Phenotype measure:   HMDPpheno8   linoleate

ID, description, units MPD:50361   linoleate   liver linoleate (18:2n6) (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver linoleate (18:2n6) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means45442998   None
Median of the strain means46503978   None
SD of the strain means± 9384879
Coefficient of variation (CV)0.207
Min–max range of strain means18036744   –   69223059   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 3421809375806480.0 162943303609833.0 1.9397 0.0416
Residuals 34 2856212448418570.0 84006248482899.2


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 54638904.0 0.0   1   0.0 0.0 54638904.0, 54638904.0 0.98
A/J m 40167366.0 5633551.0   2   3983522.0 0.14 36183844.0, 44150888.0 -0.56
AKR/J m 48718320.0 0.0   1   0.0 0.0 48718320.0, 48718320.0 0.35
AXB10/PgnJ m 44465180.0 0.0   1   0.0 0.0 44465180.0, 44465180.0 -0.1
AXB12/PgnJ m 48091184.0 0.0   1   0.0 0.0 48091184.0, 48091184.0 0.28
AXB13/PgnJ m 43751280.0 0.0   1   0.0 0.0 43751280.0, 43751280.0 -0.18
AXB15/PgnJ m 49341224.0 0.0   1   0.0 0.0 49341224.0, 49341224.0 0.42
AXB19a/PgnJ m 37676224.0 0.0   1   0.0 0.0 37676224.0, 37676224.0 -0.83
AXB19b/PgnJ m 29705851.0 7531175.0   2   5325345.0 0.254 24380506.0, 35031196.0 -1.68
AXB19/PgnJ m 45998752.0 0.0   1   0.0 0.0 45998752.0, 45998752.0 0.06
AXB1/PgnJ m 29171822.0 0.0   1   0.0 0.0 29171822.0, 29171822.0 -1.73
AXB23/PgnJ m 54991592.0 0.0   1   0.0 0.0 54991592.0, 54991592.0 1.02
AXB24/PgnJ m 49049762.0 4437460.0   2   3137758.0 0.0905 45912004.0, 52187520.0 0.38
AXB2/PgnJ m 51015868.0 0.0   1   0.0 0.0 51015868.0, 51015868.0 0.59
AXB4/PgnJ m 35478704.0 0.0   1   0.0 0.0 35478704.0, 35478704.0 -1.06
AXB5/PgnJ m 51607036.0 0.0   1   0.0 0.0 51607036.0, 51607036.0 0.66
AXB6/PgnJ m 46491944.0 0.0   1   0.0 0.0 46491944.0, 46491944.0 0.11
AXB8/PgnJ m 44272240.0 0.0   1   0.0 0.0 44272240.0, 44272240.0 -0.12
BALB/cJ m 44333372.0 1845665.0   3 1065595.0 0.0416 42220676.0, 45632344.0 -0.12
BTBR T+ Itpr3tf/J m 33957896.0 0.0   1   0.0 0.0 33957896.0, 33957896.0 -1.22
BUB/BnJ m 59520224.0 0.0   1   0.0 0.0 59520224.0, 59520224.0 1.5
BXA11/PgnJ m 60603388.0 0.0   1   0.0 0.0 60603388.0, 60603388.0 1.62
BXA12/PgnJ m 51114212.0 0.0   1   0.0 0.0 51114212.0, 51114212.0 0.6
BXA13/PgnJ m 34247076.0 0.0   1   0.0 0.0 34247076.0, 34247076.0 -1.19
BXA14/PgnJ m 18036744.0 0.0   1   0.0 0.0 18036744.0, 18036744.0 -2.92
BXA16/PgnJ m 41998358.0 7281641.0   2   5148898.0 0.173 36849460.0, 47147256.0 -0.37
BXA1/PgnJ m 56163480.0 0.0   1   0.0 0.0 56163480.0, 56163480.0 1.14
BXA24/PgnJ m 37834204.0 0.0   1   0.0 0.0 37834204.0, 37834204.0 -0.81
BXA25/PgnJ m 49477500.0 0.0   1   0.0 0.0 49477500.0, 49477500.0 0.43
BXA26/PgnJ m 57156528.0 0.0   1   0.0 0.0 57156528.0, 57156528.0 1.25
BXA2/PgnJ m 48408216.0 0.0   1   0.0 0.0 48408216.0, 48408216.0 0.32
BXA4/PgnJ m 37859696.0 0.0   1   0.0 0.0 37859696.0, 37859696.0 -0.81
BXA7/PgnJ m 43730668.0 0.0   1   0.0 0.0 43730668.0, 43730668.0 -0.18
BXA8/PgnJ m 48503428.0 0.0   1   0.0 0.0 48503428.0, 48503428.0 0.33
BXD11/TyJ m 44371688.0 0.0   1   0.0 0.0 44371688.0, 44371688.0 -0.11
BXD12/TyJ m 46479684.0 0.0   1   0.0 0.0 46479684.0, 46479684.0 0.11
BXD13/TyJ m 49161188.0 0.0   1   0.0 0.0 49161188.0, 49161188.0 0.4
BXD14/TyJ m 36330332.0 0.0   1   0.0 0.0 36330332.0, 36330332.0 -0.97
BXD15/TyJ m 56246536.0 0.0   1   0.0 0.0 56246536.0, 56246536.0 1.15
BXD18/TyJ m 52469016.0 0.0   1   0.0 0.0 52469016.0, 52469016.0 0.75
BXD19/TyJ m 51510348.0 6391804.0   2   4519688.0 0.124 46990660.0, 56030036.0 0.65
BXD1/TyJ m 45277200.0 0.0   1   0.0 0.0 45277200.0, 45277200.0 -0.02
BXD20/TyJ m 37254412.0 0.0   1   0.0 0.0 37254412.0, 37254412.0 -0.87
BXD21/TyJ m 46416688.0 0.0   1   0.0 0.0 46416688.0, 46416688.0 0.1
BXD22/TyJ m 41521468.0 0.0   1   0.0 0.0 41521468.0, 41521468.0 -0.42
BXD24/TyJ m 47070480.0 0.0   1   0.0 0.0 47070480.0, 47070480.0 0.17
BXD24/TyJ-Cep290rd16/J m 40194116.0 0.0   1   0.0 0.0 40194116.0, 40194116.0 -0.56
BXD28/TyJ m 51218642.0 541375.0   2   382810.0 0.0106 50835832.0, 51601452.0 0.62
BXD29-Tlr4lps-2J/J m 41335136.0 0.0   1   0.0 0.0 41335136.0, 41335136.0 -0.44
BXD2/TyJ m 46855588.0 0.0   1   0.0 0.0 46855588.0, 46855588.0 0.15
BXD32/TyJ m 67493288.0 0.0   1   0.0 0.0 67493288.0, 67493288.0 2.35
BXD33/TyJ m 28221652.0 0.0   1   0.0 0.0 28221652.0, 28221652.0 -1.84
BXD34/TyJ m 48152900.0 0.0   1   0.0 0.0 48152900.0, 48152900.0 0.29
BXD36/TyJ m 47532436.0 0.0   1   0.0 0.0 47532436.0, 47532436.0 0.22
BXD38/TyJ m 52551616.0 0.0   1   0.0 0.0 52551616.0, 52551616.0 0.76
BXD39/TyJ m 39803000.0 0.0   1   0.0 0.0 39803000.0, 39803000.0 -0.6
BXD40/TyJ m 55421752.0 0.0   1   0.0 0.0 55421752.0, 55421752.0 1.06
BXD42/TyJ m 43739620.0 0.0   1   0.0 0.0 43739620.0, 43739620.0 -0.18
BXD5/TyJ m 41583628.0 0.0   1   0.0 0.0 41583628.0, 41583628.0 -0.41
BXD6/TyJ m 43587268.0 0.0   1   0.0 0.0 43587268.0, 43587268.0 -0.2
BXD8/TyJ m 58901232.0 0.0   1   0.0 0.0 58901232.0, 58901232.0 1.43
BXD9/TyJ m 47569188.0 0.0   1   0.0 0.0 47569188.0, 47569188.0 0.23
BXH10/TyJ m 34469836.0 0.0   1   0.0 0.0 34469836.0, 34469836.0 -1.17
BXH19/TyJ m 28176010.0 0.0   1   0.0 0.0 28176010.0, 28176010.0 -1.84
BXH20/KccJ m 47205552.0 0.0   1   0.0 0.0 47205552.0, 47205552.0 0.19
BXH22/KccJ m 50442604.0 0.0   1   0.0 0.0 50442604.0, 50442604.0 0.53
BXH2/TyJ m 39085060.0 0.0   1   0.0 0.0 39085060.0, 39085060.0 -0.68
BXH4/TyJ m 40283604.0 819712.0   2   579624.0 0.0203 39703980.0, 40863228.0 -0.55
BXH6/TyJ m 33110964.0 0.0   1   0.0 0.0 33110964.0, 33110964.0 -1.31
BXH7/TyJ m 34868272.0 0.0   1   0.0 0.0 34868272.0, 34868272.0 -1.13
BXH8/TyJ m 37524580.0 0.0   1   0.0 0.0 37524580.0, 37524580.0 -0.84
BXH9/TyJ m 52693376.0 0.0   1   0.0 0.0 52693376.0, 52693376.0 0.77
C3H/HeJ m 38809426.0 16660010.0   2   11780406.0 0.429 27029020.0, 50589832.0 -0.71
C57BL/6J m 53910009.0 9108000.0   5 4073221.0 0.169 40156912.0, 65548228.0 0.9
C57L/J m 61602664.0 0.0   1   0.0 0.0 61602664.0, 61602664.0 1.72
C58/J m 19053744.0 0.0   1   0.0 0.0 19053744.0, 19053744.0 -2.81
CAST/EiJ m 23848852.0 0.0   1   0.0 0.0 23848852.0, 23848852.0 -2.3
CBA/J m 48936664.0 0.0   1   0.0 0.0 48936664.0, 48936664.0 0.37
CE/J m 44582000.0 0.0   1   0.0 0.0 44582000.0, 44582000.0 -0.09
CXB11/HiAJ m 46606670.0 8188192.0   2   5789926.0 0.176 40816744.0, 52396596.0 0.12
CXB12/HiAJ m 59002442.0 4233536.0   2   2993562.0 0.0718 56008880.0, 61996004.0 1.44
CXB13/HiAJ m 51095911.0 15452886.0   3 8921728.0 0.302 34297212.0, 64705296.0 0.6
CXB1/ByJ m 45866726.0 12082695.0   3 6975947.0 0.263 32616878.0, 56276180.0 0.05
CXB2/ByJ m 57670037.0 2424891.0   3 1400012.0 0.042 55113640.0, 59937540.0 1.3
CXB3/ByJ m 48653422.0 2460084.0   2   1739542.0 0.0506 46913880.0, 50392964.0 0.34
CXB4/ByJ m 48096674.0 728628.0   2   515218.0 0.0151 47581456.0, 48611892.0 0.28
CXB6/ByJ m 42877467.0 5850908.0   3 3378023.0 0.136 37721516.0, 49236348.0 -0.27
CXB7/ByJ m 47611898.0 1369505.0   2   968386.0 0.0288 46643512.0, 48580284.0 0.23
CXB8/HiAJ m 45700929.0 10433916.0   3 6024024.0 0.228 36705928.0, 57139904.0 0.03
CXB9/HiAJ m 69223059.0 18972615.0   3 10953844.0 0.274 55628096.0, 90898136.0 2.53
DBA/2J m 50004169.0 7214750.0   4 3607375.0 0.144 40554308.0, 56662652.0 0.49
FVB/NJ m 38015736.0 0.0   1   0.0 0.0 38015736.0, 38015736.0 -0.79
I/LnJ m 29368186.0 0.0   1   0.0 0.0 29368186.0, 29368186.0 -1.71
KK/HlJ m 46516012.0 0.0   1   0.0 0.0 46516012.0, 46516012.0 0.11
LG/J m 31017182.0 0.0   1   0.0 0.0 31017182.0, 31017182.0 -1.54
LP/J m 34298192.0 0.0   1   0.0 0.0 34298192.0, 34298192.0 -1.19
MA/MyJ m 52342708.0 0.0   1   0.0 0.0 52342708.0, 52342708.0 0.74
NOD/ShiLtJ m 57002088.0 0.0   1   0.0 0.0 57002088.0, 57002088.0 1.23
NON/ShiLtJ m 43486228.0 0.0   1   0.0 0.0 43486228.0, 43486228.0 -0.21
NZW/LacJ m 48193072.0 0.0   1   0.0 0.0 48193072.0, 48193072.0 0.29
PL/J m 52214668.0 0.0   1   0.0 0.0 52214668.0, 52214668.0 0.72
RIIIS/J m 58224832.0 0.0   1   0.0 0.0 58224832.0, 58224832.0 1.36
SEA/GnJ m 51764424.0 0.0   1   0.0 0.0 51764424.0, 51764424.0 0.67
SJL/J m 39097424.0 0.0   1   0.0 0.0 39097424.0, 39097424.0 -0.68
SM/J m 41295744.0 0.0   1   0.0 0.0 41295744.0, 41295744.0 -0.44
SWR/J m 57260336.0 0.0   1   0.0 0.0 57260336.0, 57260336.0 1.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 40167366.0 6480981.7344 53338305.5447 26996426.4553
AXB19b/PgnJ m 29705851.0 6480981.7344 42876790.5447 16534911.4553
AXB24/PgnJ m 49049762.0 6480981.7344 62220701.5447 35878822.4553
BALB/cJ m 44333372.0 5291699.4272 55087399.1058 33579344.8942
BXA16/PgnJ m 41998358.0 6480981.7344 55169297.5447 28827418.4553
BXD19/TyJ m 51510348.0 6480981.7344 64681287.5447 38339408.4553
BXD28/TyJ m 51218642.0 6480981.7344 64389581.5447 38047702.4553
BXH4/TyJ m 40283604.0 6480981.7344 53454543.5447 27112664.4553
C3H/HeJ m 38809426.0 6480981.7344 51980365.5447 25638486.4553
C57BL/6J m 53910008.8 4098932.7509 62240042.3771 45579975.2229
CXB11/HiAJ m 46606670.0 6480981.7344 59777609.5447 33435730.4553
CXB12/HiAJ m 59002442.0 6480981.7344 72173381.5447 45831502.4553
CXB13/HiAJ m 51095910.6667 5291699.4272 61849937.7725 40341883.5608
CXB1/ByJ m 45866726.0 5291699.4272 56620753.1058 35112698.8942
CXB2/ByJ m 57670037.3333 5291699.4272 68424064.4392 46916010.2275
CXB3/ByJ m 48653422.0 6480981.7344 61824361.5447 35482482.4553
CXB4/ByJ m 48096674.0 6480981.7344 61267613.5447 34925734.4553
CXB6/ByJ m 42877466.6667 5291699.4272 53631493.7725 32123439.5608
CXB7/ByJ m 47611898.0 6480981.7344 60782837.5447 34440958.4553
CXB8/HiAJ m 45700929.3333 5291699.4272 56454956.4392 34946902.2275
CXB9/HiAJ m 69223058.6667 5291699.4272 79977085.7725 58469031.5608
DBA/2J m 50004169.0 4582746.1331 59317429.6667 40690908.3333




  GWAS USING LINEAR MIXED MODELS