Phenotype measure:   HMDPpheno8   valerylglycine

ID, description, units MPD:50327   valerylglycine   valerylglycine (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - valerylglycine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means135437   None
Median of the strain means130722   None
SD of the strain means± 58092
Coefficient of variation (CV)0.429
Min–max range of strain means41281   –   316328   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 175145624043.186 8340267811.5803 4.3189 0.0001
Residuals 34 65657425551.8079 1931100751.5238


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 148336.0 0.0   1   0.0 0.0 148336.0, 148336.0 0.22
A/J m 159560.0 66720.0   2   47178.0 0.418 112382.0, 206738.0 0.42
AKR/J m 70760.0 0.0   1   0.0 0.0 70760.0, 70760.0 -1.11
AXB10/PgnJ m 137630.0 0.0   1   0.0 0.0 137630.0, 137630.0 0.04
AXB12/PgnJ m 95566.0 0.0   1   0.0 0.0 95566.0, 95566.0 -0.69
AXB13/PgnJ m 207975.0 0.0   1   0.0 0.0 207975.0, 207975.0 1.25
AXB15/PgnJ m 151152.0 0.0   1   0.0 0.0 151152.0, 151152.0 0.27
AXB19a/PgnJ m 162300.0 0.0   1   0.0 0.0 162300.0, 162300.0 0.46
AXB19b/PgnJ m 142696.0 36993.0   2   26158.0 0.259 116538.0, 168854.0 0.12
AXB19/PgnJ m 130652.0 0.0   1   0.0 0.0 130652.0, 130652.0 -0.08
AXB1/PgnJ m 109886.0 0.0   1   0.0 0.0 109886.0, 109886.0 -0.44
AXB23/PgnJ m 139603.0 0.0   1   0.0 0.0 139603.0, 139603.0 0.07
AXB24/PgnJ m 165858.0 8745.0   2   6184.0 0.0527 159674.0, 172041.0 0.52
AXB2/PgnJ m 130793.0 0.0   1   0.0 0.0 130793.0, 130793.0 -0.08
AXB4/PgnJ m 132778.0 0.0   1   0.0 0.0 132778.0, 132778.0 -0.05
AXB5/PgnJ m 157239.0 0.0   1   0.0 0.0 157239.0, 157239.0 0.38
AXB6/PgnJ m 133018.0 0.0   1   0.0 0.0 133018.0, 133018.0 -0.04
AXB8/PgnJ m 302084.0 0.0   1   0.0 0.0 302084.0, 302084.0 2.87
BALB/cJ m 157571.0 47556.0   3 27457.0 0.302 125725.0, 212236.0 0.38
BTBR T+ Itpr3tf/J m 80464.0 0.0   1   0.0 0.0 80464.0, 80464.0 -0.95
BUB/BnJ m 252365.0 0.0   1   0.0 0.0 252365.0, 252365.0 2.01
BXA11/PgnJ m 128070.0 0.0   1   0.0 0.0 128070.0, 128070.0 -0.13
BXA12/PgnJ m 143300.0 0.0   1   0.0 0.0 143300.0, 143300.0 0.14
BXA13/PgnJ m 220020.0 0.0   1   0.0 0.0 220020.0, 220020.0 1.46
BXA14/PgnJ m 183873.0 0.0   1   0.0 0.0 183873.0, 183873.0 0.83
BXA16/PgnJ m 153364.0 9359.0   2   6618.0 0.061 146746.0, 159981.0 0.31
BXA1/PgnJ m 207404.0 0.0   1   0.0 0.0 207404.0, 207404.0 1.24
BXA24/PgnJ m 247748.0 0.0   1   0.0 0.0 247748.0, 247748.0 1.93
BXA25/PgnJ m 91556.0 0.0   1   0.0 0.0 91556.0, 91556.0 -0.76
BXA26/PgnJ m 182599.0 0.0   1   0.0 0.0 182599.0, 182599.0 0.81
BXA2/PgnJ m 112331.0 0.0   1   0.0 0.0 112331.0, 112331.0 -0.4
BXA4/PgnJ m 139856.0 0.0   1   0.0 0.0 139856.0, 139856.0 0.08
BXA7/PgnJ m 83034.0 0.0   1   0.0 0.0 83034.0, 83034.0 -0.9
BXA8/PgnJ m 157496.0 0.0   1   0.0 0.0 157496.0, 157496.0 0.38
BXD11/TyJ m 85203.0 0.0   1   0.0 0.0 85203.0, 85203.0 -0.86
BXD12/TyJ m 93653.0 0.0   1   0.0 0.0 93653.0, 93653.0 -0.72
BXD13/TyJ m 52811.0 0.0   1   0.0 0.0 52811.0, 52811.0 -1.42
BXD14/TyJ m 157716.0 0.0   1   0.0 0.0 157716.0, 157716.0 0.38
BXD15/TyJ m 120807.0 0.0   1   0.0 0.0 120807.0, 120807.0 -0.25
BXD18/TyJ m 116110.0 0.0   1   0.0 0.0 116110.0, 116110.0 -0.33
BXD19/TyJ m 153660.0 92316.0   2   65278.0 0.601 88382.0, 218937.0 0.31
BXD1/TyJ m 90468.0 0.0   1   0.0 0.0 90468.0, 90468.0 -0.77
BXD20/TyJ m 68824.0 0.0   1   0.0 0.0 68824.0, 68824.0 -1.15
BXD21/TyJ m 141730.0 0.0   1   0.0 0.0 141730.0, 141730.0 0.11
BXD22/TyJ m 103902.0 0.0   1   0.0 0.0 103902.0, 103902.0 -0.54
BXD24/TyJ m 119681.0 0.0   1   0.0 0.0 119681.0, 119681.0 -0.27
BXD24/TyJ-Cep290rd16/J m 69026.0 0.0   1   0.0 0.0 69026.0, 69026.0 -1.14
BXD28/TyJ m 91930.0 26123.0   2   18472.0 0.284 73458.0, 110402.0 -0.75
BXD29-Tlr4lps-2J/J m 137647.0 0.0   1   0.0 0.0 137647.0, 137647.0 0.04
BXD2/TyJ m 101652.0 0.0   1   0.0 0.0 101652.0, 101652.0 -0.58
BXD32/TyJ m 135156.0 0.0   1   0.0 0.0 135156.0, 135156.0 0.0
BXD33/TyJ m 125684.0 0.0   1   0.0 0.0 125684.0, 125684.0 -0.17
BXD34/TyJ m 70137.0 0.0   1   0.0 0.0 70137.0, 70137.0 -1.12
BXD36/TyJ m 50170.0 0.0   1   0.0 0.0 50170.0, 50170.0 -1.47
BXD38/TyJ m 171814.0 0.0   1   0.0 0.0 171814.0, 171814.0 0.63
BXD39/TyJ m 84524.0 0.0   1   0.0 0.0 84524.0, 84524.0 -0.88
BXD40/TyJ m 121652.0 0.0   1   0.0 0.0 121652.0, 121652.0 -0.24
BXD42/TyJ m 85356.0 0.0   1   0.0 0.0 85356.0, 85356.0 -0.86
BXD5/TyJ m 186217.0 0.0   1   0.0 0.0 186217.0, 186217.0 0.87
BXD6/TyJ m 71201.0 0.0   1   0.0 0.0 71201.0, 71201.0 -1.11
BXD8/TyJ m 89002.0 0.0   1   0.0 0.0 89002.0, 89002.0 -0.8
BXD9/TyJ m 104356.0 0.0   1   0.0 0.0 104356.0, 104356.0 -0.54
BXH10/TyJ m 178583.0 0.0   1   0.0 0.0 178583.0, 178583.0 0.74
BXH19/TyJ m 56775.0 0.0   1   0.0 0.0 56775.0, 56775.0 -1.35
BXH20/KccJ m 122340.0 0.0   1   0.0 0.0 122340.0, 122340.0 -0.23
BXH22/KccJ m 61844.0 0.0   1   0.0 0.0 61844.0, 61844.0 -1.27
BXH2/TyJ m 82382.0 0.0   1   0.0 0.0 82382.0, 82382.0 -0.91
BXH4/TyJ m 86461.0 26199.0   2   18525.0 0.303 67935.0, 104986.0 -0.84
BXH6/TyJ m 128922.0 0.0   1   0.0 0.0 128922.0, 128922.0 -0.11
BXH7/TyJ m 56646.0 0.0   1   0.0 0.0 56646.0, 56646.0 -1.36
BXH8/TyJ m 170244.0 0.0   1   0.0 0.0 170244.0, 170244.0 0.6
BXH9/TyJ m 123123.0 0.0   1   0.0 0.0 123123.0, 123123.0 -0.21
C3H/HeJ m 93729.0 12330.0   2   8719.0 0.132 85010.0, 102448.0 -0.72
C57BL/6J m 202485.0 60321.0   5 26976.0 0.298 138588.0, 272572.0 1.15
C57L/J m 51943.0 0.0   1   0.0 0.0 51943.0, 51943.0 -1.44
C58/J m 95869.0 0.0   1   0.0 0.0 95869.0, 95869.0 -0.68
CAST/EiJ m 87981.0 0.0   1   0.0 0.0 87981.0, 87981.0 -0.82
CBA/J m 62602.0 0.0   1   0.0 0.0 62602.0, 62602.0 -1.25
CE/J m 137225.0 0.0   1   0.0 0.0 137225.0, 137225.0 0.03
CXB11/HiAJ m 182851.0 8637.0   2   6107.0 0.0472 176744.0, 188959.0 0.82
CXB12/HiAJ m 142807.0 57391.0   2   40582.0 0.402 102226.0, 183389.0 0.13
CXB13/HiAJ m 236639.0 52545.0   3 30337.0 0.222 204042.0, 297255.0 1.74
CXB1/ByJ m 220240.0 14470.0   3 8354.0 0.0657 203872.0, 231333.0 1.46
CXB2/ByJ m 214047.0 28054.0   3 16197.0 0.131 186483.0, 242566.0 1.35
CXB3/ByJ m 316328.0 85146.0   2   60208.0 0.269 256120.0, 376536.0 3.11
CXB4/ByJ m 179972.0 80970.0   2   57254.0 0.45 122718.0, 237227.0 0.77
CXB6/ByJ m 213427.0 10178.0   3 5876.0 0.0477 204286.0, 224394.0 1.34
CXB7/ByJ m 160519.0 23934.0   2   16924.0 0.149 143594.0, 177443.0 0.43
CXB8/HiAJ m 256080.0 9125.0   3 5268.0 0.0356 249059.0, 266394.0 2.08
CXB9/HiAJ m 268087.0 47324.0   3 27323.0 0.177 213765.0, 300392.0 2.28
DBA/2J m 120324.0 12079.0   4 6040.0 0.1 109586.0, 131097.0 -0.26
FVB/NJ m 145679.0 0.0   1   0.0 0.0 145679.0, 145679.0 0.18
I/LnJ m 152806.0 0.0   1   0.0 0.0 152806.0, 152806.0 0.3
KK/HlJ m 129896.0 0.0   1   0.0 0.0 129896.0, 129896.0 -0.1
LG/J m 59209.0 0.0   1   0.0 0.0 59209.0, 59209.0 -1.31
LP/J m 94251.0 0.0   1   0.0 0.0 94251.0, 94251.0 -0.71
MA/MyJ m 61224.0 0.0   1   0.0 0.0 61224.0, 61224.0 -1.28
NOD/ShiLtJ m 170100.0 0.0   1   0.0 0.0 170100.0, 170100.0 0.6
NON/ShiLtJ m 288082.0 0.0   1   0.0 0.0 288082.0, 288082.0 2.63
NZW/LacJ m 92059.0 0.0   1   0.0 0.0 92059.0, 92059.0 -0.75
PL/J m 139363.0 0.0   1   0.0 0.0 139363.0, 139363.0 0.07
RIIIS/J m 41281.0 0.0   1   0.0 0.0 41281.0, 41281.0 -1.62
SEA/GnJ m 114495.0 0.0   1   0.0 0.0 114495.0, 114495.0 -0.36
SJL/J m 74393.0 0.0   1   0.0 0.0 74393.0, 74393.0 -1.05
SM/J m 103776.0 0.0   1   0.0 0.0 103776.0, 103776.0 -0.55
SWR/J m 160177.0 0.0   1   0.0 0.0 160177.0, 160177.0 0.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 159559.65 31073.3065 222708.2065 96411.0935
AXB19b/PgnJ m 142696.05 31073.3065 205844.6065 79547.4935
AXB24/PgnJ m 165857.6 31073.3065 229006.1565 102709.0435
BALB/cJ m 157570.9333 25371.2485 209131.5138 106010.3529
BXA16/PgnJ m 153363.75 31073.3065 216512.3065 90215.1935
BXD19/TyJ m 153659.65 31073.3065 216808.2065 90511.0935
BXD28/TyJ m 91930.25 31073.3065 155078.8065 28781.6935
BXH4/TyJ m 86460.75 31073.3065 149609.3065 23312.1935
C3H/HeJ m 93729.25 31073.3065 156877.8065 30580.6935
C57BL/6J m 202485.34 19652.4846 242423.9939 162546.6861
CXB11/HiAJ m 182851.35 31073.3065 245999.9065 119702.7935
CXB12/HiAJ m 142807.45 31073.3065 205956.0065 79658.8935
CXB13/HiAJ m 236639.1 25371.2485 288199.6805 185078.5195
CXB1/ByJ m 220239.9667 25371.2485 271800.5471 168679.3862
CXB2/ByJ m 214046.8667 25371.2485 265607.4471 162486.2862
CXB3/ByJ m 316327.95 31073.3065 379476.5065 253179.3935
CXB4/ByJ m 179972.45 31073.3065 243121.0065 116823.8935
CXB6/ByJ m 213427.1 25371.2485 264987.6805 161866.5195
CXB7/ByJ m 160518.6 31073.3065 223667.1565 97370.0435
CXB8/HiAJ m 256079.6333 25371.2485 307640.2138 204519.0529
CXB9/HiAJ m 268086.5667 25371.2485 319647.1471 216525.9862
DBA/2J m 120323.675 21972.1457 164976.4475 75670.9025




  GWAS USING LINEAR MIXED MODELS