Phenotype measure:   HMDPpheno8   undecanedioate

ID, description, units MPD:50335   undecanedioate   undecanedioate (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   105 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - undecanedioate (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested105 strains
Mean of the strain means11107   None
Median of the strain means7872   None
SD of the strain means± 10234
Coefficient of variation (CV)0.921
Min–max range of strain means4165   –   68891   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 2404665351.6987 114507873.8904 1.7221 0.0771
Residuals 34 2260714541.2712 66491604.155


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 10620.0 0.0   1   0.0 0.0 10620.0, 10620.0 -0.05
A/J m 21792.0 14355.0   2   10150.0 0.659 11641.0, 31942.0 1.04
AKR/J m 23599.0 0.0   1   0.0 0.0 23599.0, 23599.0 1.22
AXB10/PgnJ m 6075.0 0.0   1   0.0 0.0 6075.0, 6075.0 -0.49
AXB12/PgnJ m 7539.0 0.0   1   0.0 0.0 7539.0, 7539.0 -0.35
AXB13/PgnJ m 9369.0 0.0   1   0.0 0.0 9369.0, 9369.0 -0.17
AXB15/PgnJ m 6636.0 0.0   1   0.0 0.0 6636.0, 6636.0 -0.44
AXB19a/PgnJ m 5701.0 0.0   1   0.0 0.0 5701.0, 5701.0 -0.53
AXB19b/PgnJ m 8630.0 5455.0   2   3857.0 0.632 4773.0, 12487.0 -0.24
AXB19/PgnJ m 5971.0 0.0   1   0.0 0.0 5971.0, 5971.0 -0.5
AXB1/PgnJ m 15802.0 0.0   1   0.0 0.0 15802.0, 15802.0 0.46
AXB23/PgnJ m 7872.0 0.0   1   0.0 0.0 7872.0, 7872.0 -0.32
AXB24/PgnJ m 9364.0 897.0   2   634.0 0.0958 8730.0, 9998.0 -0.17
AXB2/PgnJ m 9184.0 0.0   1   0.0 0.0 9184.0, 9184.0 -0.19
AXB4/PgnJ m 8626.0 0.0   1   0.0 0.0 8626.0, 8626.0 -0.24
AXB5/PgnJ m 6059.0 0.0   1   0.0 0.0 6059.0, 6059.0 -0.49
AXB6/PgnJ m 6386.0 0.0   1   0.0 0.0 6386.0, 6386.0 -0.46
AXB8/PgnJ m 11224.0 0.0   1   0.0 0.0 11224.0, 11224.0 0.01
BALB/cJ m 34583.0 29648.0   3 17117.0 0.857 9646.0, 67364.0 2.29
BTBR T+ Itpr3tf/J m 63171.0 0.0   1   0.0 0.0 63171.0, 63171.0 5.09
BUB/BnJ m 9173.0 0.0   1   0.0 0.0 9173.0, 9173.0 -0.19
BXA11/PgnJ m 5160.0 0.0   1   0.0 0.0 5160.0, 5160.0 -0.58
BXA12/PgnJ m 5782.0 0.0   1   0.0 0.0 5782.0, 5782.0 -0.52
BXA13/PgnJ m 48170.0 0.0   1   0.0 0.0 48170.0, 48170.0 3.62
BXA14/PgnJ m 4654.0 0.0   1   0.0 0.0 4654.0, 4654.0 -0.63
BXA16/PgnJ m 5910.0 543.0   2   384.0 0.0918 5526.0, 6294.0 -0.51
BXA1/PgnJ m 6307.0 0.0   1   0.0 0.0 6307.0, 6307.0 -0.47
BXA24/PgnJ m 8217.0 0.0   1   0.0 0.0 8217.0, 8217.0 -0.28
BXA25/PgnJ m 13936.0 0.0   1   0.0 0.0 13936.0, 13936.0 0.28
BXA26/PgnJ m 7838.0 0.0   1   0.0 0.0 7838.0, 7838.0 -0.32
BXA2/PgnJ m 5292.0 0.0   1   0.0 0.0 5292.0, 5292.0 -0.57
BXA4/PgnJ m 7809.0 0.0   1   0.0 0.0 7809.0, 7809.0 -0.32
BXA7/PgnJ m 11040.0 0.0   1   0.0 0.0 11040.0, 11040.0 -0.01
BXA8/PgnJ m 7101.0 0.0   1   0.0 0.0 7101.0, 7101.0 -0.39
BXD11/TyJ m 9126.0 0.0   1   0.0 0.0 9126.0, 9126.0 -0.19
BXD12/TyJ m 20594.0 0.0   1   0.0 0.0 20594.0, 20594.0 0.93
BXD13/TyJ m 6316.0 0.0   1   0.0 0.0 6316.0, 6316.0 -0.47
BXD14/TyJ m 4530.0 0.0   1   0.0 0.0 4530.0, 4530.0 -0.64
BXD15/TyJ m 7548.0 0.0   1   0.0 0.0 7548.0, 7548.0 -0.35
BXD18/TyJ m 12610.0 0.0   1   0.0 0.0 12610.0, 12610.0 0.15
BXD19/TyJ m 4165.0 703.0   2   497.0 0.169 3668.0, 4662.0 -0.68
BXD1/TyJ m 7292.0 0.0   1   0.0 0.0 7292.0, 7292.0 -0.37
BXD20/TyJ m 7943.0 0.0   1   0.0 0.0 7943.0, 7943.0 -0.31
BXD21/TyJ m 7864.0 0.0   1   0.0 0.0 7864.0, 7864.0 -0.32
BXD22/TyJ m 21842.0 0.0   1   0.0 0.0 21842.0, 21842.0 1.05
BXD24/TyJ m 6107.0 0.0   1   0.0 0.0 6107.0, 6107.0 -0.49
BXD24/TyJ-Cep290rd16/J m 11949.0 0.0   1   0.0 0.0 11949.0, 11949.0 0.08
BXD28/TyJ m 6453.0 849.0   2   600.0 0.132 5853.0, 7053.0 -0.45
BXD29-Tlr4lps-2J/J m 8794.0 0.0   1   0.0 0.0 8794.0, 8794.0 -0.23
BXD2/TyJ m 6603.0 0.0   1   0.0 0.0 6603.0, 6603.0 -0.44
BXD32/TyJ m 4748.0 0.0   1   0.0 0.0 4748.0, 4748.0 -0.62
BXD33/TyJ m 19084.0 0.0   1   0.0 0.0 19084.0, 19084.0 0.78
BXD34/TyJ m 8702.0 0.0   1   0.0 0.0 8702.0, 8702.0 -0.23
BXD36/TyJ m 6904.0 0.0   1   0.0 0.0 6904.0, 6904.0 -0.41
BXD38/TyJ m 6354.0 0.0   1   0.0 0.0 6354.0, 6354.0 -0.46
BXD39/TyJ m 6076.0 0.0   1   0.0 0.0 6076.0, 6076.0 -0.49
BXD40/TyJ m 6804.0 0.0   1   0.0 0.0 6804.0, 6804.0 -0.42
BXD42/TyJ m 6176.0 0.0   1   0.0 0.0 6176.0, 6176.0 -0.48
BXD5/TyJ m 7053.0 0.0   1   0.0 0.0 7053.0, 7053.0 -0.4
BXD6/TyJ m 6134.0 0.0   1   0.0 0.0 6134.0, 6134.0 -0.49
BXD8/TyJ m 6513.0 0.0   1   0.0 0.0 6513.0, 6513.0 -0.45
BXD9/TyJ m 7920.0 0.0   1   0.0 0.0 7920.0, 7920.0 -0.31
BXH10/TyJ m 7647.0 0.0   1   0.0 0.0 7647.0, 7647.0 -0.34
BXH19/TyJ m 7368.0 0.0   1   0.0 0.0 7368.0, 7368.0 -0.37
BXH20/KccJ m 7345.0 0.0   1   0.0 0.0 7345.0, 7345.0 -0.37
BXH22/KccJ m 9639.0 0.0   1   0.0 0.0 9639.0, 9639.0 -0.14
BXH2/TyJ m 6130.0 0.0   1   0.0 0.0 6130.0, 6130.0 -0.49
BXH4/TyJ m 9840.0 2339.0   2   1654.0 0.238 8186.0, 11494.0 -0.12
BXH6/TyJ m 6003.0 0.0   1   0.0 0.0 6003.0, 6003.0 -0.5
BXH7/TyJ m 5975.0 0.0   1   0.0 0.0 5975.0, 5975.0 -0.5
BXH8/TyJ m 22023.0 0.0   1   0.0 0.0 22023.0, 22023.0 1.07
BXH9/TyJ m 9980.0 0.0   1   0.0 0.0 9980.0, 9980.0 -0.11
C3H/HeJ m 9487.0 4297.0   2   3038.0 0.453 6449.0, 12525.0 -0.16
C57BL/6J m 9853.0 5074.0   5 2269.0 0.515 6316.0, 18538.0 -0.12
C57L/J m 5406.0 0.0   1   0.0 0.0 5406.0, 5406.0 -0.56
CAST/EiJ m 68891.0 0.0   1   0.0 0.0 68891.0, 68891.0 5.65
CBA/J m 9068.0 0.0   1   0.0 0.0 9068.0, 9068.0 -0.2
CE/J m 9432.0 0.0   1   0.0 0.0 9432.0, 9432.0 -0.16
CXB11/HiAJ m 7604.0 918.0   2   649.0 0.121 6955.0, 8253.0 -0.34
CXB12/HiAJ m 8795.0 1318.0   2   932.0 0.15 7862.0, 9727.0 -0.23
CXB13/HiAJ m 7335.0 1946.0   3 1123.0 0.265 5967.0, 9563.0 -0.37
CXB1/ByJ m 6530.0 670.0   3 387.0 0.103 5901.0, 7235.0 -0.45
CXB2/ByJ m 9394.0 2337.0   3 1349.0 0.249 7838.0, 12082.0 -0.17
CXB3/ByJ m 6753.0 1218.0   2   861.0 0.18 5891.0, 7614.0 -0.43
CXB4/ByJ m 8742.0 400.0   2   283.0 0.0457 8459.0, 9025.0 -0.23
CXB6/ByJ m 11797.0 5700.0   3 3291.0 0.483 8265.0, 18373.0 0.07
CXB7/ByJ m 8082.0 1952.0   2   1380.0 0.242 6701.0, 9462.0 -0.3
CXB8/HiAJ m 5865.0 1036.0   3 598.0 0.177 4876.0, 6943.0 -0.51
CXB9/HiAJ m 7603.0 447.0   3 258.0 0.0588 7087.0, 7866.0 -0.34
DBA/2J m 9747.0 3774.0   4 1887.0 0.387 5717.0, 14531.0 -0.13
FVB/NJ m 12331.0 0.0   1   0.0 0.0 12331.0, 12331.0 0.12
I/LnJ m 6000.0 0.0   1   0.0 0.0 6000.0, 6000.0 -0.5
KK/HlJ m 21155.0 0.0   1   0.0 0.0 21155.0, 21155.0 0.98
LG/J m 9342.0 0.0   1   0.0 0.0 9342.0, 9342.0 -0.17
LP/J m 11324.0 0.0   1   0.0 0.0 11324.0, 11324.0 0.02
MA/MyJ m 7850.0 0.0   1   0.0 0.0 7850.0, 7850.0 -0.32
NOD/ShiLtJ m 22990.0 0.0   1   0.0 0.0 22990.0, 22990.0 1.16
NON/ShiLtJ m 6572.0 0.0   1   0.0 0.0 6572.0, 6572.0 -0.44
NZW/LacJ m 5902.0 0.0   1   0.0 0.0 5902.0, 5902.0 -0.51
PL/J m 35705.0 0.0   1   0.0 0.0 35705.0, 35705.0 2.4
RIIIS/J m 6612.0 0.0   1   0.0 0.0 6612.0, 6612.0 -0.44
SEA/GnJ m 10211.0 0.0   1   0.0 0.0 10211.0, 10211.0 -0.09
SJL/J m 8782.0 0.0   1   0.0 0.0 8782.0, 8782.0 -0.23
SM/J m 19146.0 0.0   1   0.0 0.0 19146.0, 19146.0 0.79
SWR/J m 13174.0 0.0   1   0.0 0.0 13174.0, 13174.0 0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 21791.65 5765.9173 33509.4037 10073.8963
AXB19b/PgnJ m 8629.95 5765.9173 20347.7037 0.0
AXB24/PgnJ m 9364.0 5765.9173 21081.7537 0.0
BALB/cJ m 34583.2 4707.8517 44150.7059 25015.6941
BXA16/PgnJ m 5909.8 5765.9173 17627.5537 0.0
BXD19/TyJ m 4164.95 5765.9173 15882.7037 0.0
BXD28/TyJ m 6452.95 5765.9173 18170.7037 0.0
BXH4/TyJ m 9840.05 5765.9173 21557.8037 0.0
C3H/HeJ m 9486.85 5765.9173 21204.6037 0.0
C57BL/6J m 9853.26 3646.6863 17264.2182 2442.3018
CXB11/HiAJ m 7604.05 5765.9173 19321.8037 0.0
CXB12/HiAJ m 8794.55 5765.9173 20512.3037 0.0
CXB13/HiAJ m 7335.3667 4707.8517 16902.8725 0.0
CXB1/ByJ m 6530.0333 4707.8517 16097.5392 0.0
CXB2/ByJ m 9394.5 4707.8517 18962.0059 0.0
CXB3/ByJ m 6752.75 5765.9173 18470.5037 0.0
CXB4/ByJ m 8742.1 5765.9173 20459.8537 0.0
CXB6/ByJ m 11796.8333 4707.8517 21364.3392 2229.3275
CXB7/ByJ m 8081.7 5765.9173 19799.4537 0.0
CXB8/HiAJ m 5864.8333 4707.8517 15432.3392 0.0
CXB9/HiAJ m 7603.3 4707.8517 17170.8059 0.0
DBA/2J m 9746.925 4077.1192 18032.6281 1461.2219




  GWAS USING LINEAR MIXED MODELS