Phenotype measure:   HMDPpheno8   PEA

ID, description, units MPD:50347   PEA   liver phosphoethanolamine (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - liver phosphoethanolamine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means39300   None
Median of the strain means38607   None
SD of the strain means± 6044
Coefficient of variation (CV)0.154
Min–max range of strain means25231   –   54604   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 1991678017.3728 94841810.3511 3.0693 0.0018
Residuals 34 1050606479.1672 30900190.5637


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 42862.0 0.0   1   0.0 0.0 42862.0, 42862.0 0.59
A/J m 37585.0 794.0   2   561.0 0.0211 37024.0, 38146.0 -0.28
AKR/J m 36821.0 0.0   1   0.0 0.0 36821.0, 36821.0 -0.41
AXB10/PgnJ m 44494.0 0.0   1   0.0 0.0 44494.0, 44494.0 0.86
AXB12/PgnJ m 37307.0 0.0   1   0.0 0.0 37307.0, 37307.0 -0.33
AXB13/PgnJ m 40558.0 0.0   1   0.0 0.0 40558.0, 40558.0 0.21
AXB15/PgnJ m 34928.0 0.0   1   0.0 0.0 34928.0, 34928.0 -0.72
AXB19a/PgnJ m 35667.0 0.0   1   0.0 0.0 35667.0, 35667.0 -0.6
AXB19b/PgnJ m 49140.0 199.0   2   140.0 0.00404 49000.0, 49280.0 1.63
AXB19/PgnJ m 44395.0 0.0   1   0.0 0.0 44395.0, 44395.0 0.84
AXB1/PgnJ m 37635.0 0.0   1   0.0 0.0 37635.0, 37635.0 -0.28
AXB23/PgnJ m 36816.0 0.0   1   0.0 0.0 36816.0, 36816.0 -0.41
AXB24/PgnJ m 35720.0 3700.0   2   2616.0 0.104 33104.0, 38336.0 -0.59
AXB2/PgnJ m 43968.0 0.0   1   0.0 0.0 43968.0, 43968.0 0.77
AXB4/PgnJ m 42647.0 0.0   1   0.0 0.0 42647.0, 42647.0 0.55
AXB5/PgnJ m 36152.0 0.0   1   0.0 0.0 36152.0, 36152.0 -0.52
AXB6/PgnJ m 39256.0 0.0   1   0.0 0.0 39256.0, 39256.0 -0.01
AXB8/PgnJ m 31595.0 0.0   1   0.0 0.0 31595.0, 31595.0 -1.27
BALB/cJ m 36734.0 4168.0   3 2406.0 0.113 33079.0, 41273.0 -0.42
BTBR T+ Itpr3tf/J m 37241.0 0.0   1   0.0 0.0 37241.0, 37241.0 -0.34
BUB/BnJ m 44095.0 0.0   1   0.0 0.0 44095.0, 44095.0 0.79
BXA11/PgnJ m 36563.0 0.0   1   0.0 0.0 36563.0, 36563.0 -0.45
BXA12/PgnJ m 32023.0 0.0   1   0.0 0.0 32023.0, 32023.0 -1.2
BXA13/PgnJ m 45064.0 0.0   1   0.0 0.0 45064.0, 45064.0 0.95
BXA14/PgnJ m 31712.0 0.0   1   0.0 0.0 31712.0, 31712.0 -1.26
BXA16/PgnJ m 32976.0 1267.0   2   896.0 0.0384 32080.0, 33872.0 -1.05
BXA1/PgnJ m 38590.0 0.0   1   0.0 0.0 38590.0, 38590.0 -0.12
BXA24/PgnJ m 42699.0 0.0   1   0.0 0.0 42699.0, 42699.0 0.56
BXA25/PgnJ m 35565.0 0.0   1   0.0 0.0 35565.0, 35565.0 -0.62
BXA26/PgnJ m 40620.0 0.0   1   0.0 0.0 40620.0, 40620.0 0.22
BXA2/PgnJ m 44310.0 0.0   1   0.0 0.0 44310.0, 44310.0 0.83
BXA4/PgnJ m 34269.0 0.0   1   0.0 0.0 34269.0, 34269.0 -0.83
BXA7/PgnJ m 41076.0 0.0   1   0.0 0.0 41076.0, 41076.0 0.29
BXA8/PgnJ m 31473.0 0.0   1   0.0 0.0 31473.0, 31473.0 -1.29
BXD11/TyJ m 40412.0 0.0   1   0.0 0.0 40412.0, 40412.0 0.18
BXD12/TyJ m 44423.0 0.0   1   0.0 0.0 44423.0, 44423.0 0.85
BXD13/TyJ m 33133.0 0.0   1   0.0 0.0 33133.0, 33133.0 -1.02
BXD14/TyJ m 36658.0 0.0   1   0.0 0.0 36658.0, 36658.0 -0.44
BXD15/TyJ m 40000.0 0.0   1   0.0 0.0 40000.0, 40000.0 0.12
BXD18/TyJ m 42501.0 0.0   1   0.0 0.0 42501.0, 42501.0 0.53
BXD19/TyJ m 35010.0 4900.0   2   3465.0 0.14 31545.0, 38475.0 -0.71
BXD1/TyJ m 38787.0 0.0   1   0.0 0.0 38787.0, 38787.0 -0.08
BXD20/TyJ m 43461.0 0.0   1   0.0 0.0 43461.0, 43461.0 0.69
BXD21/TyJ m 41899.0 0.0   1   0.0 0.0 41899.0, 41899.0 0.43
BXD22/TyJ m 37218.0 0.0   1   0.0 0.0 37218.0, 37218.0 -0.34
BXD24/TyJ m 32262.0 0.0   1   0.0 0.0 32262.0, 32262.0 -1.16
BXD24/TyJ-Cep290rd16/J m 33496.0 0.0   1   0.0 0.0 33496.0, 33496.0 -0.96
BXD28/TyJ m 41000.0 1874.0   2   1325.0 0.0457 39675.0, 42325.0 0.28
BXD29-Tlr4lps-2J/J m 54057.0 0.0   1   0.0 0.0 54057.0, 54057.0 2.44
BXD2/TyJ m 53155.0 0.0   1   0.0 0.0 53155.0, 53155.0 2.29
BXD32/TyJ m 28895.0 0.0   1   0.0 0.0 28895.0, 28895.0 -1.72
BXD33/TyJ m 39074.0 0.0   1   0.0 0.0 39074.0, 39074.0 -0.04
BXD34/TyJ m 37192.0 0.0   1   0.0 0.0 37192.0, 37192.0 -0.35
BXD36/TyJ m 34468.0 0.0   1   0.0 0.0 34468.0, 34468.0 -0.8
BXD38/TyJ m 40680.0 0.0   1   0.0 0.0 40680.0, 40680.0 0.23
BXD39/TyJ m 35266.0 0.0   1   0.0 0.0 35266.0, 35266.0 -0.67
BXD40/TyJ m 37809.0 0.0   1   0.0 0.0 37809.0, 37809.0 -0.25
BXD42/TyJ m 36368.0 0.0   1   0.0 0.0 36368.0, 36368.0 -0.49
BXD5/TyJ m 35719.0 0.0   1   0.0 0.0 35719.0, 35719.0 -0.59
BXD6/TyJ m 37562.0 0.0   1   0.0 0.0 37562.0, 37562.0 -0.29
BXD8/TyJ m 43122.0 0.0   1   0.0 0.0 43122.0, 43122.0 0.63
BXD9/TyJ m 33308.0 0.0   1   0.0 0.0 33308.0, 33308.0 -0.99
BXH10/TyJ m 38624.0 0.0   1   0.0 0.0 38624.0, 38624.0 -0.11
BXH19/TyJ m 33509.0 0.0   1   0.0 0.0 33509.0, 33509.0 -0.96
BXH20/KccJ m 36853.0 0.0   1   0.0 0.0 36853.0, 36853.0 -0.4
BXH22/KccJ m 35728.0 0.0   1   0.0 0.0 35728.0, 35728.0 -0.59
BXH2/TyJ m 33133.0 0.0   1   0.0 0.0 33133.0, 33133.0 -1.02
BXH4/TyJ m 30916.0 1039.0   2   735.0 0.0336 30181.0, 31650.0 -1.39
BXH6/TyJ m 25231.0 0.0   1   0.0 0.0 25231.0, 25231.0 -2.33
BXH7/TyJ m 42915.0 0.0   1   0.0 0.0 42915.0, 42915.0 0.6
BXH8/TyJ m 38155.0 0.0   1   0.0 0.0 38155.0, 38155.0 -0.19
BXH9/TyJ m 45695.0 0.0   1   0.0 0.0 45695.0, 45695.0 1.06
C3H/HeJ m 27074.0 2250.0   2   1591.0 0.0831 25484.0, 28665.0 -2.02
C57BL/6J m 38320.0 4311.0   5 1928.0 0.112 34046.0, 44740.0 -0.16
C57L/J m 35232.0 0.0   1   0.0 0.0 35232.0, 35232.0 -0.67
C58/J m 28031.0 0.0   1   0.0 0.0 28031.0, 28031.0 -1.86
CAST/EiJ m 33302.0 0.0   1   0.0 0.0 33302.0, 33302.0 -0.99
CBA/J m 28813.0 0.0   1   0.0 0.0 28813.0, 28813.0 -1.74
CE/J m 43864.0 0.0   1   0.0 0.0 43864.0, 43864.0 0.76
CXB11/HiAJ m 45653.0 6008.0   2   4248.0 0.132 41405.0, 49901.0 1.05
CXB12/HiAJ m 47041.0 4770.0   2   3373.0 0.101 43668.0, 50414.0 1.28
CXB13/HiAJ m 44526.0 5763.0   3 3327.0 0.129 38958.0, 50466.0 0.86
CXB1/ByJ m 32902.0 5231.0   3 3020.0 0.159 29652.0, 38936.0 -1.06
CXB2/ByJ m 46580.0 1174.0   3 678.0 0.0252 45258.0, 47503.0 1.2
CXB3/ByJ m 51680.0 12576.0   2   8893.0 0.243 42788.0, 60573.0 2.05
CXB4/ByJ m 33431.0 5688.0   2   4022.0 0.17 29408.0, 37453.0 -0.97
CXB6/ByJ m 44148.0 9600.0   3 5543.0 0.217 34255.0, 53426.0 0.8
CXB7/ByJ m 42251.0 10949.0   2   7742.0 0.259 34509.0, 49993.0 0.49
CXB8/HiAJ m 46782.0 6197.0   3 3578.0 0.132 39636.0, 50676.0 1.24
CXB9/HiAJ m 40050.0 6275.0   3 3623.0 0.157 36220.0, 47292.0 0.12
DBA/2J m 42230.0 4431.0   4 2215.0 0.105 36872.0, 47539.0 0.48
FVB/NJ m 54604.0 0.0   1   0.0 0.0 54604.0, 54604.0 2.53
I/LnJ m 40377.0 0.0   1   0.0 0.0 40377.0, 40377.0 0.18
KK/HlJ m 41468.0 0.0   1   0.0 0.0 41468.0, 41468.0 0.36
LG/J m 36111.0 0.0   1   0.0 0.0 36111.0, 36111.0 -0.53
LP/J m 45592.0 0.0   1   0.0 0.0 45592.0, 45592.0 1.04
MA/MyJ m 37466.0 0.0   1   0.0 0.0 37466.0, 37466.0 -0.3
NOD/ShiLtJ m 39310.0 0.0   1   0.0 0.0 39310.0, 39310.0 0.0
NON/ShiLtJ m 39754.0 0.0   1   0.0 0.0 39754.0, 39754.0 0.08
NZW/LacJ m 46433.0 0.0   1   0.0 0.0 46433.0, 46433.0 1.18
PL/J m 50515.0 0.0   1   0.0 0.0 50515.0, 50515.0 1.86
RIIIS/J m 30730.0 0.0   1   0.0 0.0 30730.0, 30730.0 -1.42
SEA/GnJ m 42987.0 0.0   1   0.0 0.0 42987.0, 42987.0 0.61
SJL/J m 53266.0 0.0   1   0.0 0.0 53266.0, 53266.0 2.31
SM/J m 45467.0 0.0   1   0.0 0.0 45467.0, 45467.0 1.02
SWR/J m 49563.0 0.0   1   0.0 0.0 49563.0, 49563.0 1.7


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 37585.1 3930.6609 45573.1641 29597.0359
AXB19b/PgnJ m 49140.0 3930.6609 57128.0641 41151.9359
AXB24/PgnJ m 35720.1 3930.6609 43708.1641 27732.0359
BALB/cJ m 36734.4333 3209.3712 43256.6603 30212.2063
BXA16/PgnJ m 32976.0 3930.6609 40964.0641 24987.9359
BXD19/TyJ m 35010.15 3930.6609 42998.2141 27022.0859
BXD28/TyJ m 41000.1 3930.6609 48988.1641 33012.0359
BXH4/TyJ m 30915.75 3930.6609 38903.8141 22927.6859
C3H/HeJ m 27074.3 3930.6609 35062.3641 19086.2359
C57BL/6J m 38320.32 2485.9682 43372.4153 33268.2247
CXB11/HiAJ m 45653.2 3930.6609 53641.2641 37665.1359
CXB12/HiAJ m 47040.8 3930.6609 55028.8641 39052.7359
CXB13/HiAJ m 44525.9333 3209.3712 51048.1603 38003.7063
CXB1/ByJ m 32901.6 3209.3712 39423.827 26379.373
CXB2/ByJ m 46579.9 3209.3712 53102.127 40057.673
CXB3/ByJ m 51680.35 3930.6609 59668.4141 43692.2859
CXB4/ByJ m 33430.75 3930.6609 41418.8141 25442.6859
CXB6/ByJ m 44147.6667 3209.3712 50669.8937 37625.4397
CXB7/ByJ m 42251.15 3930.6609 50239.2141 34263.0859
CXB8/HiAJ m 46781.8333 3209.3712 53304.0603 40259.6063
CXB9/HiAJ m 40050.3 3209.3712 46572.527 33528.073
DBA/2J m 42230.475 2779.397 47878.8893 36582.0607




  GWAS USING LINEAR MIXED MODELS