Project measure / variable:   HMDPpheno8   DPA

ID, description, units MPD:50324   DPA   docosapentaenoate (n3 DPA; 22:5n3) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means4155240   None
Median of the strain means4062583   None
SD of the strain means± 1362146
Coefficient of variation (CV)0.328
Min–max range of strain means1587632   –   8328628   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 103211838988235.0 4914849475630.26 2.3678 0.0123
Residuals 34 70574954354348.0 2075733951598.47


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 3328374.0 0.0   1   0.0 0.0 3328374.0, 3328374.0 -0.61
A/J m 3449557.0 42035.0   2   29723.0 0.0122 3419834.0, 3479281.0 -0.52
AKR/J m 2466270.0 0.0   1   0.0 0.0 2466270.0, 2466270.0 -1.24
AXB10/PgnJ m 3706828.0 0.0   1   0.0 0.0 3706828.0, 3706828.0 -0.33
AXB12/PgnJ m 3489975.0 0.0   1   0.0 0.0 3489975.0, 3489975.0 -0.49
AXB13/PgnJ m 3928078.0 0.0   1   0.0 0.0 3928078.0, 3928078.0 -0.17
AXB15/PgnJ m 3082600.0 0.0   1   0.0 0.0 3082600.0, 3082600.0 -0.79
AXB19a/PgnJ m 4564860.0 0.0   1   0.0 0.0 4564860.0, 4564860.0 0.3
AXB19b/PgnJ m 4230549.0 343571.0   2   242941.0 0.0812 3987607.0, 4473490.0 0.06
AXB19/PgnJ m 6177530.0 0.0   1   0.0 0.0 6177530.0, 6177530.0 1.48
AXB1/PgnJ m 3684163.0 0.0   1   0.0 0.0 3684163.0, 3684163.0 -0.35
AXB23/PgnJ m 4970115.0 0.0   1   0.0 0.0 4970115.0, 4970115.0 0.6
AXB24/PgnJ m 3883086.0 927139.0   2   655586.0 0.239 3227500.0, 4538672.0 -0.2
AXB2/PgnJ m 3833557.0 0.0   1   0.0 0.0 3833557.0, 3833557.0 -0.24
AXB4/PgnJ m 5440748.0 0.0   1   0.0 0.0 5440748.0, 5440748.0 0.94
AXB5/PgnJ m 2746289.0 0.0   1   0.0 0.0 2746289.0, 2746289.0 -1.03
AXB6/PgnJ m 6730870.0 0.0   1   0.0 0.0 6730870.0, 6730870.0 1.89
AXB8/PgnJ m 5840828.0 0.0   1   0.0 0.0 5840828.0, 5840828.0 1.24
BALB/cJ m 4757066.0 71703.0   3 41398.0 0.0151 4702997.0, 4838402.0 0.44
BTBR T+ Itpr3tf/J m 2708631.0 0.0   1   0.0 0.0 2708631.0, 2708631.0 -1.06
BUB/BnJ m 3348180.0 0.0   1   0.0 0.0 3348180.0, 3348180.0 -0.59
BXA11/PgnJ m 4071854.0 0.0   1   0.0 0.0 4071854.0, 4071854.0 -0.06
BXA12/PgnJ m 4668438.0 0.0   1   0.0 0.0 4668438.0, 4668438.0 0.38
BXA13/PgnJ m 3328129.0 0.0   1   0.0 0.0 3328129.0, 3328129.0 -0.61
BXA14/PgnJ m 1587632.0 0.0   1   0.0 0.0 1587632.0, 1587632.0 -1.88
BXA16/PgnJ m 4369480.0 665094.0   2   470292.0 0.152 3899188.0, 4839772.0 0.16
BXA1/PgnJ m 7071248.0 0.0   1   0.0 0.0 7071248.0, 7071248.0 2.14
BXA24/PgnJ m 4778643.0 0.0   1   0.0 0.0 4778643.0, 4778643.0 0.46
BXA25/PgnJ m 3644164.0 0.0   1   0.0 0.0 3644164.0, 3644164.0 -0.38
BXA26/PgnJ m 5171806.0 0.0   1   0.0 0.0 5171806.0, 5171806.0 0.75
BXA2/PgnJ m 4939716.0 0.0   1   0.0 0.0 4939716.0, 4939716.0 0.58
BXA4/PgnJ m 1797881.0 0.0   1   0.0 0.0 1797881.0, 1797881.0 -1.73
BXA7/PgnJ m 3960869.0 0.0   1   0.0 0.0 3960869.0, 3960869.0 -0.14
BXA8/PgnJ m 6943295.0 0.0   1   0.0 0.0 6943295.0, 6943295.0 2.05
BXD11/TyJ m 2493678.0 0.0   1   0.0 0.0 2493678.0, 2493678.0 -1.22
BXD12/TyJ m 4329650.0 0.0   1   0.0 0.0 4329650.0, 4329650.0 0.13
BXD13/TyJ m 3302271.0 0.0   1   0.0 0.0 3302271.0, 3302271.0 -0.63
BXD14/TyJ m 4126800.0 0.0   1   0.0 0.0 4126800.0, 4126800.0 -0.02
BXD15/TyJ m 2078558.0 0.0   1   0.0 0.0 2078558.0, 2078558.0 -1.52
BXD18/TyJ m 3647635.0 0.0   1   0.0 0.0 3647635.0, 3647635.0 -0.37
BXD19/TyJ m 4041844.0 55742.0   2   39416.0 0.0138 4002428.0, 4081260.0 -0.08
BXD1/TyJ m 4942469.0 0.0   1   0.0 0.0 4942469.0, 4942469.0 0.58
BXD20/TyJ m 3369800.0 0.0   1   0.0 0.0 3369800.0, 3369800.0 -0.58
BXD21/TyJ m 2823990.0 0.0   1   0.0 0.0 2823990.0, 2823990.0 -0.98
BXD22/TyJ m 3122520.0 0.0   1   0.0 0.0 3122520.0, 3122520.0 -0.76
BXD24/TyJ m 2532238.0 0.0   1   0.0 0.0 2532238.0, 2532238.0 -1.19
BXD24/TyJ-Cep290rd16/J m 2004527.0 0.0   1   0.0 0.0 2004527.0, 2004527.0 -1.58
BXD28/TyJ m 3711773.0 685120.0   2   484453.0 0.185 3227320.0, 4196226.0 -0.33
BXD29-Tlr4lps-2J/J m 4075001.0 0.0   1   0.0 0.0 4075001.0, 4075001.0 -0.06
BXD2/TyJ m 5757247.0 0.0   1   0.0 0.0 5757247.0, 5757247.0 1.18
BXD32/TyJ m 4861652.0 0.0   1   0.0 0.0 4861652.0, 4861652.0 0.52
BXD33/TyJ m 2359216.0 0.0   1   0.0 0.0 2359216.0, 2359216.0 -1.32
BXD34/TyJ m 2406442.0 0.0   1   0.0 0.0 2406442.0, 2406442.0 -1.28
BXD36/TyJ m 3446830.0 0.0   1   0.0 0.0 3446830.0, 3446830.0 -0.52
BXD38/TyJ m 2540559.0 0.0   1   0.0 0.0 2540559.0, 2540559.0 -1.19
BXD39/TyJ m 8328628.0 0.0   1   0.0 0.0 8328628.0, 8328628.0 3.06
BXD40/TyJ m 3258703.0 0.0   1   0.0 0.0 3258703.0, 3258703.0 -0.66
BXD42/TyJ m 3989249.0 0.0   1   0.0 0.0 3989249.0, 3989249.0 -0.12
BXD5/TyJ m 4226538.0 0.0   1   0.0 0.0 4226538.0, 4226538.0 0.05
BXD6/TyJ m 3435328.0 0.0   1   0.0 0.0 3435328.0, 3435328.0 -0.53
BXD8/TyJ m 1972464.0 0.0   1   0.0 0.0 1972464.0, 1972464.0 -1.6
BXD9/TyJ m 5552323.0 0.0   1   0.0 0.0 5552323.0, 5552323.0 1.03
BXH10/TyJ m 3916354.0 0.0   1   0.0 0.0 3916354.0, 3916354.0 -0.18
BXH19/TyJ m 4500526.0 0.0   1   0.0 0.0 4500526.0, 4500526.0 0.25
BXH20/KccJ m 4828110.0 0.0   1   0.0 0.0 4828110.0, 4828110.0 0.49
BXH22/KccJ m 5074860.0 0.0   1   0.0 0.0 5074860.0, 5074860.0 0.68
BXH2/TyJ m 4771396.0 0.0   1   0.0 0.0 4771396.0, 4771396.0 0.45
BXH4/TyJ m 4053312.0 490281.0   2   346681.0 0.121 3706631.0, 4399993.0 -0.07
BXH6/TyJ m 3554402.0 0.0   1   0.0 0.0 3554402.0, 3554402.0 -0.44
BXH7/TyJ m 2696024.0 0.0   1   0.0 0.0 2696024.0, 2696024.0 -1.07
BXH8/TyJ m 4804852.0 0.0   1   0.0 0.0 4804852.0, 4804852.0 0.48
BXH9/TyJ m 4392416.0 0.0   1   0.0 0.0 4392416.0, 4392416.0 0.17
C3H/HeJ m 4673196.0 1583769.0   2   1119894.0 0.339 3553302.0, 5793090.0 0.38
C57BL/6J m 4248216.0 851860.0   5 380963.0 0.201 2774767.0, 4864321.0 0.07
C57L/J m 5775170.0 0.0   1   0.0 0.0 5775170.0, 5775170.0 1.19
C58/J m 3242316.0 0.0   1   0.0 0.0 3242316.0, 3242316.0 -0.67
CAST/EiJ m 1745472.0 0.0   1   0.0 0.0 1745472.0, 1745472.0 -1.77
CBA/J m 4603510.0 0.0   1   0.0 0.0 4603510.0, 4603510.0 0.33
CE/J m 5888810.0 0.0   1   0.0 0.0 5888810.0, 5888810.0 1.27
CXB11/HiAJ m 4302289.0 1008491.0   2   713111.0 0.234 3589178.0, 5015400.0 0.11
CXB12/HiAJ m 3831672.0 404073.0   2   285723.0 0.105 3545948.0, 4117394.0 -0.24
CXB13/HiAJ m 5425743.0 391641.0   3 226114.0 0.0722 5011428.0, 5789872.0 0.93
CXB1/ByJ m 6526188.0 1838852.0   3 1061662.0 0.282 5379168.0, 8647159.0 1.74
CXB2/ByJ m 8095118.0 2333681.0   3 1347352.0 0.288 6247733.0, 10717765.0 2.89
CXB3/ByJ m 4599332.0 670284.0   2   473962.0 0.146 4125370.0, 5073295.0 0.33
CXB4/ByJ m 6438498.0 668194.0   2   472484.0 0.104 5966014.0, 6910983.0 1.68
CXB6/ByJ m 4519083.0 3156198.0   3 1822232.0 0.698 2511030.0, 8157000.0 0.27
CXB7/ByJ m 5297198.0 1017363.0   2   719384.0 0.192 4577814.0, 6016582.0 0.84
CXB8/HiAJ m 6652109.0 1348607.0   3 778619.0 0.203 5343762.0, 8037660.0 1.83
CXB9/HiAJ m 6520719.0 2934616.0   3 1694301.0 0.45 3958038.0, 9722078.0 1.74
DBA/2J m 2535033.0 622280.0   4 311140.0 0.245 2008752.0, 3413328.0 -1.19
FVB/NJ m 2714280.0 0.0   1   0.0 0.0 2714280.0, 2714280.0 -1.06
I/LnJ m 3646657.0 0.0   1   0.0 0.0 3646657.0, 3646657.0 -0.37
KK/HlJ m 5899964.0 0.0   1   0.0 0.0 5899964.0, 5899964.0 1.28
LG/J m 4685394.0 0.0   1   0.0 0.0 4685394.0, 4685394.0 0.39
LP/J m 3204393.0 0.0   1   0.0 0.0 3204393.0, 3204393.0 -0.7
MA/MyJ m 2694296.0 0.0   1   0.0 0.0 2694296.0, 2694296.0 -1.07
NOD/ShiLtJ m 4073284.0 0.0   1   0.0 0.0 4073284.0, 4073284.0 -0.06
NON/ShiLtJ m 2908156.0 0.0   1   0.0 0.0 2908156.0, 2908156.0 -0.92
NZW/LacJ m 5622167.0 0.0   1   0.0 0.0 5622167.0, 5622167.0 1.08
PL/J m 4072595.0 0.0   1   0.0 0.0 4072595.0, 4072595.0 -0.06
RIIIS/J m 3585048.0 0.0   1   0.0 0.0 3585048.0, 3585048.0 -0.42
SEA/GnJ m 3069217.0 0.0   1   0.0 0.0 3069217.0, 3069217.0 -0.8
SJL/J m 4126059.0 0.0   1   0.0 0.0 4126059.0, 4126059.0 -0.02
SM/J m 2668718.0 0.0   1   0.0 0.0 2668718.0, 2668718.0 -1.09
SWR/J m 4534030.0 0.0   1   0.0 0.0 4534030.0, 4534030.0 0.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 3449557.4 1018757.5648 5519921.8674 1379192.9326
AXB19b/PgnJ m 4230548.65 1018757.5648 6300913.1174 2160184.1826
AXB24/PgnJ m 3883086.5 1018757.5648 5953450.9674 1812722.0326
BALB/cJ m 4757065.6667 831812.0684 6447511.1755 3066620.1578
BXA16/PgnJ m 4369480.25 1018757.5648 6439844.7174 2299115.7826
BXD19/TyJ m 4041843.65 1018757.5648 6112208.1174 1971479.1826
BXD28/TyJ m 3711773.0 1018757.5648 5782137.4674 1641408.5326
BXH4/TyJ m 4053312.0 1018757.5648 6123676.4674 1982947.5326
C3H/HeJ m 4673196.25 1018757.5648 6743560.7174 2602831.7826
C57BL/6J m 4248215.66 644318.8576 5557629.1207 2938802.1993
CXB11/HiAJ m 4302289.25 1018757.5648 6372653.7174 2231924.7826
CXB12/HiAJ m 3831671.5 1018757.5648 5902035.9674 1761307.0326
CXB13/HiAJ m 5425742.8333 831812.0684 7116188.3422 3735297.3245
CXB1/ByJ m 6526187.5 831812.0684 8216633.0089 4835741.9911
CXB2/ByJ m 8095118.5 831812.0684 9785564.0089 6404672.9911
CXB3/ByJ m 4599332.5 1018757.5648 6669696.9674 2528968.0326
CXB4/ByJ m 6438498.5 1018757.5648 8508862.9674 4368134.0326
CXB6/ByJ m 4519083.4333 831812.0684 6209528.9422 2828637.9245
CXB7/ByJ m 5297198.25 1018757.5648 7367562.7174 3226833.7826
CXB8/HiAJ m 6652109.3333 831812.0684 8342554.8422 4961663.8245
CXB9/HiAJ m 6520718.8333 831812.0684 8211164.3422 4830273.3245
DBA/2J m 2535032.85 720370.3824 3999001.6044 1071064.0956




  GWAS USING LINEAR MIXED MODELS

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