Project measure / variable:   HMDPpheno8   valerylglycine

ID, description, units MPD:50327   valerylglycine   valerylglycine (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - valerylglycine (16h fast), relative abundance

CXB3/ByJAXB8/PgnJNON/ShiLtJCXB9/HiAJCXB8/HiAJBUB/BnJBXA24/PgnJCXB13/HiAJCXB1/ByJBXA13/PgnJCXB2/ByJCXB6/ByJAXB13/PgnJBXA1/PgnJC57BL/6JBXD5/TyJBXA14/PgnJCXB11/HiAJBXA26/PgnJCXB4/ByJBXH10/TyJBXD38/TyJBXH8/TyJNOD/ShiLtJAXB24/PgnJAXB19a/PgnJCXB7/ByJSWR/JA/JBXD14/TyJBALB/cJBXA8/PgnJAXB5/PgnJBXD19/TyJBXA16/PgnJI/LnJAXB15/PgnJ129X1/SvJFVB/NJBXA12/PgnJCXB12/HiAJAXB19b/PgnJBXD21/TyJBXA4/PgnJAXB23/PgnJPL/JBXD29-Tlr4<lps-2J>/JAXB10/PgnJCE/JBXD32/TyJAXB6/PgnJAXB4/PgnJAXB2/PgnJAXB19/PgnJKK/HlJBXH6/TyJBXA11/PgnJBXD33/TyJBXH9/TyJBXH20/KccJBXD40/TyJBXD15/TyJDBA/2JBXD24/TyJBXD18/TyJSEA/GnJBXA2/PgnJAXB1/PgnJBXD9/TyJBXD22/TyJSM/JBXD2/TyJC58/JAXB12/PgnJLP/JC3H/HeJBXD12/TyJNZW/LacJBXD28/TyJBXA25/PgnJBXD1/TyJBXD8/TyJCAST/EiJBXH4/TyJBXD42/TyJBXD11/TyJBXD39/TyJBXA7/PgnJBXH2/TyJBTBR T<+> Itpr3<tf>/JSJL/JBXD6/TyJAKR/JBXD34/TyJBXD24/TyJ-Cep290<rd16>/JBXD20/TyJCBA/JBXH22/KccJMA/MyJLG/JBXH19/TyJBXH7/TyJBXD13/TyJC57L/JBXD36/TyJRIIIS/J (no units) 50,000100,000150,000200,000250,000300,000350,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means135437   None
Median of the strain means130722   None
SD of the strain means± 58092
Coefficient of variation (CV)0.429
Min–max range of strain means41281   –   316328   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 175145624043.186 8340267811.5803 4.3189 0.0001
Residuals 34 65657425551.8079 1931100751.5238


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 148336.0 0.0   1   0.0 0.0 148336.0, 148336.0 0.22
A/J m 159560.0 66720.0   2   47178.0 0.418 112382.0, 206738.0 0.42
AKR/J m 70760.0 0.0   1   0.0 0.0 70760.0, 70760.0 -1.11
AXB10/PgnJ m 137630.0 0.0   1   0.0 0.0 137630.0, 137630.0 0.04
AXB12/PgnJ m 95566.0 0.0   1   0.0 0.0 95566.0, 95566.0 -0.69
AXB13/PgnJ m 207975.0 0.0   1   0.0 0.0 207975.0, 207975.0 1.25
AXB15/PgnJ m 151152.0 0.0   1   0.0 0.0 151152.0, 151152.0 0.27
AXB19a/PgnJ m 162300.0 0.0   1   0.0 0.0 162300.0, 162300.0 0.46
AXB19b/PgnJ m 142696.0 36993.0   2   26158.0 0.259 116538.0, 168854.0 0.12
AXB19/PgnJ m 130652.0 0.0   1   0.0 0.0 130652.0, 130652.0 -0.08
AXB1/PgnJ m 109886.0 0.0   1   0.0 0.0 109886.0, 109886.0 -0.44
AXB23/PgnJ m 139603.0 0.0   1   0.0 0.0 139603.0, 139603.0 0.07
AXB24/PgnJ m 165858.0 8745.0   2   6184.0 0.0527 159674.0, 172041.0 0.52
AXB2/PgnJ m 130793.0 0.0   1   0.0 0.0 130793.0, 130793.0 -0.08
AXB4/PgnJ m 132778.0 0.0   1   0.0 0.0 132778.0, 132778.0 -0.05
AXB5/PgnJ m 157239.0 0.0   1   0.0 0.0 157239.0, 157239.0 0.38
AXB6/PgnJ m 133018.0 0.0   1   0.0 0.0 133018.0, 133018.0 -0.04
AXB8/PgnJ m 302084.0 0.0   1   0.0 0.0 302084.0, 302084.0 2.87
BALB/cJ m 157571.0 47556.0   3 27457.0 0.302 125725.0, 212236.0 0.38
BTBR T+ Itpr3tf/J m 80464.0 0.0   1   0.0 0.0 80464.0, 80464.0 -0.95
BUB/BnJ m 252365.0 0.0   1   0.0 0.0 252365.0, 252365.0 2.01
BXA11/PgnJ m 128070.0 0.0   1   0.0 0.0 128070.0, 128070.0 -0.13
BXA12/PgnJ m 143300.0 0.0   1   0.0 0.0 143300.0, 143300.0 0.14
BXA13/PgnJ m 220020.0 0.0   1   0.0 0.0 220020.0, 220020.0 1.46
BXA14/PgnJ m 183873.0 0.0   1   0.0 0.0 183873.0, 183873.0 0.83
BXA16/PgnJ m 153364.0 9359.0   2   6618.0 0.061 146746.0, 159981.0 0.31
BXA1/PgnJ m 207404.0 0.0   1   0.0 0.0 207404.0, 207404.0 1.24
BXA24/PgnJ m 247748.0 0.0   1   0.0 0.0 247748.0, 247748.0 1.93
BXA25/PgnJ m 91556.0 0.0   1   0.0 0.0 91556.0, 91556.0 -0.76
BXA26/PgnJ m 182599.0 0.0   1   0.0 0.0 182599.0, 182599.0 0.81
BXA2/PgnJ m 112331.0 0.0   1   0.0 0.0 112331.0, 112331.0 -0.4
BXA4/PgnJ m 139856.0 0.0   1   0.0 0.0 139856.0, 139856.0 0.08
BXA7/PgnJ m 83034.0 0.0   1   0.0 0.0 83034.0, 83034.0 -0.9
BXA8/PgnJ m 157496.0 0.0   1   0.0 0.0 157496.0, 157496.0 0.38
BXD11/TyJ m 85203.0 0.0   1   0.0 0.0 85203.0, 85203.0 -0.86
BXD12/TyJ m 93653.0 0.0   1   0.0 0.0 93653.0, 93653.0 -0.72
BXD13/TyJ m 52811.0 0.0   1   0.0 0.0 52811.0, 52811.0 -1.42
BXD14/TyJ m 157716.0 0.0   1   0.0 0.0 157716.0, 157716.0 0.38
BXD15/TyJ m 120807.0 0.0   1   0.0 0.0 120807.0, 120807.0 -0.25
BXD18/TyJ m 116110.0 0.0   1   0.0 0.0 116110.0, 116110.0 -0.33
BXD19/TyJ m 153660.0 92316.0   2   65278.0 0.601 88382.0, 218937.0 0.31
BXD1/TyJ m 90468.0 0.0   1   0.0 0.0 90468.0, 90468.0 -0.77
BXD20/TyJ m 68824.0 0.0   1   0.0 0.0 68824.0, 68824.0 -1.15
BXD21/TyJ m 141730.0 0.0   1   0.0 0.0 141730.0, 141730.0 0.11
BXD22/TyJ m 103902.0 0.0   1   0.0 0.0 103902.0, 103902.0 -0.54
BXD24/TyJ m 119681.0 0.0   1   0.0 0.0 119681.0, 119681.0 -0.27
BXD24/TyJ-Cep290rd16/J m 69026.0 0.0   1   0.0 0.0 69026.0, 69026.0 -1.14
BXD28/TyJ m 91930.0 26123.0   2   18472.0 0.284 73458.0, 110402.0 -0.75
BXD29-Tlr4lps-2J/J m 137647.0 0.0   1   0.0 0.0 137647.0, 137647.0 0.04
BXD2/TyJ m 101652.0 0.0   1   0.0 0.0 101652.0, 101652.0 -0.58
BXD32/TyJ m 135156.0 0.0   1   0.0 0.0 135156.0, 135156.0 0.0
BXD33/TyJ m 125684.0 0.0   1   0.0 0.0 125684.0, 125684.0 -0.17
BXD34/TyJ m 70137.0 0.0   1   0.0 0.0 70137.0, 70137.0 -1.12
BXD36/TyJ m 50170.0 0.0   1   0.0 0.0 50170.0, 50170.0 -1.47
BXD38/TyJ m 171814.0 0.0   1   0.0 0.0 171814.0, 171814.0 0.63
BXD39/TyJ m 84524.0 0.0   1   0.0 0.0 84524.0, 84524.0 -0.88
BXD40/TyJ m 121652.0 0.0   1   0.0 0.0 121652.0, 121652.0 -0.24
BXD42/TyJ m 85356.0 0.0   1   0.0 0.0 85356.0, 85356.0 -0.86
BXD5/TyJ m 186217.0 0.0   1   0.0 0.0 186217.0, 186217.0 0.87
BXD6/TyJ m 71201.0 0.0   1   0.0 0.0 71201.0, 71201.0 -1.11
BXD8/TyJ m 89002.0 0.0   1   0.0 0.0 89002.0, 89002.0 -0.8
BXD9/TyJ m 104356.0 0.0   1   0.0 0.0 104356.0, 104356.0 -0.54
BXH10/TyJ m 178583.0 0.0   1   0.0 0.0 178583.0, 178583.0 0.74
BXH19/TyJ m 56775.0 0.0   1   0.0 0.0 56775.0, 56775.0 -1.35
BXH20/KccJ m 122340.0 0.0   1   0.0 0.0 122340.0, 122340.0 -0.23
BXH22/KccJ m 61844.0 0.0   1   0.0 0.0 61844.0, 61844.0 -1.27
BXH2/TyJ m 82382.0 0.0   1   0.0 0.0 82382.0, 82382.0 -0.91
BXH4/TyJ m 86461.0 26199.0   2   18525.0 0.303 67935.0, 104986.0 -0.84
BXH6/TyJ m 128922.0 0.0   1   0.0 0.0 128922.0, 128922.0 -0.11
BXH7/TyJ m 56646.0 0.0   1   0.0 0.0 56646.0, 56646.0 -1.36
BXH8/TyJ m 170244.0 0.0   1   0.0 0.0 170244.0, 170244.0 0.6
BXH9/TyJ m 123123.0 0.0   1   0.0 0.0 123123.0, 123123.0 -0.21
C3H/HeJ m 93729.0 12330.0   2   8719.0 0.132 85010.0, 102448.0 -0.72
C57BL/6J m 202485.0 60321.0   5 26976.0 0.298 138588.0, 272572.0 1.15
C57L/J m 51943.0 0.0   1   0.0 0.0 51943.0, 51943.0 -1.44
C58/J m 95869.0 0.0   1   0.0 0.0 95869.0, 95869.0 -0.68
CAST/EiJ m 87981.0 0.0   1   0.0 0.0 87981.0, 87981.0 -0.82
CBA/J m 62602.0 0.0   1   0.0 0.0 62602.0, 62602.0 -1.25
CE/J m 137225.0 0.0   1   0.0 0.0 137225.0, 137225.0 0.03
CXB11/HiAJ m 182851.0 8637.0   2   6107.0 0.0472 176744.0, 188959.0 0.82
CXB12/HiAJ m 142807.0 57391.0   2   40582.0 0.402 102226.0, 183389.0 0.13
CXB13/HiAJ m 236639.0 52545.0   3 30337.0 0.222 204042.0, 297255.0 1.74
CXB1/ByJ m 220240.0 14470.0   3 8354.0 0.0657 203872.0, 231333.0 1.46
CXB2/ByJ m 214047.0 28054.0   3 16197.0 0.131 186483.0, 242566.0 1.35
CXB3/ByJ m 316328.0 85146.0   2   60208.0 0.269 256120.0, 376536.0 3.11
CXB4/ByJ m 179972.0 80970.0   2   57254.0 0.45 122718.0, 237227.0 0.77
CXB6/ByJ m 213427.0 10178.0   3 5876.0 0.0477 204286.0, 224394.0 1.34
CXB7/ByJ m 160519.0 23934.0   2   16924.0 0.149 143594.0, 177443.0 0.43
CXB8/HiAJ m 256080.0 9125.0   3 5268.0 0.0356 249059.0, 266394.0 2.08
CXB9/HiAJ m 268087.0 47324.0   3 27323.0 0.177 213765.0, 300392.0 2.28
DBA/2J m 120324.0 12079.0   4 6040.0 0.1 109586.0, 131097.0 -0.26
FVB/NJ m 145679.0 0.0   1   0.0 0.0 145679.0, 145679.0 0.18
I/LnJ m 152806.0 0.0   1   0.0 0.0 152806.0, 152806.0 0.3
KK/HlJ m 129896.0 0.0   1   0.0 0.0 129896.0, 129896.0 -0.1
LG/J m 59209.0 0.0   1   0.0 0.0 59209.0, 59209.0 -1.31
LP/J m 94251.0 0.0   1   0.0 0.0 94251.0, 94251.0 -0.71
MA/MyJ m 61224.0 0.0   1   0.0 0.0 61224.0, 61224.0 -1.28
NOD/ShiLtJ m 170100.0 0.0   1   0.0 0.0 170100.0, 170100.0 0.6
NON/ShiLtJ m 288082.0 0.0   1   0.0 0.0 288082.0, 288082.0 2.63
NZW/LacJ m 92059.0 0.0   1   0.0 0.0 92059.0, 92059.0 -0.75
PL/J m 139363.0 0.0   1   0.0 0.0 139363.0, 139363.0 0.07
RIIIS/J m 41281.0 0.0   1   0.0 0.0 41281.0, 41281.0 -1.62
SEA/GnJ m 114495.0 0.0   1   0.0 0.0 114495.0, 114495.0 -0.36
SJL/J m 74393.0 0.0   1   0.0 0.0 74393.0, 74393.0 -1.05
SM/J m 103776.0 0.0   1   0.0 0.0 103776.0, 103776.0 -0.55
SWR/J m 160177.0 0.0   1   0.0 0.0 160177.0, 160177.0 0.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 159559.65 31073.3065 222708.2065 96411.0935
AXB19b/PgnJ m 142696.05 31073.3065 205844.6065 79547.4935
AXB24/PgnJ m 165857.6 31073.3065 229006.1565 102709.0435
BALB/cJ m 157570.9333 25371.2485 209131.5138 106010.3529
BXA16/PgnJ m 153363.75 31073.3065 216512.3065 90215.1935
BXD19/TyJ m 153659.65 31073.3065 216808.2065 90511.0935
BXD28/TyJ m 91930.25 31073.3065 155078.8065 28781.6935
BXH4/TyJ m 86460.75 31073.3065 149609.3065 23312.1935
C3H/HeJ m 93729.25 31073.3065 156877.8065 30580.6935
C57BL/6J m 202485.34 19652.4846 242423.9939 162546.6861
CXB11/HiAJ m 182851.35 31073.3065 245999.9065 119702.7935
CXB12/HiAJ m 142807.45 31073.3065 205956.0065 79658.8935
CXB13/HiAJ m 236639.1 25371.2485 288199.6805 185078.5195
CXB1/ByJ m 220239.9667 25371.2485 271800.5471 168679.3862
CXB2/ByJ m 214046.8667 25371.2485 265607.4471 162486.2862
CXB3/ByJ m 316327.95 31073.3065 379476.5065 253179.3935
CXB4/ByJ m 179972.45 31073.3065 243121.0065 116823.8935
CXB6/ByJ m 213427.1 25371.2485 264987.6805 161866.5195
CXB7/ByJ m 160518.6 31073.3065 223667.1565 97370.0435
CXB8/HiAJ m 256079.6333 25371.2485 307640.2138 204519.0529
CXB9/HiAJ m 268086.5667 25371.2485 319647.1471 216525.9862
DBA/2J m 120323.675 21972.1457 164976.4475 75670.9025




  GWAS USING LINEAR MIXED MODELS

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