Phenotype measure:   HMDPpheno8   hexanoylglycine

ID, description, units MPD:50328   hexanoylglycine   hexanoylglycine (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - hexanoylglycine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means36060   None
Median of the strain means34508   None
SD of the strain means± 13596
Coefficient of variation (CV)0.377
Min–max range of strain means7123   –   75354   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 6630371237.8361 315731963.7065 2.4129 0.0108
Residuals 34 4449031016.6925 130853853.4321


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 21037.0 0.0   1   0.0 0.0 21037.0, 21037.0 -1.1
A/J m 58917.0 5485.0   2   3879.0 0.0931 55038.0, 62795.0 1.68
AKR/J m 22579.0 0.0   1   0.0 0.0 22579.0, 22579.0 -0.99
AXB10/PgnJ m 38155.0 0.0   1   0.0 0.0 38155.0, 38155.0 0.15
AXB12/PgnJ m 30034.0 0.0   1   0.0 0.0 30034.0, 30034.0 -0.44
AXB13/PgnJ m 38071.0 0.0   1   0.0 0.0 38071.0, 38071.0 0.15
AXB15/PgnJ m 69247.0 0.0   1   0.0 0.0 69247.0, 69247.0 2.44
AXB19a/PgnJ m 66712.0 0.0   1   0.0 0.0 66712.0, 66712.0 2.25
AXB19b/PgnJ m 47508.0 7376.0   2   5216.0 0.155 42292.0, 52724.0 0.84
AXB19/PgnJ m 67425.0 0.0   1   0.0 0.0 67425.0, 67425.0 2.31
AXB1/PgnJ m 32105.0 0.0   1   0.0 0.0 32105.0, 32105.0 -0.29
AXB23/PgnJ m 38908.0 0.0   1   0.0 0.0 38908.0, 38908.0 0.21
AXB24/PgnJ m 28012.0 7821.0   2   5530.0 0.279 22482.0, 33542.0 -0.59
AXB2/PgnJ m 35426.0 0.0   1   0.0 0.0 35426.0, 35426.0 -0.05
AXB4/PgnJ m 52850.0 0.0   1   0.0 0.0 52850.0, 52850.0 1.23
AXB5/PgnJ m 33802.0 0.0   1   0.0 0.0 33802.0, 33802.0 -0.17
AXB6/PgnJ m 53841.0 0.0   1   0.0 0.0 53841.0, 53841.0 1.31
AXB8/PgnJ m 38088.0 0.0   1   0.0 0.0 38088.0, 38088.0 0.15
BALB/cJ m 38574.0 13114.0   3 7571.0 0.34 29165.0, 53553.0 0.18
BTBR T+ Itpr3tf/J m 24696.0 0.0   1   0.0 0.0 24696.0, 24696.0 -0.84
BUB/BnJ m 42074.0 0.0   1   0.0 0.0 42074.0, 42074.0 0.44
BXA11/PgnJ m 33403.0 0.0   1   0.0 0.0 33403.0, 33403.0 -0.2
BXA12/PgnJ m 66256.0 0.0   1   0.0 0.0 66256.0, 66256.0 2.22
BXA13/PgnJ m 38816.0 0.0   1   0.0 0.0 38816.0, 38816.0 0.2
BXA14/PgnJ m 25655.0 0.0   1   0.0 0.0 25655.0, 25655.0 -0.77
BXA16/PgnJ m 40902.0 10547.0   2   7458.0 0.258 33444.0, 48360.0 0.36
BXA1/PgnJ m 30572.0 0.0   1   0.0 0.0 30572.0, 30572.0 -0.4
BXA24/PgnJ m 33444.0 0.0   1   0.0 0.0 33444.0, 33444.0 -0.19
BXA25/PgnJ m 42445.0 0.0   1   0.0 0.0 42445.0, 42445.0 0.47
BXA26/PgnJ m 63172.0 0.0   1   0.0 0.0 63172.0, 63172.0 1.99
BXA2/PgnJ m 25456.0 0.0   1   0.0 0.0 25456.0, 25456.0 -0.78
BXA4/PgnJ m 61209.0 0.0   1   0.0 0.0 61209.0, 61209.0 1.85
BXA7/PgnJ m 30468.0 0.0   1   0.0 0.0 30468.0, 30468.0 -0.41
BXA8/PgnJ m 21623.0 0.0   1   0.0 0.0 21623.0, 21623.0 -1.06
BXD11/TyJ m 29567.0 0.0   1   0.0 0.0 29567.0, 29567.0 -0.48
BXD12/TyJ m 75354.0 0.0   1   0.0 0.0 75354.0, 75354.0 2.89
BXD13/TyJ m 7123.0 0.0   1   0.0 0.0 7123.0, 7123.0 -2.13
BXD14/TyJ m 34110.0 0.0   1   0.0 0.0 34110.0, 34110.0 -0.14
BXD15/TyJ m 29618.0 0.0   1   0.0 0.0 29618.0, 29618.0 -0.47
BXD18/TyJ m 34531.0 0.0   1   0.0 0.0 34531.0, 34531.0 -0.11
BXD19/TyJ m 26901.0 8514.0   2   6020.0 0.316 20880.0, 32921.0 -0.67
BXD1/TyJ m 46061.0 0.0   1   0.0 0.0 46061.0, 46061.0 0.74
BXD20/TyJ m 36022.0 0.0   1   0.0 0.0 36022.0, 36022.0 0.0
BXD21/TyJ m 49257.0 0.0   1   0.0 0.0 49257.0, 49257.0 0.97
BXD22/TyJ m 41932.0 0.0   1   0.0 0.0 41932.0, 41932.0 0.43
BXD24/TyJ m 26950.0 0.0   1   0.0 0.0 26950.0, 26950.0 -0.67
BXD24/TyJ-Cep290rd16/J m 15734.0 0.0   1   0.0 0.0 15734.0, 15734.0 -1.49
BXD28/TyJ m 22076.0 3278.0   2   2318.0 0.148 19759.0, 24394.0 -1.03
BXD29-Tlr4lps-2J/J m 39765.0 0.0   1   0.0 0.0 39765.0, 39765.0 0.27
BXD2/TyJ m 25672.0 0.0   1   0.0 0.0 25672.0, 25672.0 -0.76
BXD32/TyJ m 45116.0 0.0   1   0.0 0.0 45116.0, 45116.0 0.67
BXD33/TyJ m 34180.0 0.0   1   0.0 0.0 34180.0, 34180.0 -0.14
BXD34/TyJ m 16611.0 0.0   1   0.0 0.0 16611.0, 16611.0 -1.43
BXD36/TyJ m 21218.0 0.0   1   0.0 0.0 21218.0, 21218.0 -1.09
BXD38/TyJ m 35056.0 0.0   1   0.0 0.0 35056.0, 35056.0 -0.07
BXD39/TyJ m 38089.0 0.0   1   0.0 0.0 38089.0, 38089.0 0.15
BXD40/TyJ m 35230.0 0.0   1   0.0 0.0 35230.0, 35230.0 -0.06
BXD42/TyJ m 37880.0 0.0   1   0.0 0.0 37880.0, 37880.0 0.13
BXD5/TyJ m 30626.0 0.0   1   0.0 0.0 30626.0, 30626.0 -0.4
BXD6/TyJ m 27118.0 0.0   1   0.0 0.0 27118.0, 27118.0 -0.66
BXD8/TyJ m 44522.0 0.0   1   0.0 0.0 44522.0, 44522.0 0.62
BXD9/TyJ m 22335.0 0.0   1   0.0 0.0 22335.0, 22335.0 -1.01
BXH10/TyJ m 32626.0 0.0   1   0.0 0.0 32626.0, 32626.0 -0.25
BXH19/TyJ m 64089.0 0.0   1   0.0 0.0 64089.0, 64089.0 2.06
BXH20/KccJ m 41486.0 0.0   1   0.0 0.0 41486.0, 41486.0 0.4
BXH22/KccJ m 38150.0 0.0   1   0.0 0.0 38150.0, 38150.0 0.15
BXH2/TyJ m 52459.0 0.0   1   0.0 0.0 52459.0, 52459.0 1.21
BXH4/TyJ m 49669.0 12699.0   2   8980.0 0.256 40689.0, 58649.0 1.0
BXH6/TyJ m 41327.0 0.0   1   0.0 0.0 41327.0, 41327.0 0.39
BXH7/TyJ m 17308.0 0.0   1   0.0 0.0 17308.0, 17308.0 -1.38
BXH8/TyJ m 35632.0 0.0   1   0.0 0.0 35632.0, 35632.0 -0.03
BXH9/TyJ m 31695.0 0.0   1   0.0 0.0 31695.0, 31695.0 -0.32
C3H/HeJ m 41667.0 28509.0   2   20159.0 0.684 21508.0, 61826.0 0.41
C57BL/6J m 57837.0 5040.0   5 2254.0 0.0871 50782.0, 64162.0 1.6
C57L/J m 38347.0 0.0   1   0.0 0.0 38347.0, 38347.0 0.17
C58/J m 23082.0 0.0   1   0.0 0.0 23082.0, 23082.0 -0.95
CAST/EiJ m 23610.0 0.0   1   0.0 0.0 23610.0, 23610.0 -0.92
CBA/J m 15659.0 0.0   1   0.0 0.0 15659.0, 15659.0 -1.5
CE/J m 28630.0 0.0   1   0.0 0.0 28630.0, 28630.0 -0.55
CXB11/HiAJ m 29331.0 14274.0   2   10093.0 0.487 19238.0, 39425.0 -0.49
CXB12/HiAJ m 47870.0 4793.0   2   3389.0 0.1 44481.0, 51260.0 0.87
CXB13/HiAJ m 34486.0 5913.0   3 3414.0 0.171 29864.0, 41150.0 -0.12
CXB1/ByJ m 31062.0 6678.0   3 3856.0 0.215 23354.0, 35126.0 -0.37
CXB2/ByJ m 48050.0 27497.0   3 15876.0 0.572 22083.0, 76857.0 0.88
CXB3/ByJ m 57437.0 11106.0   2   7853.0 0.193 49584.0, 65290.0 1.57
CXB4/ByJ m 19508.0 239.0   2   169.0 0.0123 19339.0, 19678.0 -1.22
CXB6/ByJ m 40945.0 2053.0   3 1185.0 0.0501 39056.0, 43129.0 0.36
CXB7/ByJ m 43134.0 12908.0   2   9128.0 0.299 34006.0, 52261.0 0.52
CXB8/HiAJ m 36640.0 9825.0   3 5672.0 0.268 30057.0, 47933.0 0.04
CXB9/HiAJ m 31476.0 5183.0   3 2993.0 0.165 25764.0, 35880.0 -0.34
DBA/2J m 34099.0 9056.0   4 4528.0 0.266 27331.0, 46841.0 -0.14
FVB/NJ m 23772.0 0.0   1   0.0 0.0 23772.0, 23772.0 -0.9
I/LnJ m 33810.0 0.0   1   0.0 0.0 33810.0, 33810.0 -0.17
KK/HlJ m 17937.0 0.0   1   0.0 0.0 17937.0, 17937.0 -1.33
LG/J m 17754.0 0.0   1   0.0 0.0 17754.0, 17754.0 -1.35
LP/J m 25306.0 0.0   1   0.0 0.0 25306.0, 25306.0 -0.79
MA/MyJ m 17211.0 0.0   1   0.0 0.0 17211.0, 17211.0 -1.39
NOD/ShiLtJ m 42539.0 0.0   1   0.0 0.0 42539.0, 42539.0 0.48
NON/ShiLtJ m 41656.0 0.0   1   0.0 0.0 41656.0, 41656.0 0.41
NZW/LacJ m 24470.0 0.0   1   0.0 0.0 24470.0, 24470.0 -0.85
PL/J m 17905.0 0.0   1   0.0 0.0 17905.0, 17905.0 -1.34
RIIIS/J m 48001.0 0.0   1   0.0 0.0 48001.0, 48001.0 0.88
SEA/GnJ m 24952.0 0.0   1   0.0 0.0 24952.0, 24952.0 -0.82
SJL/J m 37782.0 0.0   1   0.0 0.0 37782.0, 37782.0 0.13
SM/J m 14409.0 0.0   1   0.0 0.0 14409.0, 14409.0 -1.59
SWR/J m 27396.0 0.0   1   0.0 0.0 27396.0, 27396.0 -0.64


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 58916.75 8088.6913 75354.9485 42478.5515
AXB19b/PgnJ m 47508.0 8088.6913 63946.1985 31069.8015
AXB24/PgnJ m 28012.25 8088.6913 44450.4485 11574.0515
BALB/cJ m 38573.8 6604.3888 51995.5328 25152.0672
BXA16/PgnJ m 40901.85 8088.6913 57340.0485 24463.6515
BXD19/TyJ m 26900.8 8088.6913 43338.9985 10462.6015
BXD28/TyJ m 22076.4 8088.6913 38514.5985 5638.2015
BXH4/TyJ m 49669.1 8088.6913 66107.2985 33230.9015
C3H/HeJ m 41666.85 8088.6913 58105.0485 25228.6515
C57BL/6J m 57837.0 5115.7376 68233.4295 47440.5705
CXB11/HiAJ m 29331.3 8088.6913 45769.4985 12893.1015
CXB12/HiAJ m 47870.35 8088.6913 64308.5485 31432.1515
CXB13/HiAJ m 34486.2667 6604.3888 47907.9995 21064.5338
CXB1/ByJ m 31061.6333 6604.3888 44483.3662 17639.9005
CXB2/ByJ m 48049.5333 6604.3888 61471.2662 34627.8005
CXB3/ByJ m 57437.1 8088.6913 73875.2985 40998.9015
CXB4/ByJ m 19508.3 8088.6913 35946.4985 3070.1015
CXB6/ByJ m 40945.3333 6604.3888 54367.0662 27523.6005
CXB7/ByJ m 43133.5 8088.6913 59571.6985 26695.3015
CXB8/HiAJ m 36639.6333 6604.3888 50061.3662 23217.9005
CXB9/HiAJ m 31475.7333 6604.3888 44897.4662 18054.0005
DBA/2J m 34098.825 5719.5685 45722.3866 22475.2634




  GWAS USING LINEAR MIXED MODELS