Project measure / variable:   HMDPpheno8   dihomo_linolenate

ID, description, units MPD:50323   dihomo_linolenate   dihomo-linolenate (20:3n3 or n6) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - dihomo-linolenate (20:3n3 or n6) (16h fast), relative abundance

CXB9/HiAJC57L/JCXB8/HiAJBXA8/PgnJBXA26/PgnJCXB2/ByJNZW/LacJBXA1/PgnJCE/JKK/HlJBXD32/TyJAXB23/PgnJBXD39/TyJBXH19/TyJCXB7/ByJCXB13/HiAJBUB/BnJCXB1/ByJBXA2/PgnJAXB6/PgnJBXD9/TyJC58/JCXB12/HiAJBXH22/KccJCXB4/ByJBALB/cJBXA12/PgnJCBA/JAXB19/PgnJBXA24/PgnJBXH9/TyJC3H/HeJSWR/JBXA16/PgnJC57BL/6J129X1/SvJAXB1/PgnJCXB3/ByJNOD/ShiLtJBXD29-Tlr4<lps-2J>/JBXD2/TyJBXH8/TyJBXD5/TyJSJL/JBXH2/TyJAXB2/PgnJBXD6/TyJBXA11/PgnJLP/JAXB24/PgnJAKR/JPL/JCXB11/HiAJAXB8/PgnJBXA14/PgnJBXD1/TyJAXB4/PgnJCXB6/ByJBXD12/TyJBXD42/TyJBXH10/TyJSEA/GnJBXH20/KccJBXA25/PgnJMA/MyJBXD14/TyJRIIIS/JBXA7/PgnJAXB12/PgnJBXH4/TyJBXD40/TyJAXB5/PgnJBXD18/TyJBTBR T<+> Itpr3<tf>/JA/JAXB19b/PgnJFVB/NJBXA13/PgnJBXD36/TyJBXD13/TyJBXD19/TyJBXH6/TyJAXB19a/PgnJLG/JAXB15/PgnJBXD22/TyJBXD28/TyJI/LnJBXD21/TyJBXD38/TyJAXB10/PgnJBXH7/TyJBXD8/TyJNON/ShiLtJBXD11/TyJBXD20/TyJCAST/EiJAXB13/PgnJSM/JBXD34/TyJDBA/2JBXD24/TyJBXD15/TyJBXA4/PgnJBXD33/TyJBXD24/TyJ-Cep290<rd16>/J (no units) 1,000,0002,000,0003,000,0004,000,0005,000,0006,000,0007,000,000femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means1721716   None
Median of the strain means1648688   None
SD of the strain means± 596878
Coefficient of variation (CV)0.347
Min–max range of strain means700425   –   4318556   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 30868078782271.6 1469908513441.5 2.1668 0.0217
Residuals 34 23064533151305.5 678368622097.22


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 106 (106)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129X1/SvJ m 1881505.0 0.0   1   0.0 0.0 1881505.0, 1881505.0 0.27
A/J m 1342663.0 239170.0   2   169119.0 0.178 1173544.0, 1511781.0 -0.64
AKR/J m 1655211.0 0.0   1   0.0 0.0 1655211.0, 1655211.0 -0.11
AXB10/PgnJ m 1159296.0 0.0   1   0.0 0.0 1159296.0, 1159296.0 -0.94
AXB12/PgnJ m 1456768.0 0.0   1   0.0 0.0 1456768.0, 1456768.0 -0.44
AXB13/PgnJ m 1100590.0 0.0   1   0.0 0.0 1100590.0, 1100590.0 -1.04
AXB15/PgnJ m 1222920.0 0.0   1   0.0 0.0 1222920.0, 1222920.0 -0.84
AXB19a/PgnJ m 1258943.0 0.0   1   0.0 0.0 1258943.0, 1258943.0 -0.78
AXB19b/PgnJ m 1318893.0 192154.0   2   135874.0 0.146 1183019.0, 1454766.0 -0.67
AXB19/PgnJ m 1999416.0 0.0   1   0.0 0.0 1999416.0, 1999416.0 0.47
AXB1/PgnJ m 1838899.0 0.0   1   0.0 0.0 1838899.0, 1838899.0 0.2
AXB23/PgnJ m 2487763.0 0.0   1   0.0 0.0 2487763.0, 2487763.0 1.28
AXB24/PgnJ m 1657287.0 12052.0   2   8522.0 0.00727 1648765.0, 1665809.0 -0.11
AXB2/PgnJ m 1682304.0 0.0   1   0.0 0.0 1682304.0, 1682304.0 -0.07
AXB4/PgnJ m 1566426.0 0.0   1   0.0 0.0 1566426.0, 1566426.0 -0.26
AXB5/PgnJ m 1389638.0 0.0   1   0.0 0.0 1389638.0, 1389638.0 -0.56
AXB6/PgnJ m 2159387.0 0.0   1   0.0 0.0 2159387.0, 2159387.0 0.73
AXB8/PgnJ m 1646500.0 0.0   1   0.0 0.0 1646500.0, 1646500.0 -0.13
BALB/cJ m 2081480.0 288749.0   3 166709.0 0.139 1749247.0, 2271924.0 0.6
BTBR T+ Itpr3tf/J m 1351028.0 0.0   1   0.0 0.0 1351028.0, 1351028.0 -0.62
BUB/BnJ m 2287675.0 0.0   1   0.0 0.0 2287675.0, 2287675.0 0.95
BXA11/PgnJ m 1675858.0 0.0   1   0.0 0.0 1675858.0, 1675858.0 -0.08
BXA12/PgnJ m 2056157.0 0.0   1   0.0 0.0 2056157.0, 2056157.0 0.56
BXA13/PgnJ m 1299825.0 0.0   1   0.0 0.0 1299825.0, 1299825.0 -0.71
BXA14/PgnJ m 1619616.0 0.0   1   0.0 0.0 1619616.0, 1619616.0 -0.17
BXA16/PgnJ m 1896432.0 564414.0   2   399101.0 0.298 1497330.0, 2295533.0 0.29
BXA1/PgnJ m 2641909.0 0.0   1   0.0 0.0 2641909.0, 2641909.0 1.54
BXA24/PgnJ m 1959819.0 0.0   1   0.0 0.0 1959819.0, 1959819.0 0.4
BXA25/PgnJ m 1504207.0 0.0   1   0.0 0.0 1504207.0, 1504207.0 -0.36
BXA26/PgnJ m 2770533.0 0.0   1   0.0 0.0 2770533.0, 2770533.0 1.76
BXA2/PgnJ m 2199030.0 0.0   1   0.0 0.0 2199030.0, 2199030.0 0.8
BXA4/PgnJ m 833646.0 0.0   1   0.0 0.0 833646.0, 833646.0 -1.49
BXA7/PgnJ m 1461910.0 0.0   1   0.0 0.0 1461910.0, 1461910.0 -0.44
BXA8/PgnJ m 2778688.0 0.0   1   0.0 0.0 2778688.0, 2778688.0 1.77
BXD11/TyJ m 1119563.0 0.0   1   0.0 0.0 1119563.0, 1119563.0 -1.01
BXD12/TyJ m 1545384.0 0.0   1   0.0 0.0 1545384.0, 1545384.0 -0.3
BXD13/TyJ m 1281248.0 0.0   1   0.0 0.0 1281248.0, 1281248.0 -0.74
BXD14/TyJ m 1475820.0 0.0   1   0.0 0.0 1475820.0, 1475820.0 -0.41
BXD15/TyJ m 954538.0 0.0   1   0.0 0.0 954538.0, 954538.0 -1.29
BXD18/TyJ m 1369477.0 0.0   1   0.0 0.0 1369477.0, 1369477.0 -0.59
BXD19/TyJ m 1277378.0 177187.0   2   125290.0 0.139 1152088.0, 1402668.0 -0.74
BXD1/TyJ m 1615040.0 0.0   1   0.0 0.0 1615040.0, 1615040.0 -0.18
BXD20/TyJ m 1116522.0 0.0   1   0.0 0.0 1116522.0, 1116522.0 -1.01
BXD21/TyJ m 1168103.0 0.0   1   0.0 0.0 1168103.0, 1168103.0 -0.93
BXD22/TyJ m 1216170.0 0.0   1   0.0 0.0 1216170.0, 1216170.0 -0.85
BXD24/TyJ m 955926.0 0.0   1   0.0 0.0 955926.0, 955926.0 -1.28
BXD24/TyJ-Cep290rd16/J m 700425.0 0.0   1   0.0 0.0 700425.0, 700425.0 -1.71
BXD28/TyJ m 1209351.0 107577.0   2   76068.0 0.089 1133282.0, 1285419.0 -0.86
BXD29-Tlr4lps-2J/J m 1808973.0 0.0   1   0.0 0.0 1808973.0, 1808973.0 0.15
BXD2/TyJ m 1787380.0 0.0   1   0.0 0.0 1787380.0, 1787380.0 0.11
BXD32/TyJ m 2498057.0 0.0   1   0.0 0.0 2498057.0, 2498057.0 1.3
BXD33/TyJ m 760988.0 0.0   1   0.0 0.0 760988.0, 760988.0 -1.61
BXD34/TyJ m 1035996.0 0.0   1   0.0 0.0 1035996.0, 1035996.0 -1.15
BXD36/TyJ m 1281816.0 0.0   1   0.0 0.0 1281816.0, 1281816.0 -0.74
BXD38/TyJ m 1164448.0 0.0   1   0.0 0.0 1164448.0, 1164448.0 -0.93
BXD39/TyJ m 2480987.0 0.0   1   0.0 0.0 2480987.0, 2480987.0 1.27
BXD40/TyJ m 1401236.0 0.0   1   0.0 0.0 1401236.0, 1401236.0 -0.54
BXD42/TyJ m 1545304.0 0.0   1   0.0 0.0 1545304.0, 1545304.0 -0.3
BXD5/TyJ m 1741624.0 0.0   1   0.0 0.0 1741624.0, 1741624.0 0.03
BXD6/TyJ m 1678161.0 0.0   1   0.0 0.0 1678161.0, 1678161.0 -0.07
BXD8/TyJ m 1126686.0 0.0   1   0.0 0.0 1126686.0, 1126686.0 -1.0
BXD9/TyJ m 2153688.0 0.0   1   0.0 0.0 2153688.0, 2153688.0 0.72
BXH10/TyJ m 1523671.0 0.0   1   0.0 0.0 1523671.0, 1523671.0 -0.33
BXH19/TyJ m 2385958.0 0.0   1   0.0 0.0 2385958.0, 2385958.0 1.11
BXH20/KccJ m 1513673.0 0.0   1   0.0 0.0 1513673.0, 1513673.0 -0.35
BXH22/KccJ m 2140666.0 0.0   1   0.0 0.0 2140666.0, 2140666.0 0.7
BXH2/TyJ m 1711453.0 0.0   1   0.0 0.0 1711453.0, 1711453.0 -0.02
BXH4/TyJ m 1418872.0 109335.0   2   77311.0 0.0771 1341560.0, 1496183.0 -0.51
BXH6/TyJ m 1259663.0 0.0   1   0.0 0.0 1259663.0, 1259663.0 -0.77
BXH7/TyJ m 1137288.0 0.0   1   0.0 0.0 1137288.0, 1137288.0 -0.98
BXH8/TyJ m 1749688.0 0.0   1   0.0 0.0 1749688.0, 1749688.0 0.05
BXH9/TyJ m 1952782.0 0.0   1   0.0 0.0 1952782.0, 1952782.0 0.39
C3H/HeJ m 1918264.0 935110.0   2   661222.0 0.487 1257041.0, 2579486.0 0.33
C57BL/6J m 1896304.0 412797.0   5 184608.0 0.218 1305536.0, 2434505.0 0.29
C57L/J m 3767931.0 0.0   1   0.0 0.0 3767931.0, 3767931.0 3.43
C58/J m 2146227.0 0.0   1   0.0 0.0 2146227.0, 2146227.0 0.71
CAST/EiJ m 1110008.0 0.0   1   0.0 0.0 1110008.0, 1110008.0 -1.02
CBA/J m 2037490.0 0.0   1   0.0 0.0 2037490.0, 2037490.0 0.53
CE/J m 2591238.0 0.0   1   0.0 0.0 2591238.0, 2591238.0 1.46
CXB11/HiAJ m 1650877.0 71808.0   2   50776.0 0.0435 1600101.0, 1701653.0 -0.12
CXB12/HiAJ m 2141161.0 232570.0   2   164452.0 0.109 1976708.0, 2305613.0 0.7
CXB13/HiAJ m 2307019.0 234025.0   3 135115.0 0.101 2038698.0, 2468936.0 0.98
CXB1/ByJ m 2219661.0 231292.0   3 133536.0 0.104 2048986.0, 2482898.0 0.83
CXB2/ByJ m 2767682.0 689344.0   3 397993.0 0.249 2123560.0, 3494743.0 1.75
CXB3/ByJ m 1829165.0 32566.0   2   23028.0 0.0178 1806137.0, 1852193.0 0.18
CXB4/ByJ m 2104141.0 235412.0   2   166462.0 0.112 1937679.0, 2270602.0 0.64
CXB6/ByJ m 1557263.0 966180.0   3 557825.0 0.62 936318.0, 2670434.0 -0.28
CXB7/ByJ m 2331844.0 525452.0   2   371550.0 0.225 1960294.0, 2703395.0 1.02
CXB8/HiAJ m 2867743.0 1768657.0   3 1021135.0 0.617 1828707.0, 4909906.0 1.92
CXB9/HiAJ m 4318556.0 2360592.0   3 1362888.0 0.547 2508316.0, 6988518.0 4.35
DBA/2J m 998863.0 125379.0   4 62690.0 0.126 917038.0, 1185724.0 -1.21
FVB/NJ m 1301717.0 0.0   1   0.0 0.0 1301717.0, 1301717.0 -0.7
I/LnJ m 1196108.0 0.0   1   0.0 0.0 1196108.0, 1196108.0 -0.88
KK/HlJ m 2547886.0 0.0   1   0.0 0.0 2547886.0, 2547886.0 1.38
LG/J m 1231333.0 0.0   1   0.0 0.0 1231333.0, 1231333.0 -0.82
LP/J m 1665261.0 0.0   1   0.0 0.0 1665261.0, 1665261.0 -0.09
MA/MyJ m 1497558.0 0.0   1   0.0 0.0 1497558.0, 1497558.0 -0.38
NOD/ShiLtJ m 1816394.0 0.0   1   0.0 0.0 1816394.0, 1816394.0 0.16
NON/ShiLtJ m 1119826.0 0.0   1   0.0 0.0 1119826.0, 1119826.0 -1.01
NZW/LacJ m 2736638.0 0.0   1   0.0 0.0 2736638.0, 2736638.0 1.7
PL/J m 1652908.0 0.0   1   0.0 0.0 1652908.0, 1652908.0 -0.12
RIIIS/J m 1464336.0 0.0   1   0.0 0.0 1464336.0, 1464336.0 -0.43
SEA/GnJ m 1517859.0 0.0   1   0.0 0.0 1517859.0, 1517859.0 -0.34
SJL/J m 1721652.0 0.0   1   0.0 0.0 1721652.0, 1721652.0 0.0
SM/J m 1053332.0 0.0   1   0.0 0.0 1053332.0, 1053332.0 -1.12
SWR/J m 1911476.0 0.0   1   0.0 0.0 1911476.0, 1911476.0 0.32


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 1342662.6 582395.322 2526232.2953 159092.9047
AXB19b/PgnJ m 1318892.7 582395.322 2502462.3953 135323.0047
AXB24/PgnJ m 1657286.6 582395.322 2840856.2953 473716.9047
BALB/cJ m 2081480.1 475523.7891 3047860.7095 1115099.4905
BXA16/PgnJ m 1896431.65 582395.322 3080001.3453 712861.9547
BXD19/TyJ m 1277377.7 582395.322 2460947.3953 93808.0047
BXD28/TyJ m 1209350.8 582395.322 2392920.4953 25781.1047
BXH4/TyJ m 1418871.8 582395.322 2602441.4953 235302.1047
C3H/HeJ m 1918263.65 582395.322 3101833.3453 734693.9547
C57BL/6J m 1896303.58 368339.1432 2644858.7814 1147748.3786
CXB11/HiAJ m 1650876.95 582395.322 2834446.6453 467307.2547
CXB12/HiAJ m 2141160.65 582395.322 3324730.3453 957590.9547
CXB13/HiAJ m 2307019.3333 475523.7891 3273399.9429 1340638.7238
CXB1/ByJ m 2219660.8667 475523.7891 3186041.4762 1253280.2571
CXB2/ByJ m 2767681.6333 475523.7891 3734062.2429 1801301.0238
CXB3/ByJ m 1829165.2 582395.322 3012734.8953 645595.5047
CXB4/ByJ m 2104140.8 582395.322 3287710.4953 920571.1047
CXB6/ByJ m 1557263.1 475523.7891 2523643.7095 590882.4905
CXB7/ByJ m 2331844.5 582395.322 3515414.1953 1148274.8047
CXB8/HiAJ m 2867742.6667 475523.7891 3834123.2762 1901362.0571
CXB9/HiAJ m 4318556.0333 475523.7891 5284936.6429 3352175.4238
DBA/2J m 998863.2 411815.6815 1835773.3576 161953.0424




  GWAS USING LINEAR MIXED MODELS

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