Project measure / variable:   HMDPpheno8   nonadecenoate

ID, description, units MPD:50366   nonadecenoate   liver 10-nonadecenoate (19:1n9) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means648434   None
Median of the strain means639716   None
SD of the strain means± 221067
Coefficient of variation (CV)0.341
Min–max range of strain means167381   –   1278097   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 2478913390149.01 118043494769.001 1.0098 0.4778
Residuals 34 3974595133390.2 116899856864.418


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 534629.0 0.0   1   0.0 0.0 534629.0, 534629.0 -0.51
A/J m 574758.0 169.0   2   119.0 0.000294 574639.0, 574878.0 -0.33
AKR/J m 341227.0 0.0   1   0.0 0.0 341227.0, 341227.0 -1.39
AXB10/PgnJ m 446989.0 0.0   1   0.0 0.0 446989.0, 446989.0 -0.91
AXB12/PgnJ m 818481.0 0.0   1   0.0 0.0 818481.0, 818481.0 0.77
AXB13/PgnJ m 546406.0 0.0   1   0.0 0.0 546406.0, 546406.0 -0.46
AXB15/PgnJ m 670578.0 0.0   1   0.0 0.0 670578.0, 670578.0 0.1
AXB19a/PgnJ m 648147.0 0.0   1   0.0 0.0 648147.0, 648147.0 0.0
AXB19b/PgnJ m 528331.0 47365.0   2   33492.0 0.0896 494839.0, 561823.0 -0.54
AXB19/PgnJ m 793472.0 0.0   1   0.0 0.0 793472.0, 793472.0 0.66
AXB1/PgnJ m 445614.0 0.0   1   0.0 0.0 445614.0, 445614.0 -0.92
AXB23/PgnJ m 730434.0 0.0   1   0.0 0.0 730434.0, 730434.0 0.37
AXB24/PgnJ m 767521.0 351506.0   2   248552.0 0.458 518970.0, 1016073.0 0.54
AXB2/PgnJ m 1278097.0 0.0   1   0.0 0.0 1278097.0, 1278097.0 2.85
AXB4/PgnJ m 729375.0 0.0   1   0.0 0.0 729375.0, 729375.0 0.37
AXB5/PgnJ m 805997.0 0.0   1   0.0 0.0 805997.0, 805997.0 0.71
AXB6/PgnJ m 845793.0 0.0   1   0.0 0.0 845793.0, 845793.0 0.89
AXB8/PgnJ m 570781.0 0.0   1   0.0 0.0 570781.0, 570781.0 -0.35
BALB/cJ m 632168.0 70229.0   3 40547.0 0.111 551159.0, 675872.0 -0.07
BTBR T+ Itpr3tf/J m 356658.0 0.0   1   0.0 0.0 356658.0, 356658.0 -1.32
BUB/BnJ m 713577.0 0.0   1   0.0 0.0 713577.0, 713577.0 0.29
BXA11/PgnJ m 656324.0 0.0   1   0.0 0.0 656324.0, 656324.0 0.04
BXA12/PgnJ m 814098.0 0.0   1   0.0 0.0 814098.0, 814098.0 0.75
BXA13/PgnJ m 539598.0 0.0   1   0.0 0.0 539598.0, 539598.0 -0.49
BXA14/PgnJ m 167381.0 0.0   1   0.0 0.0 167381.0, 167381.0 -2.18
BXA16/PgnJ m 590351.0 77257.0   2   54629.0 0.131 535722.0, 644980.0 -0.26
BXA1/PgnJ m 847833.0 0.0   1   0.0 0.0 847833.0, 847833.0 0.9
BXA24/PgnJ m 470592.0 0.0   1   0.0 0.0 470592.0, 470592.0 -0.8
BXA25/PgnJ m 828430.0 0.0   1   0.0 0.0 828430.0, 828430.0 0.81
BXA26/PgnJ m 1218500.0 0.0   1   0.0 0.0 1218500.0, 1218500.0 2.58
BXA2/PgnJ m 613561.0 0.0   1   0.0 0.0 613561.0, 613561.0 -0.16
BXA4/PgnJ m 793573.0 0.0   1   0.0 0.0 793573.0, 793573.0 0.66
BXA7/PgnJ m 633065.0 0.0   1   0.0 0.0 633065.0, 633065.0 -0.07
BXA8/PgnJ m 789967.0 0.0   1   0.0 0.0 789967.0, 789967.0 0.64
BXD11/TyJ m 460334.0 0.0   1   0.0 0.0 460334.0, 460334.0 -0.85
BXD12/TyJ m 789057.0 0.0   1   0.0 0.0 789057.0, 789057.0 0.64
BXD13/TyJ m 503942.0 0.0   1   0.0 0.0 503942.0, 503942.0 -0.65
BXD14/TyJ m 300015.0 0.0   1   0.0 0.0 300015.0, 300015.0 -1.58
BXD15/TyJ m 552286.0 0.0   1   0.0 0.0 552286.0, 552286.0 -0.43
BXD18/TyJ m 710768.0 0.0   1   0.0 0.0 710768.0, 710768.0 0.28
BXD19/TyJ m 519852.0 150472.0   2   106400.0 0.289 413452.0, 626252.0 -0.58
BXD1/TyJ m 709595.0 0.0   1   0.0 0.0 709595.0, 709595.0 0.28
BXD20/TyJ m 816540.0 0.0   1   0.0 0.0 816540.0, 816540.0 0.76
BXD21/TyJ m 660029.0 0.0   1   0.0 0.0 660029.0, 660029.0 0.05
BXD22/TyJ m 588016.0 0.0   1   0.0 0.0 588016.0, 588016.0 -0.27
BXD24/TyJ m 608185.0 0.0   1   0.0 0.0 608185.0, 608185.0 -0.18
BXD24/TyJ-Cep290rd16/J m 393431.0 0.0   1   0.0 0.0 393431.0, 393431.0 -1.15
BXD28/TyJ m 660493.0 155316.0   2   109825.0 0.235 550668.0, 770318.0 0.05
BXD29-Tlr4lps-2J/J m 638133.0 0.0   1   0.0 0.0 638133.0, 638133.0 -0.05
BXD2/TyJ m 590486.0 0.0   1   0.0 0.0 590486.0, 590486.0 -0.26
BXD32/TyJ m 989106.0 0.0   1   0.0 0.0 989106.0, 989106.0 1.54
BXD33/TyJ m 314464.0 0.0   1   0.0 0.0 314464.0, 314464.0 -1.51
BXD34/TyJ m 744051.0 0.0   1   0.0 0.0 744051.0, 744051.0 0.43
BXD36/TyJ m 582445.0 0.0   1   0.0 0.0 582445.0, 582445.0 -0.3
BXD38/TyJ m 926970.0 0.0   1   0.0 0.0 926970.0, 926970.0 1.26
BXD39/TyJ m 635159.0 0.0   1   0.0 0.0 635159.0, 635159.0 -0.06
BXD40/TyJ m 699383.0 0.0   1   0.0 0.0 699383.0, 699383.0 0.23
BXD42/TyJ m 552728.0 0.0   1   0.0 0.0 552728.0, 552728.0 -0.43
BXD5/TyJ m 741110.0 0.0   1   0.0 0.0 741110.0, 741110.0 0.42
BXD6/TyJ m 496657.0 0.0   1   0.0 0.0 496657.0, 496657.0 -0.69
BXD8/TyJ m 1029407.0 0.0   1   0.0 0.0 1029407.0, 1029407.0 1.72
BXD9/TyJ m 417042.0 0.0   1   0.0 0.0 417042.0, 417042.0 -1.05
BXH10/TyJ m 347496.0 0.0   1   0.0 0.0 347496.0, 347496.0 -1.36
BXH19/TyJ m 358678.0 0.0   1   0.0 0.0 358678.0, 358678.0 -1.31
BXH20/KccJ m 483367.0 0.0   1   0.0 0.0 483367.0, 483367.0 -0.75
BXH22/KccJ m 837635.0 0.0   1   0.0 0.0 837635.0, 837635.0 0.86
BXH2/TyJ m 528589.0 0.0   1   0.0 0.0 528589.0, 528589.0 -0.54
BXH4/TyJ m 395316.0 8084.0   2   5716.0 0.0204 389600.0, 401032.0 -1.14
BXH6/TyJ m 286796.0 0.0   1   0.0 0.0 286796.0, 286796.0 -1.64
BXH7/TyJ m 439808.0 0.0   1   0.0 0.0 439808.0, 439808.0 -0.94
BXH8/TyJ m 729011.0 0.0   1   0.0 0.0 729011.0, 729011.0 0.36
BXH9/TyJ m 635297.0 0.0   1   0.0 0.0 635297.0, 635297.0 -0.06
C3H/HeJ m 487003.0 281332.0   2   198932.0 0.578 288071.0, 685936.0 -0.73
C57BL/6J m 821871.0 148527.0   5 66423.0 0.181 629956.0, 1021478.0 0.78
C57L/J m 1145208.0 0.0   1   0.0 0.0 1145208.0, 1145208.0 2.25
C58/J m 320728.0 0.0   1   0.0 0.0 320728.0, 320728.0 -1.48
CAST/EiJ m 182019.0 0.0   1   0.0 0.0 182019.0, 182019.0 -2.11
CBA/J m 773523.0 0.0   1   0.0 0.0 773523.0, 773523.0 0.57
CE/J m 648290.0 0.0   1   0.0 0.0 648290.0, 648290.0 0.0
CXB11/HiAJ m 616973.0 195361.0   2   138141.0 0.317 478832.0, 755114.0 -0.14
CXB12/HiAJ m 1002838.0 250155.0   2   176887.0 0.249 825952.0, 1179725.0 1.6
CXB13/HiAJ m 720076.0 174359.0   3 100666.0 0.242 535709.0, 882314.0 0.32
CXB1/ByJ m 672166.0 272102.0   3 157098.0 0.405 359506.0, 855377.0 0.11
CXB2/ByJ m 1164458.0 535842.0   3 309368.0 0.46 833124.0, 1782662.0 2.33
CXB3/ByJ m 716805.0 177512.0   2   125520.0 0.248 591285.0, 842325.0 0.31
CXB4/ByJ m 533054.0 220915.0   2   156210.0 0.414 376844.0, 689265.0 -0.52
CXB6/ByJ m 559261.0 220639.0   3 127386.0 0.395 375994.0, 804163.0 -0.4
CXB7/ByJ m 648417.0 12196.0   2   8624.0 0.0188 639793.0, 657041.0 0.0
CXB8/HiAJ m 840526.0 342480.0   3 197731.0 0.407 618437.0, 1234943.0 0.87
CXB9/HiAJ m 1254756.0 1034263.0   3 597132.0 0.824 540846.0, 2440836.0 2.74
DBA/2J m 688231.0 247020.0   4 123510.0 0.359 420743.0, 958874.0 0.18
FVB/NJ m 629646.0 0.0   1   0.0 0.0 629646.0, 629646.0 -0.08
I/LnJ m 524614.0 0.0   1   0.0 0.0 524614.0, 524614.0 -0.56
KK/HlJ m 1002627.0 0.0   1   0.0 0.0 1002627.0, 1002627.0 1.6
LG/J m 261338.0 0.0   1   0.0 0.0 261338.0, 261338.0 -1.75
LP/J m 445190.0 0.0   1   0.0 0.0 445190.0, 445190.0 -0.92
MA/MyJ m 1015658.0 0.0   1   0.0 0.0 1015658.0, 1015658.0 1.66
NOD/ShiLtJ m 641300.0 0.0   1   0.0 0.0 641300.0, 641300.0 -0.03
NON/ShiLtJ m 302993.0 0.0   1   0.0 0.0 302993.0, 302993.0 -1.56
NZW/LacJ m 736725.0 0.0   1   0.0 0.0 736725.0, 736725.0 0.4
PL/J m 646487.0 0.0   1   0.0 0.0 646487.0, 646487.0 -0.01
RIIIS/J m 569509.0 0.0   1   0.0 0.0 569509.0, 569509.0 -0.36
SEA/GnJ m 652745.0 0.0   1   0.0 0.0 652745.0, 652745.0 0.02
SJL/J m 543034.0 0.0   1   0.0 0.0 543034.0, 543034.0 -0.48
SM/J m 667579.0 0.0   1   0.0 0.0 667579.0, 667579.0 0.09
SWR/J m 884338.0 0.0   1   0.0 0.0 884338.0, 884338.0 1.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 574758.5 241764.2001 1066082.4681 83434.5319
AXB19b/PgnJ m 528331.4 241764.2001 1019655.3681 37007.4319
AXB24/PgnJ m 767521.45 241764.2001 1258845.4181 276197.4819
BALB/cJ m 632168.4 197399.6427 1033332.7401 231004.0599
BXA16/PgnJ m 590350.75 241764.2001 1081674.7181 99026.7819
BXD19/TyJ m 519851.6 241764.2001 1011175.5681 28527.6319
BXD28/TyJ m 660493.15 241764.2001 1151817.1181 169169.1819
BXH4/TyJ m 395316.0 241764.2001 886639.9681 0.0
C3H/HeJ m 487003.4 241764.2001 978327.3681 0.0
C57BL/6J m 821871.08 152905.1058 1132611.6417 511130.5183
CXB11/HiAJ m 616972.7 241764.2001 1108296.6681 125648.7319
CXB12/HiAJ m 1002838.45 241764.2001 1494162.4181 511514.4819
CXB13/HiAJ m 720076.4 197399.6427 1121240.7401 318912.0599
CXB1/ByJ m 672166.0 197399.6427 1073330.3401 271001.6599
CXB2/ByJ m 1164458.2 197399.6427 1565622.5401 763293.8599
CXB3/ByJ m 716804.95 241764.2001 1208128.9181 225480.9819
CXB4/ByJ m 533054.45 241764.2001 1024378.4181 41730.4819
CXB6/ByJ m 559260.9667 197399.6427 960425.3068 158096.6266
CXB7/ByJ m 648417.05 241764.2001 1139741.0181 157093.0819
CXB8/HiAJ m 840525.8 197399.6427 1241690.1401 439361.4599
CXB9/HiAJ m 1254755.7 197399.6427 1655920.0401 853591.3599
DBA/2J m 688231.225 170953.1053 1035649.7346 340812.7154




  GWAS USING LINEAR MIXED MODELS

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