Phenotype measure:   HMDPpheno8   hexadecanedioate

ID, description, units MPD:50333   hexadecanedioate   hexadecanedioate (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - hexadecanedioate (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means21771   None
Median of the strain means19032   None
SD of the strain means± 11015
Coefficient of variation (CV)0.506
Min–max range of strain means6571   –   60081   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 6472587565.2662 308218455.4889 2.1377 0.0236
Residuals 34 4902253599.4322 144183929.3951


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 28005.0 0.0   1   0.0 0.0 28005.0, 28005.0 0.57
A/J m 34549.0 14331.0   2   10134.0 0.415 24415.0, 44683.0 1.16
AKR/J m 20203.0 0.0   1   0.0 0.0 20203.0, 20203.0 -0.14
AXB10/PgnJ m 13142.0 0.0   1   0.0 0.0 13142.0, 13142.0 -0.78
AXB12/PgnJ m 18839.0 0.0   1   0.0 0.0 18839.0, 18839.0 -0.27
AXB13/PgnJ m 18579.0 0.0   1   0.0 0.0 18579.0, 18579.0 -0.29
AXB15/PgnJ m 21990.0 0.0   1   0.0 0.0 21990.0, 21990.0 0.02
AXB19a/PgnJ m 52105.0 0.0   1   0.0 0.0 52105.0, 52105.0 2.75
AXB19b/PgnJ m 33340.0 9176.0   2   6488.0 0.275 26852.0, 39828.0 1.05
AXB19/PgnJ m 34666.0 0.0   1   0.0 0.0 34666.0, 34666.0 1.17
AXB1/PgnJ m 37988.0 0.0   1   0.0 0.0 37988.0, 37988.0 1.47
AXB23/PgnJ m 15641.0 0.0   1   0.0 0.0 15641.0, 15641.0 -0.56
AXB24/PgnJ m 16553.0 883.0   2   624.0 0.0533 15929.0, 17177.0 -0.47
AXB2/PgnJ m 19128.0 0.0   1   0.0 0.0 19128.0, 19128.0 -0.24
AXB4/PgnJ m 40899.0 0.0   1   0.0 0.0 40899.0, 40899.0 1.74
AXB5/PgnJ m 27819.0 0.0   1   0.0 0.0 27819.0, 27819.0 0.55
AXB6/PgnJ m 24962.0 0.0   1   0.0 0.0 24962.0, 24962.0 0.29
AXB8/PgnJ m 12027.0 0.0   1   0.0 0.0 12027.0, 12027.0 -0.88
BALB/cJ m 17322.0 1994.0   3 1151.0 0.115 15420.0, 19396.0 -0.4
BTBR T+ Itpr3tf/J m 21292.0 0.0   1   0.0 0.0 21292.0, 21292.0 -0.04
BUB/BnJ m 18936.0 0.0   1   0.0 0.0 18936.0, 18936.0 -0.26
BXA11/PgnJ m 16453.0 0.0   1   0.0 0.0 16453.0, 16453.0 -0.48
BXA12/PgnJ m 55037.0 0.0   1   0.0 0.0 55037.0, 55037.0 3.02
BXA13/PgnJ m 11707.0 0.0   1   0.0 0.0 11707.0, 11707.0 -0.91
BXA14/PgnJ m 13082.0 0.0   1   0.0 0.0 13082.0, 13082.0 -0.79
BXA16/PgnJ m 33457.0 8813.0   2   6232.0 0.263 27226.0, 39689.0 1.06
BXA1/PgnJ m 13155.0 0.0   1   0.0 0.0 13155.0, 13155.0 -0.78
BXA24/PgnJ m 29064.0 0.0   1   0.0 0.0 29064.0, 29064.0 0.66
BXA25/PgnJ m 7459.0 0.0   1   0.0 0.0 7459.0, 7459.0 -1.3
BXA26/PgnJ m 24295.0 0.0   1   0.0 0.0 24295.0, 24295.0 0.23
BXA2/PgnJ m 15202.0 0.0   1   0.0 0.0 15202.0, 15202.0 -0.6
BXA4/PgnJ m 34977.0 0.0   1   0.0 0.0 34977.0, 34977.0 1.2
BXA7/PgnJ m 20223.0 0.0   1   0.0 0.0 20223.0, 20223.0 -0.14
BXA8/PgnJ m 16842.0 0.0   1   0.0 0.0 16842.0, 16842.0 -0.45
BXD11/TyJ m 14675.0 0.0   1   0.0 0.0 14675.0, 14675.0 -0.64
BXD12/TyJ m 32485.0 0.0   1   0.0 0.0 32485.0, 32485.0 0.97
BXD13/TyJ m 21085.0 0.0   1   0.0 0.0 21085.0, 21085.0 -0.06
BXD14/TyJ m 10115.0 0.0   1   0.0 0.0 10115.0, 10115.0 -1.06
BXD15/TyJ m 13537.0 0.0   1   0.0 0.0 13537.0, 13537.0 -0.75
BXD18/TyJ m 14330.0 0.0   1   0.0 0.0 14330.0, 14330.0 -0.68
BXD19/TyJ m 18073.0 13870.0   2   9808.0 0.767 8265.0, 27880.0 -0.34
BXD1/TyJ m 14881.0 0.0   1   0.0 0.0 14881.0, 14881.0 -0.63
BXD20/TyJ m 36133.0 0.0   1   0.0 0.0 36133.0, 36133.0 1.3
BXD21/TyJ m 32812.0 0.0   1   0.0 0.0 32812.0, 32812.0 1.0
BXD22/TyJ m 34408.0 0.0   1   0.0 0.0 34408.0, 34408.0 1.15
BXD24/TyJ m 27075.0 0.0   1   0.0 0.0 27075.0, 27075.0 0.48
BXD24/TyJ-Cep290rd16/J m 15478.0 0.0   1   0.0 0.0 15478.0, 15478.0 -0.57
BXD28/TyJ m 19591.0 1849.0   2   1307.0 0.0944 18283.0, 20898.0 -0.2
BXD29-Tlr4lps-2J/J m 11213.0 0.0   1   0.0 0.0 11213.0, 11213.0 -0.96
BXD2/TyJ m 17369.0 0.0   1   0.0 0.0 17369.0, 17369.0 -0.4
BXD32/TyJ m 27908.0 0.0   1   0.0 0.0 27908.0, 27908.0 0.56
BXD33/TyJ m 30659.0 0.0   1   0.0 0.0 30659.0, 30659.0 0.81
BXD34/TyJ m 26384.0 0.0   1   0.0 0.0 26384.0, 26384.0 0.42
BXD36/TyJ m 15789.0 0.0   1   0.0 0.0 15789.0, 15789.0 -0.54
BXD38/TyJ m 19528.0 0.0   1   0.0 0.0 19528.0, 19528.0 -0.2
BXD39/TyJ m 12386.0 0.0   1   0.0 0.0 12386.0, 12386.0 -0.85
BXD40/TyJ m 13515.0 0.0   1   0.0 0.0 13515.0, 13515.0 -0.75
BXD42/TyJ m 29184.0 0.0   1   0.0 0.0 29184.0, 29184.0 0.67
BXD5/TyJ m 9895.0 0.0   1   0.0 0.0 9895.0, 9895.0 -1.08
BXD6/TyJ m 33328.0 0.0   1   0.0 0.0 33328.0, 33328.0 1.05
BXD8/TyJ m 54798.0 0.0   1   0.0 0.0 54798.0, 54798.0 3.0
BXD9/TyJ m 11481.0 0.0   1   0.0 0.0 11481.0, 11481.0 -0.93
BXH10/TyJ m 13808.0 0.0   1   0.0 0.0 13808.0, 13808.0 -0.72
BXH19/TyJ m 13544.0 0.0   1   0.0 0.0 13544.0, 13544.0 -0.75
BXH20/KccJ m 13602.0 0.0   1   0.0 0.0 13602.0, 13602.0 -0.74
BXH22/KccJ m 21180.0 0.0   1   0.0 0.0 21180.0, 21180.0 -0.05
BXH2/TyJ m 23112.0 0.0   1   0.0 0.0 23112.0, 23112.0 0.12
BXH4/TyJ m 19536.0 1410.0   2   997.0 0.0722 18539.0, 20533.0 -0.2
BXH6/TyJ m 11944.0 0.0   1   0.0 0.0 11944.0, 11944.0 -0.89
BXH7/TyJ m 16626.0 0.0   1   0.0 0.0 16626.0, 16626.0 -0.47
BXH8/TyJ m 17830.0 0.0   1   0.0 0.0 17830.0, 17830.0 -0.36
BXH9/TyJ m 8540.0 0.0   1   0.0 0.0 8540.0, 8540.0 -1.2
C3H/HeJ m 28033.0 13899.0   2   9828.0 0.496 18205.0, 37861.0 0.57
C57BL/6J m 23084.0 6468.0   5 2893.0 0.28 15164.0, 30772.0 0.12
C57L/J m 23086.0 0.0   1   0.0 0.0 23086.0, 23086.0 0.12
C58/J m 17762.0 0.0   1   0.0 0.0 17762.0, 17762.0 -0.36
CAST/EiJ m 10019.0 0.0   1   0.0 0.0 10019.0, 10019.0 -1.07
CBA/J m 14928.0 0.0   1   0.0 0.0 14928.0, 14928.0 -0.62
CE/J m 18758.0 0.0   1   0.0 0.0 18758.0, 18758.0 -0.27
CXB11/HiAJ m 20170.0 5298.0   2   3746.0 0.263 16424.0, 23916.0 -0.15
CXB12/HiAJ m 60081.0 24528.0   2   17344.0 0.408 42737.0, 77424.0 3.48
CXB13/HiAJ m 40098.0 14552.0   3 8402.0 0.363 23419.0, 50204.0 1.66
CXB1/ByJ m 17645.0 2715.0   3 1568.0 0.154 14510.0, 19221.0 -0.37
CXB2/ByJ m 38790.0 26948.0   3 15558.0 0.695 22528.0, 69895.0 1.55
CXB3/ByJ m 22486.0 6129.0   2   4334.0 0.273 18151.0, 26820.0 0.06
CXB4/ByJ m 30767.0 2714.0   2   1919.0 0.0882 28848.0, 32686.0 0.82
CXB6/ByJ m 22946.0 6023.0   3 3477.0 0.262 18804.0, 29855.0 0.11
CXB7/ByJ m 20740.0 8555.0   2   6049.0 0.412 14691.0, 26790.0 -0.09
CXB8/HiAJ m 42207.0 21382.0   3 12345.0 0.507 23153.0, 65333.0 1.86
CXB9/HiAJ m 22858.0 12942.0   3 7472.0 0.566 13838.0, 37686.0 0.1
DBA/2J m 12597.0 1590.0   4 795.0 0.126 10595.0, 14477.0 -0.83
FVB/NJ m 8724.0 0.0   1   0.0 0.0 8724.0, 8724.0 -1.18
I/LnJ m 20575.0 0.0   1   0.0 0.0 20575.0, 20575.0 -0.11
KK/HlJ m 10277.0 0.0   1   0.0 0.0 10277.0, 10277.0 -1.04
LG/J m 6571.0 0.0   1   0.0 0.0 6571.0, 6571.0 -1.38
LP/J m 41477.0 0.0   1   0.0 0.0 41477.0, 41477.0 1.79
MA/MyJ m 8580.0 0.0   1   0.0 0.0 8580.0, 8580.0 -1.2
NOD/ShiLtJ m 15784.0 0.0   1   0.0 0.0 15784.0, 15784.0 -0.54
NON/ShiLtJ m 21671.0 0.0   1   0.0 0.0 21671.0, 21671.0 -0.01
NZW/LacJ m 11194.0 0.0   1   0.0 0.0 11194.0, 11194.0 -0.96
PL/J m 9769.0 0.0   1   0.0 0.0 9769.0, 9769.0 -1.09
RIIIS/J m 7615.0 0.0   1   0.0 0.0 7615.0, 7615.0 -1.29
SEA/GnJ m 15030.0 0.0   1   0.0 0.0 15030.0, 15030.0 -0.61
SJL/J m 11872.0 0.0   1   0.0 0.0 11872.0, 11872.0 -0.9
SM/J m 12938.0 0.0   1   0.0 0.0 12938.0, 12938.0 -0.8
SWR/J m 21851.0 0.0   1   0.0 0.0 21851.0, 21851.0 0.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 34549.0 8490.6987 51804.1758 17293.8242
AXB19b/PgnJ m 33340.35 8490.6987 50595.5258 16085.1742
AXB24/PgnJ m 16553.0 8490.6987 33808.1758 0.0
BALB/cJ m 17321.9667 6932.6265 31410.7587 3233.1746
BXA16/PgnJ m 33457.3 8490.6987 50712.4758 16202.1242
BXD19/TyJ m 18072.85 8490.6987 35328.0258 817.6742
BXD28/TyJ m 19590.65 8490.6987 36845.8258 2335.4742
BXH4/TyJ m 19536.0 8490.6987 36791.1758 2280.8242
C3H/HeJ m 28032.85 8490.6987 45288.0258 10777.6742
C57BL/6J m 23084.22 5369.9894 33997.3514 12171.0886
CXB11/HiAJ m 20170.05 8490.6987 37425.2258 2914.8742
CXB12/HiAJ m 60080.6 8490.6987 77335.7758 42825.4242
CXB13/HiAJ m 40097.9 6932.6265 54186.6921 26009.1079
CXB1/ByJ m 17644.7333 6932.6265 31733.5254 3555.9413
CXB2/ByJ m 38789.5 6932.6265 52878.2921 24700.7079
CXB3/ByJ m 22485.55 8490.6987 39740.7258 5230.3742
CXB4/ByJ m 30766.6 8490.6987 48021.7758 13511.4242
CXB6/ByJ m 22946.2667 6932.6265 37035.0587 8857.4746
CXB7/ByJ m 20740.3 8490.6987 37995.4758 3485.1242
CXB8/HiAJ m 42207.4333 6932.6265 56296.2254 28118.6413
CXB9/HiAJ m 22857.5 6932.6265 36946.2921 8768.7079
DBA/2J m 12596.575 6003.8306 24797.8269 395.3231




  GWAS USING LINEAR MIXED MODELS