Project measure / variable:   HMDPpheno8   dihomo_linolenate

ID, description, units MPD:50323   dihomo_linolenate   dihomo-linolenate (20:3n3 or n6) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - dihomo-linolenate (20:3n3 or n6) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means1721716   None
Median of the strain means1648688   None
SD of the strain means± 596878
Coefficient of variation (CV)0.347
Min–max range of strain means700425   –   4318556   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 30868078782271.6 1469908513441.5 2.1668 0.0217
Residuals 34 23064533151305.5 678368622097.22


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 1881505.0 0.0   1   0.0 0.0 1881505.0, 1881505.0 0.27
A/J m 1342663.0 239170.0   2   169119.0 0.178 1173544.0, 1511781.0 -0.64
AKR/J m 1655211.0 0.0   1   0.0 0.0 1655211.0, 1655211.0 -0.11
AXB10/PgnJ m 1159296.0 0.0   1   0.0 0.0 1159296.0, 1159296.0 -0.94
AXB12/PgnJ m 1456768.0 0.0   1   0.0 0.0 1456768.0, 1456768.0 -0.44
AXB13/PgnJ m 1100590.0 0.0   1   0.0 0.0 1100590.0, 1100590.0 -1.04
AXB15/PgnJ m 1222920.0 0.0   1   0.0 0.0 1222920.0, 1222920.0 -0.84
AXB19a/PgnJ m 1258943.0 0.0   1   0.0 0.0 1258943.0, 1258943.0 -0.78
AXB19b/PgnJ m 1318893.0 192154.0   2   135874.0 0.146 1183019.0, 1454766.0 -0.67
AXB19/PgnJ m 1999416.0 0.0   1   0.0 0.0 1999416.0, 1999416.0 0.47
AXB1/PgnJ m 1838899.0 0.0   1   0.0 0.0 1838899.0, 1838899.0 0.2
AXB23/PgnJ m 2487763.0 0.0   1   0.0 0.0 2487763.0, 2487763.0 1.28
AXB24/PgnJ m 1657287.0 12052.0   2   8522.0 0.00727 1648765.0, 1665809.0 -0.11
AXB2/PgnJ m 1682304.0 0.0   1   0.0 0.0 1682304.0, 1682304.0 -0.07
AXB4/PgnJ m 1566426.0 0.0   1   0.0 0.0 1566426.0, 1566426.0 -0.26
AXB5/PgnJ m 1389638.0 0.0   1   0.0 0.0 1389638.0, 1389638.0 -0.56
AXB6/PgnJ m 2159387.0 0.0   1   0.0 0.0 2159387.0, 2159387.0 0.73
AXB8/PgnJ m 1646500.0 0.0   1   0.0 0.0 1646500.0, 1646500.0 -0.13
BALB/cJ m 2081480.0 288749.0   3 166709.0 0.139 1749247.0, 2271924.0 0.6
BTBR T+ Itpr3tf/J m 1351028.0 0.0   1   0.0 0.0 1351028.0, 1351028.0 -0.62
BUB/BnJ m 2287675.0 0.0   1   0.0 0.0 2287675.0, 2287675.0 0.95
BXA11/PgnJ m 1675858.0 0.0   1   0.0 0.0 1675858.0, 1675858.0 -0.08
BXA12/PgnJ m 2056157.0 0.0   1   0.0 0.0 2056157.0, 2056157.0 0.56
BXA13/PgnJ m 1299825.0 0.0   1   0.0 0.0 1299825.0, 1299825.0 -0.71
BXA14/PgnJ m 1619616.0 0.0   1   0.0 0.0 1619616.0, 1619616.0 -0.17
BXA16/PgnJ m 1896432.0 564414.0   2   399101.0 0.298 1497330.0, 2295533.0 0.29
BXA1/PgnJ m 2641909.0 0.0   1   0.0 0.0 2641909.0, 2641909.0 1.54
BXA24/PgnJ m 1959819.0 0.0   1   0.0 0.0 1959819.0, 1959819.0 0.4
BXA25/PgnJ m 1504207.0 0.0   1   0.0 0.0 1504207.0, 1504207.0 -0.36
BXA26/PgnJ m 2770533.0 0.0   1   0.0 0.0 2770533.0, 2770533.0 1.76
BXA2/PgnJ m 2199030.0 0.0   1   0.0 0.0 2199030.0, 2199030.0 0.8
BXA4/PgnJ m 833646.0 0.0   1   0.0 0.0 833646.0, 833646.0 -1.49
BXA7/PgnJ m 1461910.0 0.0   1   0.0 0.0 1461910.0, 1461910.0 -0.44
BXA8/PgnJ m 2778688.0 0.0   1   0.0 0.0 2778688.0, 2778688.0 1.77
BXD11/TyJ m 1119563.0 0.0   1   0.0 0.0 1119563.0, 1119563.0 -1.01
BXD12/TyJ m 1545384.0 0.0   1   0.0 0.0 1545384.0, 1545384.0 -0.3
BXD13/TyJ m 1281248.0 0.0   1   0.0 0.0 1281248.0, 1281248.0 -0.74
BXD14/TyJ m 1475820.0 0.0   1   0.0 0.0 1475820.0, 1475820.0 -0.41
BXD15/TyJ m 954538.0 0.0   1   0.0 0.0 954538.0, 954538.0 -1.29
BXD18/TyJ m 1369477.0 0.0   1   0.0 0.0 1369477.0, 1369477.0 -0.59
BXD19/TyJ m 1277378.0 177187.0   2   125290.0 0.139 1152088.0, 1402668.0 -0.74
BXD1/TyJ m 1615040.0 0.0   1   0.0 0.0 1615040.0, 1615040.0 -0.18
BXD20/TyJ m 1116522.0 0.0   1   0.0 0.0 1116522.0, 1116522.0 -1.01
BXD21/TyJ m 1168103.0 0.0   1   0.0 0.0 1168103.0, 1168103.0 -0.93
BXD22/TyJ m 1216170.0 0.0   1   0.0 0.0 1216170.0, 1216170.0 -0.85
BXD24/TyJ m 955926.0 0.0   1   0.0 0.0 955926.0, 955926.0 -1.28
BXD24/TyJ-Cep290rd16/J m 700425.0 0.0   1   0.0 0.0 700425.0, 700425.0 -1.71
BXD28/TyJ m 1209351.0 107577.0   2   76068.0 0.089 1133282.0, 1285419.0 -0.86
BXD29-Tlr4lps-2J/J m 1808973.0 0.0   1   0.0 0.0 1808973.0, 1808973.0 0.15
BXD2/TyJ m 1787380.0 0.0   1   0.0 0.0 1787380.0, 1787380.0 0.11
BXD32/TyJ m 2498057.0 0.0   1   0.0 0.0 2498057.0, 2498057.0 1.3
BXD33/TyJ m 760988.0 0.0   1   0.0 0.0 760988.0, 760988.0 -1.61
BXD34/TyJ m 1035996.0 0.0   1   0.0 0.0 1035996.0, 1035996.0 -1.15
BXD36/TyJ m 1281816.0 0.0   1   0.0 0.0 1281816.0, 1281816.0 -0.74
BXD38/TyJ m 1164448.0 0.0   1   0.0 0.0 1164448.0, 1164448.0 -0.93
BXD39/TyJ m 2480987.0 0.0   1   0.0 0.0 2480987.0, 2480987.0 1.27
BXD40/TyJ m 1401236.0 0.0   1   0.0 0.0 1401236.0, 1401236.0 -0.54
BXD42/TyJ m 1545304.0 0.0   1   0.0 0.0 1545304.0, 1545304.0 -0.3
BXD5/TyJ m 1741624.0 0.0   1   0.0 0.0 1741624.0, 1741624.0 0.03
BXD6/TyJ m 1678161.0 0.0   1   0.0 0.0 1678161.0, 1678161.0 -0.07
BXD8/TyJ m 1126686.0 0.0   1   0.0 0.0 1126686.0, 1126686.0 -1.0
BXD9/TyJ m 2153688.0 0.0   1   0.0 0.0 2153688.0, 2153688.0 0.72
BXH10/TyJ m 1523671.0 0.0   1   0.0 0.0 1523671.0, 1523671.0 -0.33
BXH19/TyJ m 2385958.0 0.0   1   0.0 0.0 2385958.0, 2385958.0 1.11
BXH20/KccJ m 1513673.0 0.0   1   0.0 0.0 1513673.0, 1513673.0 -0.35
BXH22/KccJ m 2140666.0 0.0   1   0.0 0.0 2140666.0, 2140666.0 0.7
BXH2/TyJ m 1711453.0 0.0   1   0.0 0.0 1711453.0, 1711453.0 -0.02
BXH4/TyJ m 1418872.0 109335.0   2   77311.0 0.0771 1341560.0, 1496183.0 -0.51
BXH6/TyJ m 1259663.0 0.0   1   0.0 0.0 1259663.0, 1259663.0 -0.77
BXH7/TyJ m 1137288.0 0.0   1   0.0 0.0 1137288.0, 1137288.0 -0.98
BXH8/TyJ m 1749688.0 0.0   1   0.0 0.0 1749688.0, 1749688.0 0.05
BXH9/TyJ m 1952782.0 0.0   1   0.0 0.0 1952782.0, 1952782.0 0.39
C3H/HeJ m 1918264.0 935110.0   2   661222.0 0.487 1257041.0, 2579486.0 0.33
C57BL/6J m 1896304.0 412797.0   5 184608.0 0.218 1305536.0, 2434505.0 0.29
C57L/J m 3767931.0 0.0   1   0.0 0.0 3767931.0, 3767931.0 3.43
C58/J m 2146227.0 0.0   1   0.0 0.0 2146227.0, 2146227.0 0.71
CAST/EiJ m 1110008.0 0.0   1   0.0 0.0 1110008.0, 1110008.0 -1.02
CBA/J m 2037490.0 0.0   1   0.0 0.0 2037490.0, 2037490.0 0.53
CE/J m 2591238.0 0.0   1   0.0 0.0 2591238.0, 2591238.0 1.46
CXB11/HiAJ m 1650877.0 71808.0   2   50776.0 0.0435 1600101.0, 1701653.0 -0.12
CXB12/HiAJ m 2141161.0 232570.0   2   164452.0 0.109 1976708.0, 2305613.0 0.7
CXB13/HiAJ m 2307019.0 234025.0   3 135115.0 0.101 2038698.0, 2468936.0 0.98
CXB1/ByJ m 2219661.0 231292.0   3 133536.0 0.104 2048986.0, 2482898.0 0.83
CXB2/ByJ m 2767682.0 689344.0   3 397993.0 0.249 2123560.0, 3494743.0 1.75
CXB3/ByJ m 1829165.0 32566.0   2   23028.0 0.0178 1806137.0, 1852193.0 0.18
CXB4/ByJ m 2104141.0 235412.0   2   166462.0 0.112 1937679.0, 2270602.0 0.64
CXB6/ByJ m 1557263.0 966180.0   3 557825.0 0.62 936318.0, 2670434.0 -0.28
CXB7/ByJ m 2331844.0 525452.0   2   371550.0 0.225 1960294.0, 2703395.0 1.02
CXB8/HiAJ m 2867743.0 1768657.0   3 1021135.0 0.617 1828707.0, 4909906.0 1.92
CXB9/HiAJ m 4318556.0 2360592.0   3 1362888.0 0.547 2508316.0, 6988518.0 4.35
DBA/2J m 998863.0 125379.0   4 62690.0 0.126 917038.0, 1185724.0 -1.21
FVB/NJ m 1301717.0 0.0   1   0.0 0.0 1301717.0, 1301717.0 -0.7
I/LnJ m 1196108.0 0.0   1   0.0 0.0 1196108.0, 1196108.0 -0.88
KK/HlJ m 2547886.0 0.0   1   0.0 0.0 2547886.0, 2547886.0 1.38
LG/J m 1231333.0 0.0   1   0.0 0.0 1231333.0, 1231333.0 -0.82
LP/J m 1665261.0 0.0   1   0.0 0.0 1665261.0, 1665261.0 -0.09
MA/MyJ m 1497558.0 0.0   1   0.0 0.0 1497558.0, 1497558.0 -0.38
NOD/ShiLtJ m 1816394.0 0.0   1   0.0 0.0 1816394.0, 1816394.0 0.16
NON/ShiLtJ m 1119826.0 0.0   1   0.0 0.0 1119826.0, 1119826.0 -1.01
NZW/LacJ m 2736638.0 0.0   1   0.0 0.0 2736638.0, 2736638.0 1.7
PL/J m 1652908.0 0.0   1   0.0 0.0 1652908.0, 1652908.0 -0.12
RIIIS/J m 1464336.0 0.0   1   0.0 0.0 1464336.0, 1464336.0 -0.43
SEA/GnJ m 1517859.0 0.0   1   0.0 0.0 1517859.0, 1517859.0 -0.34
SJL/J m 1721652.0 0.0   1   0.0 0.0 1721652.0, 1721652.0 0.0
SM/J m 1053332.0 0.0   1   0.0 0.0 1053332.0, 1053332.0 -1.12
SWR/J m 1911476.0 0.0   1   0.0 0.0 1911476.0, 1911476.0 0.32


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 1342662.6 582395.322 2526232.2953 159092.9047
AXB19b/PgnJ m 1318892.7 582395.322 2502462.3953 135323.0047
AXB24/PgnJ m 1657286.6 582395.322 2840856.2953 473716.9047
BALB/cJ m 2081480.1 475523.7891 3047860.7095 1115099.4905
BXA16/PgnJ m 1896431.65 582395.322 3080001.3453 712861.9547
BXD19/TyJ m 1277377.7 582395.322 2460947.3953 93808.0047
BXD28/TyJ m 1209350.8 582395.322 2392920.4953 25781.1047
BXH4/TyJ m 1418871.8 582395.322 2602441.4953 235302.1047
C3H/HeJ m 1918263.65 582395.322 3101833.3453 734693.9547
C57BL/6J m 1896303.58 368339.1432 2644858.7814 1147748.3786
CXB11/HiAJ m 1650876.95 582395.322 2834446.6453 467307.2547
CXB12/HiAJ m 2141160.65 582395.322 3324730.3453 957590.9547
CXB13/HiAJ m 2307019.3333 475523.7891 3273399.9429 1340638.7238
CXB1/ByJ m 2219660.8667 475523.7891 3186041.4762 1253280.2571
CXB2/ByJ m 2767681.6333 475523.7891 3734062.2429 1801301.0238
CXB3/ByJ m 1829165.2 582395.322 3012734.8953 645595.5047
CXB4/ByJ m 2104140.8 582395.322 3287710.4953 920571.1047
CXB6/ByJ m 1557263.1 475523.7891 2523643.7095 590882.4905
CXB7/ByJ m 2331844.5 582395.322 3515414.1953 1148274.8047
CXB8/HiAJ m 2867742.6667 475523.7891 3834123.2762 1901362.0571
CXB9/HiAJ m 4318556.0333 475523.7891 5284936.6429 3352175.4238
DBA/2J m 998863.2 411815.6815 1835773.3576 161953.0424




  GWAS USING LINEAR MIXED MODELS