Phenotype measure:   HMDPpheno8   linolenate

ID, description, units MPD:50326   linolenate   linolenate [alpha or gamma; (18:3n3 or 6)] (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - linolenate [alpha or gamma; (18:3n3 or 6)] (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means9412567   None
Median of the strain means9786062   None
SD of the strain means± 2798019
Coefficient of variation (CV)0.297
Min–max range of strain means1677525   –   15016455   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 197236941483116.0 9392235308719.81 1.4509 0.1631
Residuals 34 220087543327456.0 6473163039042.81


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 13608151.0 0.0   1   0.0 0.0 13608151.0, 13608151.0 1.5
A/J m 9224677.0 1006636.0   2   711799.0 0.109 8512878.0, 9936476.0 -0.07
AKR/J m 11083515.0 0.0   1   0.0 0.0 11083515.0, 11083515.0 0.6
AXB10/PgnJ m 10026576.0 0.0   1   0.0 0.0 10026576.0, 10026576.0 0.22
AXB12/PgnJ m 10712516.0 0.0   1   0.0 0.0 10712516.0, 10712516.0 0.46
AXB13/PgnJ m 9208730.0 0.0   1   0.0 0.0 9208730.0, 9208730.0 -0.07
AXB15/PgnJ m 10895664.0 0.0   1   0.0 0.0 10895664.0, 10895664.0 0.53
AXB19a/PgnJ m 7184520.0 0.0   1   0.0 0.0 7184520.0, 7184520.0 -0.8
AXB19b/PgnJ m 4455858.0 1432114.0   2   1012657.0 0.321 3443200.0, 5468515.0 -1.77
AXB19/PgnJ m 8187258.0 0.0   1   0.0 0.0 8187258.0, 8187258.0 -0.44
AXB1/PgnJ m 3911463.0 0.0   1   0.0 0.0 3911463.0, 3911463.0 -1.97
AXB23/PgnJ m 12863836.0 0.0   1   0.0 0.0 12863836.0, 12863836.0 1.23
AXB24/PgnJ m 10226640.0 1284069.0   2   907974.0 0.126 9318666.0, 11134614.0 0.29
AXB2/PgnJ m 10058251.0 0.0   1   0.0 0.0 10058251.0, 10058251.0 0.23
AXB4/PgnJ m 5674122.0 0.0   1   0.0 0.0 5674122.0, 5674122.0 -1.34
AXB5/PgnJ m 12994477.0 0.0   1   0.0 0.0 12994477.0, 12994477.0 1.28
AXB6/PgnJ m 8104170.0 0.0   1   0.0 0.0 8104170.0, 8104170.0 -0.47
AXB8/PgnJ m 8923089.0 0.0   1   0.0 0.0 8923089.0, 8923089.0 -0.17
BALB/cJ m 9735418.0 961075.0   3 554877.0 0.0987 8849100.0, 10756933.0 0.12
BTBR T+ Itpr3tf/J m 6342152.0 0.0   1   0.0 0.0 6342152.0, 6342152.0 -1.1
BUB/BnJ m 12419524.0 0.0   1   0.0 0.0 12419524.0, 12419524.0 1.07
BXA11/PgnJ m 12200977.0 0.0   1   0.0 0.0 12200977.0, 12200977.0 1.0
BXA12/PgnJ m 10054999.0 0.0   1   0.0 0.0 10054999.0, 10054999.0 0.23
BXA13/PgnJ m 4943486.0 0.0   1   0.0 0.0 4943486.0, 4943486.0 -1.6
BXA14/PgnJ m 2173089.0 0.0   1   0.0 0.0 2173089.0, 2173089.0 -2.59
BXA16/PgnJ m 9711074.0 1338820.0   2   946688.0 0.138 8764385.0, 10657762.0 0.11
BXA1/PgnJ m 11783317.0 0.0   1   0.0 0.0 11783317.0, 11783317.0 0.85
BXA24/PgnJ m 7573244.0 0.0   1   0.0 0.0 7573244.0, 7573244.0 -0.66
BXA25/PgnJ m 9904800.0 0.0   1   0.0 0.0 9904800.0, 9904800.0 0.18
BXA26/PgnJ m 12412768.0 0.0   1   0.0 0.0 12412768.0, 12412768.0 1.07
BXA2/PgnJ m 10821451.0 0.0   1   0.0 0.0 10821451.0, 10821451.0 0.5
BXA4/PgnJ m 7212331.0 0.0   1   0.0 0.0 7212331.0, 7212331.0 -0.79
BXA7/PgnJ m 9442397.0 0.0   1   0.0 0.0 9442397.0, 9442397.0 0.01
BXA8/PgnJ m 10194232.0 0.0   1   0.0 0.0 10194232.0, 10194232.0 0.28
BXD11/TyJ m 10402853.0 0.0   1   0.0 0.0 10402853.0, 10402853.0 0.35
BXD12/TyJ m 8473280.0 0.0   1   0.0 0.0 8473280.0, 8473280.0 -0.34
BXD13/TyJ m 11563712.0 0.0   1   0.0 0.0 11563712.0, 11563712.0 0.77
BXD14/TyJ m 6251703.0 0.0   1   0.0 0.0 6251703.0, 6251703.0 -1.13
BXD15/TyJ m 11086066.0 0.0   1   0.0 0.0 11086066.0, 11086066.0 0.6
BXD18/TyJ m 10898637.0 0.0   1   0.0 0.0 10898637.0, 10898637.0 0.53
BXD19/TyJ m 11754374.0 1182129.0   2   835891.0 0.101 10918482.0, 12590265.0 0.84
BXD1/TyJ m 9008179.0 0.0   1   0.0 0.0 9008179.0, 9008179.0 -0.14
BXD20/TyJ m 4993896.0 0.0   1   0.0 0.0 4993896.0, 4993896.0 -1.58
BXD21/TyJ m 11343149.0 0.0   1   0.0 0.0 11343149.0, 11343149.0 0.69
BXD22/TyJ m 10720317.0 0.0   1   0.0 0.0 10720317.0, 10720317.0 0.47
BXD24/TyJ m 12375129.0 0.0   1   0.0 0.0 12375129.0, 12375129.0 1.06
BXD24/TyJ-Cep290rd16/J m 9233957.0 0.0   1   0.0 0.0 9233957.0, 9233957.0 -0.06
BXD28/TyJ m 12253741.0 1136495.0   2   803623.0 0.0927 11450118.0, 13057364.0 1.02
BXD29-Tlr4lps-2J/J m 7091422.0 0.0   1   0.0 0.0 7091422.0, 7091422.0 -0.83
BXD2/TyJ m 7004056.0 0.0   1   0.0 0.0 7004056.0, 7004056.0 -0.86
BXD32/TyJ m 14577425.0 0.0   1   0.0 0.0 14577425.0, 14577425.0 1.85
BXD33/TyJ m 4536040.0 0.0   1   0.0 0.0 4536040.0, 4536040.0 -1.74
BXD34/TyJ m 11857930.0 0.0   1   0.0 0.0 11857930.0, 11857930.0 0.87
BXD36/TyJ m 12074703.0 0.0   1   0.0 0.0 12074703.0, 12074703.0 0.95
BXD38/TyJ m 12617862.0 0.0   1   0.0 0.0 12617862.0, 12617862.0 1.15
BXD39/TyJ m 6970920.0 0.0   1   0.0 0.0 6970920.0, 6970920.0 -0.87
BXD40/TyJ m 12365686.0 0.0   1   0.0 0.0 12365686.0, 12365686.0 1.06
BXD42/TyJ m 7730278.0 0.0   1   0.0 0.0 7730278.0, 7730278.0 -0.6
BXD5/TyJ m 9768821.0 0.0   1   0.0 0.0 9768821.0, 9768821.0 0.13
BXD6/TyJ m 9277951.0 0.0   1   0.0 0.0 9277951.0, 9277951.0 -0.05
BXD8/TyJ m 13892072.0 0.0   1   0.0 0.0 13892072.0, 13892072.0 1.6
BXD9/TyJ m 10444896.0 0.0   1   0.0 0.0 10444896.0, 10444896.0 0.37
BXH10/TyJ m 6775694.0 0.0   1   0.0 0.0 6775694.0, 6775694.0 -0.94
BXH19/TyJ m 3625489.0 0.0   1   0.0 0.0 3625489.0, 3625489.0 -2.07
BXH20/KccJ m 7904501.0 0.0   1   0.0 0.0 7904501.0, 7904501.0 -0.54
BXH22/KccJ m 9295289.0 0.0   1   0.0 0.0 9295289.0, 9295289.0 -0.04
BXH2/TyJ m 6822278.0 0.0   1   0.0 0.0 6822278.0, 6822278.0 -0.93
BXH4/TyJ m 7582135.0 908227.0   2   642213.0 0.12 6939922.0, 8224348.0 -0.65
BXH6/TyJ m 6664133.0 0.0   1   0.0 0.0 6664133.0, 6664133.0 -0.98
BXH7/TyJ m 7983783.0 0.0   1   0.0 0.0 7983783.0, 7983783.0 -0.51
BXH8/TyJ m 7147222.0 0.0   1   0.0 0.0 7147222.0, 7147222.0 -0.81
BXH9/TyJ m 10418741.0 0.0   1   0.0 0.0 10418741.0, 10418741.0 0.36
C3H/HeJ m 8030679.0 3454871.0   2   2442963.0 0.43 5587716.0, 10473642.0 -0.49
C57BL/6J m 11071190.0 2836828.0   5 1268668.0 0.256 7115353.0, 14790054.0 0.59
C57L/J m 11092091.0 0.0   1   0.0 0.0 11092091.0, 11092091.0 0.6
C58/J m 1677525.0 0.0   1   0.0 0.0 1677525.0, 1677525.0 -2.76
CAST/EiJ m 2783467.0 0.0   1   0.0 0.0 2783467.0, 2783467.0 -2.37
CBA/J m 11724590.0 0.0   1   0.0 0.0 11724590.0, 11724590.0 0.83
CE/J m 9601386.0 0.0   1   0.0 0.0 9601386.0, 9601386.0 0.07
CXB11/HiAJ m 9975296.0 5504410.0   2   3892205.0 0.552 6083091.0, 13867502.0 0.2
CXB12/HiAJ m 12432267.0 453630.0   2   320765.0 0.0365 12111502.0, 12753032.0 1.08
CXB13/HiAJ m 11439141.0 5069280.0   3 2926750.0 0.443 6605624.0, 16715171.0 0.72
CXB1/ByJ m 9072822.0 3868307.0   3 2233368.0 0.426 4769408.0, 12261002.0 -0.12
CXB2/ByJ m 11023670.0 1691903.0   3 976820.0 0.153 9960433.0, 12974683.0 0.58
CXB3/ByJ m 10497948.0 257293.0   2   181933.0 0.0245 10316014.0, 10679881.0 0.39
CXB4/ByJ m 9803302.0 281876.0   2   199316.0 0.0288 9603985.0, 10002618.0 0.14
CXB6/ByJ m 8467768.0 1136793.0   3 656328.0 0.134 7529198.0, 9731794.0 -0.34
CXB7/ByJ m 7941702.0 183299.0   2   129612.0 0.0231 7812090.0, 8071314.0 -0.53
CXB8/HiAJ m 9539548.0 3017396.0   3 1742094.0 0.316 7056346.0, 12897740.0 0.05
CXB9/HiAJ m 13996645.0 2807990.0   3 1621194.0 0.201 11228860.0, 16843184.0 1.64
DBA/2J m 11137132.0 1807322.0   4 903661.0 0.162 8625345.0, 12876272.0 0.62
FVB/NJ m 6329394.0 0.0   1   0.0 0.0 6329394.0, 6329394.0 -1.1
I/LnJ m 5147888.0 0.0   1   0.0 0.0 5147888.0, 5147888.0 -1.52
KK/HlJ m 8045321.0 0.0   1   0.0 0.0 8045321.0, 8045321.0 -0.49
LG/J m 5725414.0 0.0   1   0.0 0.0 5725414.0, 5725414.0 -1.32
LP/J m 6916724.0 0.0   1   0.0 0.0 6916724.0, 6916724.0 -0.89
MA/MyJ m 11402389.0 0.0   1   0.0 0.0 11402389.0, 11402389.0 0.71
NOD/ShiLtJ m 14087553.0 0.0   1   0.0 0.0 14087553.0, 14087553.0 1.67
NON/ShiLtJ m 9647038.0 0.0   1   0.0 0.0 9647038.0, 9647038.0 0.08
NZW/LacJ m 10594402.0 0.0   1   0.0 0.0 10594402.0, 10594402.0 0.42
PL/J m 12187777.0 0.0   1   0.0 0.0 12187777.0, 12187777.0 0.99
RIIIS/J m 15016455.0 0.0   1   0.0 0.0 15016455.0, 15016455.0 2.0
SEA/GnJ m 13257736.0 0.0   1   0.0 0.0 13257736.0, 13257736.0 1.37
SJL/J m 6494598.0 0.0   1   0.0 0.0 6494598.0, 6494598.0 -1.04
SM/J m 10585913.0 0.0   1   0.0 0.0 10585913.0, 10585913.0 0.42
SWR/J m 11928280.0 0.0   1   0.0 0.0 11928280.0, 11928280.0 0.9


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 9224677.0 1799050.1715 12880786.833 5568567.167
AXB19b/PgnJ m 4455857.65 1799050.1715 8111967.483 799747.817
AXB24/PgnJ m 10226640.0 1799050.1715 13882749.833 6570530.167
BALB/cJ m 9735418.3333 1468918.3139 12720619.5115 6750217.1552
BXA16/PgnJ m 9711073.5 1799050.1715 13367183.333 6054963.667
BXD19/TyJ m 11754373.5 1799050.1715 15410483.333 8098263.667
BXD28/TyJ m 12253741.0 1799050.1715 15909850.833 8597631.167
BXH4/TyJ m 7582134.75 1799050.1715 11238244.583 3926024.917
C3H/HeJ m 8030679.25 1799050.1715 11686789.083 4374569.417
C57BL/6J m 11071189.8 1137819.2334 13383516.6896 8758862.9104
CXB11/HiAJ m 9975296.5 1799050.1715 13631406.333 6319186.667
CXB12/HiAJ m 12432267.0 1799050.1715 16088376.833 8776157.167
CXB13/HiAJ m 11439140.8333 1468918.3139 14424342.0115 8453939.6552
CXB1/ByJ m 9072821.5 1468918.3139 12058022.6781 6087620.3219
CXB2/ByJ m 11023670.3333 1468918.3139 14008871.5115 8038469.1552
CXB3/ByJ m 10497947.5 1799050.1715 14154057.333 6841837.667
CXB4/ByJ m 9803301.5 1799050.1715 13459411.333 6147191.667
CXB6/ByJ m 8467768.0 1468918.3139 11452969.1781 5482566.8219
CXB7/ByJ m 7941702.5 1799050.1715 11597812.333 4285592.667
CXB8/HiAJ m 9539547.5 1468918.3139 12524748.6781 6554346.3219
CXB9/HiAJ m 13996645.0 1468918.3139 16981846.1781 11011443.8219
DBA/2J m 11137131.5 1272120.576 13722391.5557 8551871.4443




  GWAS USING LINEAR MIXED MODELS