Phenotype measure:   HMDPpheno8   eicosenoate

ID, description, units MPD:50359   eicosenoate   liver eicosenoate (20:1n9 or 11) (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver eicosenoate (20:1n9 or 11) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means3126408   None
Median of the strain means2855891   None
SD of the strain means± 1349078
Coefficient of variation (CV)0.432
Min–max range of strain means1078102   –   9552245   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 102143650775402.0 4863983370257.25 1.2327 0.2867
Residuals 34 134154503797334.0 3945720699921.58


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 3229122.0 0.0   1   0.0 0.0 3229122.0, 3229122.0 0.08
A/J m 1645039.0 631729.0   2   446700.0 0.384 1198339.0, 2091739.0 -1.1
AKR/J m 1732870.0 0.0   1   0.0 0.0 1732870.0, 1732870.0 -1.03
AXB10/PgnJ m 2165440.0 0.0   1   0.0 0.0 2165440.0, 2165440.0 -0.71
AXB12/PgnJ m 2704238.0 0.0   1   0.0 0.0 2704238.0, 2704238.0 -0.31
AXB13/PgnJ m 1680629.0 0.0   1   0.0 0.0 1680629.0, 1680629.0 -1.07
AXB15/PgnJ m 2656942.0 0.0   1   0.0 0.0 2656942.0, 2656942.0 -0.35
AXB19a/PgnJ m 2787680.0 0.0   1   0.0 0.0 2787680.0, 2787680.0 -0.25
AXB19b/PgnJ m 3291848.0 412150.0   2   291434.0 0.125 3000414.0, 3583282.0 0.12
AXB19/PgnJ m 4118066.0 0.0   1   0.0 0.0 4118066.0, 4118066.0 0.74
AXB1/PgnJ m 3100264.0 0.0   1   0.0 0.0 3100264.0, 3100264.0 -0.02
AXB23/PgnJ m 3431986.0 0.0   1   0.0 0.0 3431986.0, 3431986.0 0.23
AXB24/PgnJ m 4345145.0 2778837.0   2   1964935.0 0.64 2380210.0, 6310080.0 0.9
AXB2/PgnJ m 5807012.0 0.0   1   0.0 0.0 5807012.0, 5807012.0 1.99
AXB4/PgnJ m 3284570.0 0.0   1   0.0 0.0 3284570.0, 3284570.0 0.12
AXB5/PgnJ m 2535468.0 0.0   1   0.0 0.0 2535468.0, 2535468.0 -0.44
AXB6/PgnJ m 4430768.0 0.0   1   0.0 0.0 4430768.0, 4430768.0 0.97
AXB8/PgnJ m 2663888.0 0.0   1   0.0 0.0 2663888.0, 2663888.0 -0.34
BALB/cJ m 3631940.0 1073991.0   3 620069.0 0.296 2571424.0, 4718917.0 0.37
BTBR T+ Itpr3tf/J m 1210442.0 0.0   1   0.0 0.0 1210442.0, 1210442.0 -1.42
BUB/BnJ m 3837509.0 0.0   1   0.0 0.0 3837509.0, 3837509.0 0.53
BXA11/PgnJ m 3046050.0 0.0   1   0.0 0.0 3046050.0, 3046050.0 -0.06
BXA12/PgnJ m 4781701.0 0.0   1   0.0 0.0 4781701.0, 4781701.0 1.23
BXA13/PgnJ m 2528002.0 0.0   1   0.0 0.0 2528002.0, 2528002.0 -0.44
BXA14/PgnJ m 1134425.0 0.0   1   0.0 0.0 1134425.0, 1134425.0 -1.48
BXA16/PgnJ m 2787050.0 497316.0   2   351655.0 0.178 2435394.0, 3138705.0 -0.25
BXA1/PgnJ m 4490630.0 0.0   1   0.0 0.0 4490630.0, 4490630.0 1.01
BXA24/PgnJ m 2591330.0 0.0   1   0.0 0.0 2591330.0, 2591330.0 -0.4
BXA25/PgnJ m 4895121.0 0.0   1   0.0 0.0 4895121.0, 4895121.0 1.31
BXA26/PgnJ m 5569344.0 0.0   1   0.0 0.0 5569344.0, 5569344.0 1.81
BXA2/PgnJ m 2759091.0 0.0   1   0.0 0.0 2759091.0, 2759091.0 -0.27
BXA4/PgnJ m 3720364.0 0.0   1   0.0 0.0 3720364.0, 3720364.0 0.44
BXA7/PgnJ m 2317762.0 0.0   1   0.0 0.0 2317762.0, 2317762.0 -0.6
BXA8/PgnJ m 3571174.0 0.0   1   0.0 0.0 3571174.0, 3571174.0 0.33
BXD11/TyJ m 2053848.0 0.0   1   0.0 0.0 2053848.0, 2053848.0 -0.8
BXD12/TyJ m 3038147.0 0.0   1   0.0 0.0 3038147.0, 3038147.0 -0.07
BXD13/TyJ m 2220448.0 0.0   1   0.0 0.0 2220448.0, 2220448.0 -0.67
BXD14/TyJ m 1857811.0 0.0   1   0.0 0.0 1857811.0, 1857811.0 -0.94
BXD15/TyJ m 1919514.0 0.0   1   0.0 0.0 1919514.0, 1919514.0 -0.89
BXD18/TyJ m 2922851.0 0.0   1   0.0 0.0 2922851.0, 2922851.0 -0.15
BXD19/TyJ m 2532766.0 263082.0   2   186027.0 0.104 2346740.0, 2718794.0 -0.44
BXD1/TyJ m 2357851.0 0.0   1   0.0 0.0 2357851.0, 2357851.0 -0.57
BXD20/TyJ m 2985432.0 0.0   1   0.0 0.0 2985432.0, 2985432.0 -0.1
BXD21/TyJ m 3149030.0 0.0   1   0.0 0.0 3149030.0, 3149030.0 0.02
BXD22/TyJ m 2288731.0 0.0   1   0.0 0.0 2288731.0, 2288731.0 -0.62
BXD24/TyJ m 2536578.0 0.0   1   0.0 0.0 2536578.0, 2536578.0 -0.44
BXD24/TyJ-Cep290rd16/J m 1700368.0 0.0   1   0.0 0.0 1700368.0, 1700368.0 -1.06
BXD28/TyJ m 2883696.0 415157.0   2   293560.0 0.144 2590136.0, 3177256.0 -0.18
BXD29-Tlr4lps-2J/J m 3165819.0 0.0   1   0.0 0.0 3165819.0, 3165819.0 0.03
BXD2/TyJ m 3098764.0 0.0   1   0.0 0.0 3098764.0, 3098764.0 -0.02
BXD32/TyJ m 4637111.0 0.0   1   0.0 0.0 4637111.0, 4637111.0 1.12
BXD33/TyJ m 1385304.0 0.0   1   0.0 0.0 1385304.0, 1385304.0 -1.29
BXD34/TyJ m 3083783.0 0.0   1   0.0 0.0 3083783.0, 3083783.0 -0.03
BXD36/TyJ m 2359709.0 0.0   1   0.0 0.0 2359709.0, 2359709.0 -0.57
BXD38/TyJ m 3208353.0 0.0   1   0.0 0.0 3208353.0, 3208353.0 0.06
BXD39/TyJ m 4544318.0 0.0   1   0.0 0.0 4544318.0, 4544318.0 1.05
BXD40/TyJ m 2851702.0 0.0   1   0.0 0.0 2851702.0, 2851702.0 -0.2
BXD42/TyJ m 2073745.0 0.0   1   0.0 0.0 2073745.0, 2073745.0 -0.78
BXD5/TyJ m 3482636.0 0.0   1   0.0 0.0 3482636.0, 3482636.0 0.26
BXD6/TyJ m 2431598.0 0.0   1   0.0 0.0 2431598.0, 2431598.0 -0.52
BXD8/TyJ m 4065297.0 0.0   1   0.0 0.0 4065297.0, 4065297.0 0.7
BXD9/TyJ m 2160347.0 0.0   1   0.0 0.0 2160347.0, 2160347.0 -0.72
BXH10/TyJ m 1987984.0 0.0   1   0.0 0.0 1987984.0, 1987984.0 -0.84
BXH19/TyJ m 1843247.0 0.0   1   0.0 0.0 1843247.0, 1843247.0 -0.95
BXH20/KccJ m 2134131.0 0.0   1   0.0 0.0 2134131.0, 2134131.0 -0.74
BXH22/KccJ m 3530994.0 0.0   1   0.0 0.0 3530994.0, 3530994.0 0.3
BXH2/TyJ m 2494961.0 0.0   1   0.0 0.0 2494961.0, 2494961.0 -0.47
BXH4/TyJ m 2078536.0 88385.0   2   62498.0 0.0425 2016038.0, 2141034.0 -0.78
BXH6/TyJ m 1695049.0 0.0   1   0.0 0.0 1695049.0, 1695049.0 -1.06
BXH7/TyJ m 1783752.0 0.0   1   0.0 0.0 1783752.0, 1783752.0 -1.0
BXH8/TyJ m 1997651.0 0.0   1   0.0 0.0 1997651.0, 1997651.0 -0.84
BXH9/TyJ m 2748603.0 0.0   1   0.0 0.0 2748603.0, 2748603.0 -0.28
C3H/HeJ m 2633641.0 1225214.0   2   866357.0 0.465 1767283.0, 3499998.0 -0.37
C57BL/6J m 3715837.0 479505.0   5 214441.0 0.129 3169049.0, 4467312.0 0.44
C57L/J m 7255248.0 0.0   1   0.0 0.0 7255248.0, 7255248.0 3.06
C58/J m 3335204.0 0.0   1   0.0 0.0 3335204.0, 3335204.0 0.15
CAST/EiJ m 1078102.0 0.0   1   0.0 0.0 1078102.0, 1078102.0 -1.52
CBA/J m 3442191.0 0.0   1   0.0 0.0 3442191.0, 3442191.0 0.23
CE/J m 2918378.0 0.0   1   0.0 0.0 2918378.0, 2918378.0 -0.15
CXB11/HiAJ m 2860080.0 1022608.0   2   723093.0 0.358 2136986.0, 3583173.0 -0.2
CXB12/HiAJ m 4673337.0 1027646.0   2   726655.0 0.22 3946682.0, 5399992.0 1.15
CXB13/HiAJ m 3897699.0 1192146.0   3 688286.0 0.306 2558308.0, 4842599.0 0.57
CXB1/ByJ m 4760962.0 2238506.0   3 1292402.0 0.47 2196115.0, 6321019.0 1.21
CXB2/ByJ m 5618646.0 1811209.0   3 1045702.0 0.322 4538129.0, 7709660.0 1.85
CXB3/ByJ m 4145032.0 1135204.0   2   802711.0 0.274 3342321.0, 4947742.0 0.76
CXB4/ByJ m 2730675.0 688817.0   2   487067.0 0.252 2243608.0, 3217742.0 -0.29
CXB6/ByJ m 3727653.0 1921836.0   3 1109572.0 0.516 2163479.0, 5872998.0 0.45
CXB7/ByJ m 3658088.0 789076.0   2   557961.0 0.216 3100127.0, 4216048.0 0.39
CXB8/HiAJ m 4967968.0 1096403.0   3 633008.0 0.221 4108344.0, 6202692.0 1.37
CXB9/HiAJ m 7832669.0 6499957.0   3 3752752.0 0.83 3642388.0, 15320453.0 3.49
DBA/2J m 2731692.0 901180.0   4 450590.0 0.33 1655352.0, 3539044.0 -0.29
FVB/NJ m 4000788.0 0.0   1   0.0 0.0 4000788.0, 4000788.0 0.65
I/LnJ m 2525550.0 0.0   1   0.0 0.0 2525550.0, 2525550.0 -0.45
KK/HlJ m 9552245.0 0.0   1   0.0 0.0 9552245.0, 9552245.0 4.76
LG/J m 1303638.0 0.0   1   0.0 0.0 1303638.0, 1303638.0 -1.35
LP/J m 2189282.0 0.0   1   0.0 0.0 2189282.0, 2189282.0 -0.69
MA/MyJ m 2722801.0 0.0   1   0.0 0.0 2722801.0, 2722801.0 -0.3
NOD/ShiLtJ m 2111871.0 0.0   1   0.0 0.0 2111871.0, 2111871.0 -0.75
NON/ShiLtJ m 1263426.0 0.0   1   0.0 0.0 1263426.0, 1263426.0 -1.38
NZW/LacJ m 2553558.0 0.0   1   0.0 0.0 2553558.0, 2553558.0 -0.42
PL/J m 3227732.0 0.0   1   0.0 0.0 3227732.0, 3227732.0 0.08
RIIIS/J m 2581877.0 0.0   1   0.0 0.0 2581877.0, 2581877.0 -0.4
SEA/GnJ m 2984070.0 0.0   1   0.0 0.0 2984070.0, 2984070.0 -0.11
SJL/J m 2500657.0 0.0   1   0.0 0.0 2500657.0, 2500657.0 -0.46
SM/J m 4017748.0 0.0   1   0.0 0.0 4017748.0, 4017748.0 0.66
SWR/J m 4107482.0 0.0   1   0.0 0.0 4107482.0, 4107482.0 0.73


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 1645038.9 1404585.4726 4499500.0146 0.0
AXB19b/PgnJ m 3291847.5 1404585.4726 6146308.6146 437386.3854
AXB24/PgnJ m 4345144.75 1404585.4726 7199605.8646 1490683.6354
BALB/cJ m 3631939.9333 1146839.236 5962597.6738 1301282.1928
BXA16/PgnJ m 2787049.65 1404585.4726 5641510.7646 0.0
BXD19/TyJ m 2532766.5 1404585.4726 5387227.6146 0.0
BXD28/TyJ m 2883695.65 1404585.4726 5738156.7646 29234.5354
BXH4/TyJ m 2078535.7 1404585.4726 4932996.8146 0.0
C3H/HeJ m 2633640.55 1404585.4726 5488101.6646 0.0
C57BL/6J m 3715836.92 888337.8524 5521156.6429 1910517.1971
CXB11/HiAJ m 2860079.65 1404585.4726 5714540.7646 5618.5354
CXB12/HiAJ m 4673337.25 1404585.4726 7527798.3646 1818876.1354
CXB13/HiAJ m 3897699.0 1146839.236 6228356.7405 1567041.2595
CXB1/ByJ m 4760962.1 1146839.236 7091619.8405 2430304.3595
CXB2/ByJ m 5618646.3333 1146839.236 7949304.0738 3287988.5928
CXB3/ByJ m 4145031.9 1404585.4726 6999493.0146 1290570.7854
CXB4/ByJ m 2730674.8 1404585.4726 5585135.9146 0.0
CXB6/ByJ m 3727653.0 1146839.236 6058310.7405 1396995.2595
CXB7/ByJ m 3658087.65 1404585.4726 6512548.7646 803626.5354
CXB8/HiAJ m 4967967.8333 1146839.236 7298625.5738 2637310.0928
CXB9/HiAJ m 7832669.0 1146839.236 10163326.7405 5502011.2595
DBA/2J m 2731691.825 993191.9125 4750100.6358 713283.0142




  GWAS USING LINEAR MIXED MODELS