Project measure / variable:   HMDPpheno8   I1P

ID, description, units MPD:50348   I1P   liver inositol 1-phosphate (I1P) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver inositol 1-phosphate (I1P) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means1142382   None
Median of the strain means1144248   None
SD of the strain means± 215885
Coefficient of variation (CV)0.189
Min–max range of strain means655093   –   1952966   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 1270797160713.21 60514150510.1526 1.8287 0.0571
Residuals 34 1125132774235.68 33092140418.6964


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 1224539.0 0.0   1   0.0 0.0 1224539.0, 1224539.0 0.38
A/J m 1170476.0 157555.0   2   111408.0 0.135 1059068.0, 1281884.0 0.13
AKR/J m 1226536.0 0.0   1   0.0 0.0 1226536.0, 1226536.0 0.39
AXB10/PgnJ m 1030175.0 0.0   1   0.0 0.0 1030175.0, 1030175.0 -0.52
AXB12/PgnJ m 982033.0 0.0   1   0.0 0.0 982033.0, 982033.0 -0.74
AXB13/PgnJ m 1340609.0 0.0   1   0.0 0.0 1340609.0, 1340609.0 0.92
AXB15/PgnJ m 1388126.0 0.0   1   0.0 0.0 1388126.0, 1388126.0 1.14
AXB19a/PgnJ m 1124626.0 0.0   1   0.0 0.0 1124626.0, 1124626.0 -0.08
AXB19b/PgnJ m 1229119.0 341914.0   2   241770.0 0.278 987349.0, 1470889.0 0.4
AXB19/PgnJ m 1028751.0 0.0   1   0.0 0.0 1028751.0, 1028751.0 -0.53
AXB1/PgnJ m 1351318.0 0.0   1   0.0 0.0 1351318.0, 1351318.0 0.97
AXB23/PgnJ m 1165421.0 0.0   1   0.0 0.0 1165421.0, 1165421.0 0.11
AXB24/PgnJ m 1189051.0 114854.0   2   81214.0 0.0966 1107837.0, 1270265.0 0.22
AXB2/PgnJ m 1200322.0 0.0   1   0.0 0.0 1200322.0, 1200322.0 0.27
AXB4/PgnJ m 956202.0 0.0   1   0.0 0.0 956202.0, 956202.0 -0.86
AXB5/PgnJ m 910880.0 0.0   1   0.0 0.0 910880.0, 910880.0 -1.07
AXB6/PgnJ m 1260546.0 0.0   1   0.0 0.0 1260546.0, 1260546.0 0.55
AXB8/PgnJ m 863538.0 0.0   1   0.0 0.0 863538.0, 863538.0 -1.29
BALB/cJ m 1210552.0 173535.0   3 100191.0 0.143 1081215.0, 1407766.0 0.32
BTBR T+ Itpr3tf/J m 972458.0 0.0   1   0.0 0.0 972458.0, 972458.0 -0.79
BUB/BnJ m 939277.0 0.0   1   0.0 0.0 939277.0, 939277.0 -0.94
BXA11/PgnJ m 1952966.0 0.0   1   0.0 0.0 1952966.0, 1952966.0 3.75
BXA12/PgnJ m 879601.0 0.0   1   0.0 0.0 879601.0, 879601.0 -1.22
BXA13/PgnJ m 1325761.0 0.0   1   0.0 0.0 1325761.0, 1325761.0 0.85
BXA14/PgnJ m 655093.0 0.0   1   0.0 0.0 655093.0, 655093.0 -2.26
BXA16/PgnJ m 975544.0 78692.0   2   55643.0 0.0807 919901.0, 1031188.0 -0.77
BXA1/PgnJ m 1075093.0 0.0   1   0.0 0.0 1075093.0, 1075093.0 -0.31
BXA24/PgnJ m 1165840.0 0.0   1   0.0 0.0 1165840.0, 1165840.0 0.11
BXA25/PgnJ m 1381550.0 0.0   1   0.0 0.0 1381550.0, 1381550.0 1.11
BXA26/PgnJ m 1044281.0 0.0   1   0.0 0.0 1044281.0, 1044281.0 -0.45
BXA2/PgnJ m 1153092.0 0.0   1   0.0 0.0 1153092.0, 1153092.0 0.05
BXA4/PgnJ m 1078133.0 0.0   1   0.0 0.0 1078133.0, 1078133.0 -0.3
BXA7/PgnJ m 959925.0 0.0   1   0.0 0.0 959925.0, 959925.0 -0.85
BXA8/PgnJ m 1123207.0 0.0   1   0.0 0.0 1123207.0, 1123207.0 -0.09
BXD11/TyJ m 1519341.0 0.0   1   0.0 0.0 1519341.0, 1519341.0 1.75
BXD12/TyJ m 1372948.0 0.0   1   0.0 0.0 1372948.0, 1372948.0 1.07
BXD13/TyJ m 1320199.0 0.0   1   0.0 0.0 1320199.0, 1320199.0 0.82
BXD14/TyJ m 1148796.0 0.0   1   0.0 0.0 1148796.0, 1148796.0 0.03
BXD15/TyJ m 1805446.0 0.0   1   0.0 0.0 1805446.0, 1805446.0 3.07
BXD18/TyJ m 1221741.0 0.0   1   0.0 0.0 1221741.0, 1221741.0 0.37
BXD19/TyJ m 1162044.0 211703.0   2   149696.0 0.182 1012348.0, 1311740.0 0.09
BXD1/TyJ m 974676.0 0.0   1   0.0 0.0 974676.0, 974676.0 -0.78
BXD20/TyJ m 1149723.0 0.0   1   0.0 0.0 1149723.0, 1149723.0 0.03
BXD21/TyJ m 1006225.0 0.0   1   0.0 0.0 1006225.0, 1006225.0 -0.63
BXD22/TyJ m 1099263.0 0.0   1   0.0 0.0 1099263.0, 1099263.0 -0.2
BXD24/TyJ m 1521339.0 0.0   1   0.0 0.0 1521339.0, 1521339.0 1.76
BXD24/TyJ-Cep290rd16/J m 1247317.0 0.0   1   0.0 0.0 1247317.0, 1247317.0 0.49
BXD28/TyJ m 943858.0 372108.0   2   263120.0 0.394 680738.0, 1206978.0 -0.92
BXD29-Tlr4lps-2J/J m 1085271.0 0.0   1   0.0 0.0 1085271.0, 1085271.0 -0.26
BXD2/TyJ m 1029656.0 0.0   1   0.0 0.0 1029656.0, 1029656.0 -0.52
BXD32/TyJ m 1273653.0 0.0   1   0.0 0.0 1273653.0, 1273653.0 0.61
BXD33/TyJ m 1120342.0 0.0   1   0.0 0.0 1120342.0, 1120342.0 -0.1
BXD34/TyJ m 1368118.0 0.0   1   0.0 0.0 1368118.0, 1368118.0 1.05
BXD36/TyJ m 1416228.0 0.0   1   0.0 0.0 1416228.0, 1416228.0 1.27
BXD38/TyJ m 1371458.0 0.0   1   0.0 0.0 1371458.0, 1371458.0 1.06
BXD39/TyJ m 1139699.0 0.0   1   0.0 0.0 1139699.0, 1139699.0 -0.01
BXD40/TyJ m 1371587.0 0.0   1   0.0 0.0 1371587.0, 1371587.0 1.06
BXD42/TyJ m 844781.0 0.0   1   0.0 0.0 844781.0, 844781.0 -1.38
BXD5/TyJ m 1017363.0 0.0   1   0.0 0.0 1017363.0, 1017363.0 -0.58
BXD6/TyJ m 1189946.0 0.0   1   0.0 0.0 1189946.0, 1189946.0 0.22
BXD8/TyJ m 1054920.0 0.0   1   0.0 0.0 1054920.0, 1054920.0 -0.41
BXD9/TyJ m 1308917.0 0.0   1   0.0 0.0 1308917.0, 1308917.0 0.77
BXH10/TyJ m 687650.0 0.0   1   0.0 0.0 687650.0, 687650.0 -2.11
BXH19/TyJ m 892485.0 0.0   1   0.0 0.0 892485.0, 892485.0 -1.16
BXH20/KccJ m 1597956.0 0.0   1   0.0 0.0 1597956.0, 1597956.0 2.11
BXH22/KccJ m 1301770.0 0.0   1   0.0 0.0 1301770.0, 1301770.0 0.74
BXH2/TyJ m 1055058.0 0.0   1   0.0 0.0 1055058.0, 1055058.0 -0.4
BXH4/TyJ m 1109196.0 231971.0   2   164029.0 0.209 945168.0, 1273225.0 -0.15
BXH6/TyJ m 1098107.0 0.0   1   0.0 0.0 1098107.0, 1098107.0 -0.21
BXH7/TyJ m 1079948.0 0.0   1   0.0 0.0 1079948.0, 1079948.0 -0.29
BXH8/TyJ m 867454.0 0.0   1   0.0 0.0 867454.0, 867454.0 -1.27
BXH9/TyJ m 1323269.0 0.0   1   0.0 0.0 1323269.0, 1323269.0 0.84
C3H/HeJ m 1254240.0 195399.0   2   138168.0 0.156 1116072.0, 1392408.0 0.52
C57BL/6J m 1151416.0 182152.0   5 81461.0 0.158 867545.0, 1355367.0 0.04
C57L/J m 1355588.0 0.0   1   0.0 0.0 1355588.0, 1355588.0 0.99
C58/J m 764560.0 0.0   1   0.0 0.0 764560.0, 764560.0 -1.75
CAST/EiJ m 939893.0 0.0   1   0.0 0.0 939893.0, 939893.0 -0.94
CBA/J m 1012358.0 0.0   1   0.0 0.0 1012358.0, 1012358.0 -0.6
CE/J m 1181816.0 0.0   1   0.0 0.0 1181816.0, 1181816.0 0.18
CXB11/HiAJ m 996874.0 30954.0   2   21888.0 0.0311 974986.0, 1018761.0 -0.67
CXB12/HiAJ m 946505.0 207042.0   2   146401.0 0.219 800104.0, 1092906.0 -0.91
CXB13/HiAJ m 1355302.0 239010.0   3 137992.0 0.176 1197829.0, 1630323.0 0.99
CXB1/ByJ m 992127.0 265848.0   3 153487.0 0.268 724468.0, 1256126.0 -0.7
CXB2/ByJ m 905025.0 93214.0   3 53817.0 0.103 832226.0, 1010083.0 -1.1
CXB3/ByJ m 1154311.0 217329.0   2   153675.0 0.188 1000636.0, 1307986.0 0.06
CXB4/ByJ m 911190.0 69945.0   2   49459.0 0.0768 861731.0, 960649.0 -1.07
CXB6/ByJ m 1054416.0 71418.0   3 41233.0 0.0677 972164.0, 1100682.0 -0.41
CXB7/ByJ m 809992.0 34859.0   2   24649.0 0.043 785342.0, 834641.0 -1.54
CXB8/HiAJ m 881763.0 139005.0   3 80254.0 0.158 763575.0, 1034910.0 -1.21
CXB9/HiAJ m 801187.0 170674.0   3 98539.0 0.213 622057.0, 961913.0 -1.58
DBA/2J m 1161550.0 78637.0   4 39318.0 0.0677 1055602.0, 1244568.0 0.09
FVB/NJ m 1057509.0 0.0   1   0.0 0.0 1057509.0, 1057509.0 -0.39
I/LnJ m 1707328.0 0.0   1   0.0 0.0 1707328.0, 1707328.0 2.62
KK/HlJ m 1257236.0 0.0   1   0.0 0.0 1257236.0, 1257236.0 0.53
LG/J m 1258240.0 0.0   1   0.0 0.0 1258240.0, 1258240.0 0.54
LP/J m 960373.0 0.0   1   0.0 0.0 960373.0, 960373.0 -0.84
MA/MyJ m 1237471.0 0.0   1   0.0 0.0 1237471.0, 1237471.0 0.44
NOD/ShiLtJ m 1116052.0 0.0   1   0.0 0.0 1116052.0, 1116052.0 -0.12
NON/ShiLtJ m 1005414.0 0.0   1   0.0 0.0 1005414.0, 1005414.0 -0.63
NZW/LacJ m 1087856.0 0.0   1   0.0 0.0 1087856.0, 1087856.0 -0.25
PL/J m 1197219.0 0.0   1   0.0 0.0 1197219.0, 1197219.0 0.25
RIIIS/J m 1356621.0 0.0   1   0.0 0.0 1356621.0, 1356621.0 0.99
SEA/GnJ m 1171567.0 0.0   1   0.0 0.0 1171567.0, 1171567.0 0.14
SJL/J m 931282.0 0.0   1   0.0 0.0 931282.0, 931282.0 -0.98
SM/J m 1221182.0 0.0   1   0.0 0.0 1221182.0, 1221182.0 0.37
SWR/J m 1264589.0 0.0   1   0.0 0.0 1264589.0, 1264589.0 0.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 1170475.7 128631.5288 1431886.4182 909064.9818
AXB19b/PgnJ m 1229118.75 128631.5288 1490529.4682 967708.0318
AXB24/PgnJ m 1189050.9 128631.5288 1450461.6182 927640.1818
BALB/cJ m 1210551.8333 105027.2035 1423992.791 997110.8757
BXA16/PgnJ m 975544.35 128631.5288 1236955.0682 714133.6318
BXD19/TyJ m 1162044.0 128631.5288 1423454.7182 900633.2818
BXD28/TyJ m 943857.85 128631.5288 1205268.5682 682447.1318
BXH4/TyJ m 1109196.5 128631.5288 1370607.2182 847785.7818
C3H/HeJ m 1254240.0 128631.5288 1515650.7182 992829.2818
C57BL/6J m 1151416.06 81353.722 1316746.7149 986085.4051
CXB11/HiAJ m 996873.85 128631.5288 1258284.5682 735463.1318
CXB12/HiAJ m 946504.85 128631.5288 1207915.5682 685094.1318
CXB13/HiAJ m 1355302.4667 105027.2035 1568743.4243 1141861.509
CXB1/ByJ m 992126.9333 105027.2035 1205567.891 778685.9757
CXB2/ByJ m 905024.5667 105027.2035 1118465.5243 691583.609
CXB3/ByJ m 1154311.25 128631.5288 1415721.9682 892900.5318
CXB4/ByJ m 911190.0 128631.5288 1172600.7182 649779.2818
CXB6/ByJ m 1054416.2667 105027.2035 1267857.2243 840975.309
CXB7/ByJ m 809991.55 128631.5288 1071402.2682 548580.8318
CXB8/HiAJ m 881762.6 105027.2035 1095203.5576 668321.6424
CXB9/HiAJ m 801186.7333 105027.2035 1014627.691 587745.7757
DBA/2J m 1161550.45 90956.2263 1346395.7415 976705.1585




  GWAS USING LINEAR MIXED MODELS