0.0 87402.0, 87402.0 0.05
BXA25/PgnJ m 67490.0 0.0   1   0.0 0.0 67490.0, 67490.0 -1.05
BXA26/PgnJ m 100031.0 0.0   1   0.0 0.0 100031.0, 100031.0 0.75
BXA2/PgnJ m 64043.0 0.0   1   0.0 0.0 64043.0, 64043.0 -1.24
BXA4/PgnJ m 69760.0 0.0   1   0.0 0.0 69760.0, 69760.0 -0.92
BXA7/PgnJ m 84148.0 0.0   1   0.0 0.0 84148.0, 84148.0 -0.13
BXA8/PgnJ m 78158.0 0.0   1   0.0 0.0 78158.0, 78158.0 -0.46
BXD11/TyJ m 108224.0 0.0   1   0.0 0.0 108224.0, 108224.0 1.2
BXD12/TyJ m 122442.0 0.0   1   0.0 0.0 122442.0, 122442.0 1.98
BXD13/TyJ m 64124.0 0.0   1   0.0 0.0 64124.0, 64124.0 -1.23
BXD14/TyJ m 65635.0 0.0   1   0.0 0.0 65635.0, 65635.0 -1.15
BXD15/TyJ m 68294.0 0.0   1   0.0 0.0 68294.0, 68294.0 -1.0
BXD18/TyJ m 78878.0 0.0   1   0.0 0.0 78878.0, 78878.0 -0.42
BXD19/TyJ m 74420.0 5060.0   2   3578.0 0.068 70842.0, 77998.0 -0.67
BXD1/TyJ m 72700.0 0.0   1   0.0 0.0 72700.0, 72700.0 -0.76
BXD20/TyJ m 69069.0 0.0   1   0.0 0.0 69069.0, 69069.0 -0.96
BXD21/TyJ m 64476.0 0.0   1   0.0 0.0 64476.0, 64476.0 -1.21
BXD22/TyJ m 70895.0 0.0   1   0.0 0.0 70895.0, 70895.0 -0.86
BXD24/TyJ m 86042.0 0.0   1   0.0 0.0 86042.0, 86042.0 -0.03
BXD24/TyJ-Cep290rd16/J m 80328.0 0.0   1   0.0 0.0 80328.0, 80328.0 -0.34
BXD28/TyJ m 72048.0 1987.0   2   1405.0 0.0276 70643.0, 73453.0 -0.8
BXD29-Tlr4lps-2J/J m 113796.0 0.0   1   0.0 0.0 113796.0, 113796.0 1.5
BXD2/TyJ m 68403.0 0.0   1   0.0 0.0 68403.0, 68403.0 -1.0
BXD32/TyJ m 82172.0 0.0   1   0.0 0.0 82172.0, 82172.0 -0.24
BXD33/TyJ m 74194.0 0.0   1   0.0 0.0 74194.0, 74194.0 -0.68
BXD34/TyJ m 124175.0 0.0   1   0.0 0.0 124175.0, 124175.0 2.08
BXD36/TyJ m 75442.0 0.0   1   0.0 0.0 75442.0, 75442.0 -0.61
BXD38/TyJ m 85328.0 0.0   1   0.0 0.0 85328.0, 85328.0 -0.07
BXD39/TyJ m 70476.0 0.0   1   0.0 0.0 70476.0, 70476.0 -0.88
BXD40/TyJ m 106757.0 0.0   1   0.0 0.0 106757.0, 106757.0 1.12
BXD42/TyJ m 73138.0 0.0   1   0.0 0.0 73138.0, 73138.0 -0.74
BXD5/TyJ m 73651.0 0.0   1   0.0 0.0 73651.0, 73651.0 -0.71
BXD6/TyJ m 67196.0 0.0   1   0.0 0.0 67196.0, 67196.0 -1.06
BXD8/TyJ m 81845.0 0.0   1   0.0 0.0 81845.0, 81845.0 -0.26
BXD9/TyJ m 73638.0 0.0   1   0.0 0.0 73638.0, 73638.0 -0.71
BXH10/TyJ m 104193.0 0.0   1   0.0 0.0 104193.0, 104193.0 0.98
BXH19/TyJ m 74497.0 0.0   1   0.0 0.0 74497.0, 74497.0 -0.66
BXH20/KccJ m 76970.0 0.0   1   0.0 0.0 76970.0, 76970.0 -0.53
BXH22/KccJ m 104551.0 0.0   1   0.0 0.0 104551.0, 104551.0 0.99
BXH2/TyJ m 77606.0 0.0   1   0.0 0.0 77606.0, 77606.0 -0.49
BXH4/TyJ m 77059.0 7545.0   2   5335.0 0.0979 71725.0, 82394.0 -0.52
BXH6/TyJ m 57956.0 0.0   1   0.0 0.0 57956.0, 57956.0 -1.57
BXH7/TyJ m 77216.0 0.0   1   0.0 0.0 77216.0, 77216.0 -0.51
BXH8/TyJ m 77722.0 0.0   1   0.0 0.0 77722.0, 77722.0 -0.48
BXH9/TyJ m 73301.0 0.0   1   0.0 0.0 73301.0, 73301.0 -0.73
C3H/HeJ m 83495.0 18350.0   2   12975.0 0.22 70519.0, 96470.0 -0.17
C57BL/6J m 100477.0 5288.0   5 2365.0 0.0526 92898.0, 107602.0 0.77
C57L/J m 97599.0 0.0   1   0.0 0.0 97599.0, 97599.0 0.61
C58/J m 63689.0 0.0   1   0.0 0.0 63689.0, 63689.0 -1.26
CAST/EiJ m 82810.0 0.0   1   0.0 0.0 82810.0, 82810.0 -0.2
CBA/J m 102297.0 0.0   1   0.0 0.0 102297.0, 102297.0 0.87
CE/J m 119167.0 0.0   1   0.0 0.0 119167.0, 119167.0 1.8
CXB11/HiAJ m 91131.0 9519.0   2   6731.0 0.104 84399.0, 97862.0 0.25
CXB12/HiAJ m 76826.0 6406.0   2   4530.0 0.0834 72297.0, 81356.0 -0.53
CXB13/HiAJ m 86200.0 21636.0   3 12491.0 0.251 66232.0, 109186.0 -0.02
CXB1/ByJ m 88456.0 23499.0   3 13567.0 0.266 74161.0, 115577.0 0.11
CXB2/ByJ m 99411.0 21970.0   3 12685.0 0.221 77666.0, 121600.0 0.71
CXB3/ByJ m 76409.0 3032.0   2   2144.0 0.0397 74265.0, 78553.0 -0.56
CXB4/ByJ m 63661.0 7350.0   2   5197.0 0.115 58464.0, 68858.0 -1.26
CXB6/ByJ m 99316.0 10970.0   3 6334.0 0.11 87973.0, 109871.0 0.71
CXB7/ByJ m 85204.0 12889.0   2   9114.0 0.151 76090.0, 94318.0 -0.07
CXB8/HiAJ m 74725.0 8091.0   3 4672.0 0.108 65626.0, 81114.0 -0.65
CXB9/HiAJ m 94791.0 3873.0   3 2236.0 0.0409 90697.0, 98398.0 0.46
DBA/2J m 89836.0 15485.0   4 7743.0 0.172 69193.0, 104546.0 0.18
FVB/NJ m 93672.0 0.0   1   0.0 0.0 93672.0, 93672.0 0.39
I/LnJ m 109514.0 0.0   1   0.0 0.0 109514.0, 109514.0 1.27
KK/HlJ m 96313.0 0.0   1   0.0 0.0 96313.0, 96313.0 0.54
LG/J m 89725.0 0.0   1   0.0 0.0 89725.0, 89725.0 0.18
LP/J m 70670.0 0.0   1   0.0 0.0 70670.0, 70670.0 -0.87
MA/MyJ m 113210.0 0.0   1   0.0 0.0 113210.0, 113210.0 1.47
NOD/ShiLtJ m 130492.0 0.0   1   0.0 0.0 130492.0, 130492.0 2.43
NON/ShiLtJ m 92564.0 0.0   1   0.0 0.0 92564.0, 92564.0 0.33
NZW/LacJ m 99342.0 0.0   1   0.0 0.0 99342.0, 99342.0 0.71
PL/J m 129267.0 0.0   1   0.0 0.0 129267.0, 129267.0 2.36
RIIIS/J m 93528.0 0.0   1   0.0 0.0 93528.0, 93528.0 0.39
SEA/GnJ m 104020.0 0.0   1   0.0 0.0 104020.0, 104020.0 0.97
SJL/J m 65760.0 0.0   1   0.0 0.0 65760.0, 65760.0 -1.14
SM/J m 132242.0 0.0   1   0.0 0.0 132242.0, 132242.0 2.52
SWR/J m 96876.0 0.0   1   0.0 0.0 96876.0, 96876.0 0.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 92265.35 9873.7223 112331.168 72199.532
AXB19b/PgnJ m 97064.25 9873.7223 117130.068 76998.432
AXB24/PgnJ m 58479.8 9873.7223 78545.618 38413.982
BALB/cJ m 90368.6 8061.8605 106752.2718 73984.9282
BXA16/PgnJ m 75908.0 9873.7223 95973.818 55842.182
BXD19/TyJ m 74420.1 9873.7223 94485.918 54354.282
BXD28/TyJ m 72048.2 9873.7223 92114.018 51982.382
BXH4/TyJ m 77059.45 9873.7223 97125.268 56993.632
C3H/HeJ m 83494.65 9873.7223 103560.468 63428.832
C57BL/6J m 100477.48 6244.6903 113168.2176 87786.7424
CXB11/HiAJ m 91130.6 9873.7223 111196.418 71064.782
CXB12/HiAJ m 76826.5 9873.7223 96892.318 56760.682
CXB13/HiAJ m 86200.3333 8061.8605 102584.0051 69816.6616
CXB1/ByJ m 88455.6667 8061.8605 104839.3384 72071.9949
CXB2/ByJ m 99411.1 8061.8605 115794.7718 83027.4282
CXB3/ByJ m 76408.9 9873.7223 96474.718 56343.082
CXB4/ByJ m 63660.65 9873.7223 83726.468 43594.832
CXB6/ByJ m 99315.5667 8061.8605 115699.2384 82931.8949
CXB7/ByJ m 85203.95 9873.7223 105269.768 65138.132
CXB8/HiAJ m 74724.7667 8061.8605 91108.4384 58341.0949
CXB9/HiAJ m 94791.1 8061.8605 111174.7718 78407.4282
DBA/2J m 89836.0 6981.776 104024.676 75647.324




  GWAS USING LINEAR MIXED MODELS

Loading data... this may take some time.