Project measure / variable:   HMDPpheno8   DHA

ID, description, units MPD:50322   DHA   docosahexaenoate (DHA; 22:6n3) (16h fast), relative abundance    
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings


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  STRAIN COMPARISON PLOT
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HMDPpheno8 - docosahexaenoate (DHA; 22:6n3) (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means11959535   None
Median of the strain means11658878   None
SD of the strain means± 2440520
Coefficient of variation (CV)0.204
Min–max range of strain means6028880   –   18971808   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 358539655964755.0 17073316950702.6 1.5725 0.1171
Residuals 34 369161290091208.0 10857685002682.6


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 9630803.0 0.0   1   0.0 0.0 9630803.0, 9630803.0 -0.95
A/J m 10718110.0 753921.0   2   533102.0 0.0703 10185008.0, 11251213.0 -0.51
AKR/J m 7288862.0 0.0   1   0.0 0.0 7288862.0, 7288862.0 -1.91
AXB10/PgnJ m 10326750.0 0.0   1   0.0 0.0 10326750.0, 10326750.0 -0.67
AXB12/PgnJ m 10779857.0 0.0   1   0.0 0.0 10779857.0, 10779857.0 -0.48
AXB13/PgnJ m 8697169.0 0.0   1   0.0 0.0 8697169.0, 8697169.0 -1.34
AXB15/PgnJ m 11268494.0 0.0   1   0.0 0.0 11268494.0, 11268494.0 -0.28
AXB19a/PgnJ m 12628692.0 0.0   1   0.0 0.0 12628692.0, 12628692.0 0.27
AXB19b/PgnJ m 13654832.0 2467575.0   2   1744839.0 0.181 11909993.0, 15399671.0 0.69
AXB19/PgnJ m 14932451.0 0.0   1   0.0 0.0 14932451.0, 14932451.0 1.22
AXB1/PgnJ m 12375215.0 0.0   1   0.0 0.0 12375215.0, 12375215.0 0.17
AXB23/PgnJ m 15546206.0 0.0   1   0.0 0.0 15546206.0, 15546206.0 1.47
AXB24/PgnJ m 10857324.0 186871.0   2   132138.0 0.0172 10725186.0, 10989462.0 -0.45
AXB2/PgnJ m 10973951.0 0.0   1   0.0 0.0 10973951.0, 10973951.0 -0.4
AXB4/PgnJ m 14365304.0 0.0   1   0.0 0.0 14365304.0, 14365304.0 0.99
AXB5/PgnJ m 10129129.0 0.0   1   0.0 0.0 10129129.0, 10129129.0 -0.75
AXB6/PgnJ m 15573854.0 0.0   1   0.0 0.0 15573854.0, 15573854.0 1.48
AXB8/PgnJ m 13603608.0 0.0   1   0.0 0.0 13603608.0, 13603608.0 0.67
BALB/cJ m 14647365.0 1473065.0   3 850474.0 0.101 13017796.0, 15884403.0 1.1
BTBR T+ Itpr3tf/J m 8518314.0 0.0   1   0.0 0.0 8518314.0, 8518314.0 -1.41
BUB/BnJ m 12506475.0 0.0   1   0.0 0.0 12506475.0, 12506475.0 0.22
BXA11/PgnJ m 12531278.0 0.0   1   0.0 0.0 12531278.0, 12531278.0 0.23
BXA12/PgnJ m 10260352.0 0.0   1   0.0 0.0 10260352.0, 10260352.0 -0.7
BXA13/PgnJ m 11729401.0 0.0   1   0.0 0.0 11729401.0, 11729401.0 -0.09
BXA14/PgnJ m 8244522.0 0.0   1   0.0 0.0 8244522.0, 8244522.0 -1.52
BXA16/PgnJ m 11933752.0 1697319.0   2   1200185.0 0.142 10733567.0, 13133938.0 -0.01
BXA1/PgnJ m 13924506.0 0.0   1   0.0 0.0 13924506.0, 13924506.0 0.81
BXA24/PgnJ m 12172543.0 0.0   1   0.0 0.0 12172543.0, 12172543.0 0.09
BXA25/PgnJ m 10341647.0 0.0   1   0.0 0.0 10341647.0, 10341647.0 -0.66
BXA26/PgnJ m 17539570.0 0.0   1   0.0 0.0 17539570.0, 17539570.0 2.29
BXA2/PgnJ m 11923357.0 0.0   1   0.0 0.0 11923357.0, 11923357.0 -0.01
BXA4/PgnJ m 6028880.0 0.0   1   0.0 0.0 6028880.0, 6028880.0 -2.43
BXA7/PgnJ m 9901701.0 0.0   1   0.0 0.0 9901701.0, 9901701.0 -0.84
BXA8/PgnJ m 16009613.0 0.0   1   0.0 0.0 16009613.0, 16009613.0 1.66
BXD11/TyJ m 8925488.0 0.0   1   0.0 0.0 8925488.0, 8925488.0 -1.24
BXD12/TyJ m 14972303.0 0.0   1   0.0 0.0 14972303.0, 14972303.0 1.23
BXD13/TyJ m 11610432.0 0.0   1   0.0 0.0 11610432.0, 11610432.0 -0.14
BXD14/TyJ m 11707324.0 0.0   1   0.0 0.0 11707324.0, 11707324.0 -0.1
BXD15/TyJ m 9011749.0 0.0   1   0.0 0.0 9011749.0, 9011749.0 -1.21
BXD18/TyJ m 11079740.0 0.0   1   0.0 0.0 11079740.0, 11079740.0 -0.36
BXD19/TyJ m 10439326.0 2451060.0   2   1733161.0 0.235 8706165.0, 12172488.0 -0.62
BXD1/TyJ m 13208341.0 0.0   1   0.0 0.0 13208341.0, 13208341.0 0.51
BXD20/TyJ m 14082571.0 0.0   1   0.0 0.0 14082571.0, 14082571.0 0.87
BXD21/TyJ m 11205777.0 0.0   1   0.0 0.0 11205777.0, 11205777.0 -0.31
BXD22/TyJ m 10053661.0 0.0   1   0.0 0.0 10053661.0, 10053661.0 -0.78
BXD24/TyJ m 8764008.0 0.0   1   0.0 0.0 8764008.0, 8764008.0 -1.31
BXD24/TyJ-Cep290rd16/J m 9448522.0 0.0   1   0.0 0.0 9448522.0, 9448522.0 -1.03
BXD28/TyJ m 12262576.0 498545.0   2   352524.0 0.0407 11910051.0, 12615100.0 0.12
BXD29-Tlr4lps-2J/J m 12159181.0 0.0   1   0.0 0.0 12159181.0, 12159181.0 0.08
BXD2/TyJ m 14319222.0 0.0   1   0.0 0.0 14319222.0, 14319222.0 0.97
BXD32/TyJ m 13654351.0 0.0   1   0.0 0.0 13654351.0, 13654351.0 0.69
BXD33/TyJ m 10936621.0 0.0   1   0.0 0.0 10936621.0, 10936621.0 -0.42
BXD34/TyJ m 10916090.0 0.0   1   0.0 0.0 10916090.0, 10916090.0 -0.43
BXD36/TyJ m 10816151.0 0.0   1   0.0 0.0 10816151.0, 10816151.0 -0.47
BXD38/TyJ m 11385145.0 0.0   1   0.0 0.0 11385145.0, 11385145.0 -0.24
BXD39/TyJ m 17017556.0 0.0   1   0.0 0.0 17017556.0, 17017556.0 2.07
BXD40/TyJ m 11154905.0 0.0   1   0.0 0.0 11154905.0, 11154905.0 -0.33
BXD42/TyJ m 13567082.0 0.0   1   0.0 0.0 13567082.0, 13567082.0 0.66
BXD5/TyJ m 12236180.0 0.0   1   0.0 0.0 12236180.0, 12236180.0 0.11
BXD6/TyJ m 11603405.0 0.0   1   0.0 0.0 11603405.0, 11603405.0 -0.15
BXD8/TyJ m 10121185.0 0.0   1   0.0 0.0 10121185.0, 10121185.0 -0.75
BXD9/TyJ m 13619214.0 0.0   1   0.0 0.0 13619214.0, 13619214.0 0.68
BXH10/TyJ m 10972358.0 0.0   1   0.0 0.0 10972358.0, 10972358.0 -0.4
BXH19/TyJ m 10830220.0 0.0   1   0.0 0.0 10830220.0, 10830220.0 -0.46
BXH20/KccJ m 11013359.0 0.0   1   0.0 0.0 11013359.0, 11013359.0 -0.39
BXH22/KccJ m 15753515.0 0.0   1   0.0 0.0 15753515.0, 15753515.0 1.55
BXH2/TyJ m 10683813.0 0.0   1   0.0 0.0 10683813.0, 10683813.0 -0.52
BXH4/TyJ m 11090442.0 1739401.0   2   1229942.0 0.157 9860500.0, 12320384.0 -0.36
BXH6/TyJ m 10186495.0 0.0   1   0.0 0.0 10186495.0, 10186495.0 -0.73
BXH7/TyJ m 10888315.0 0.0   1   0.0 0.0 10888315.0, 10888315.0 -0.44
BXH8/TyJ m 14170217.0 0.0   1   0.0 0.0 14170217.0, 14170217.0 0.91
BXH9/TyJ m 12230114.0 0.0   1   0.0 0.0 12230114.0, 12230114.0 0.11
C3H/HeJ m 11799808.0 4147587.0   2   2932787.0 0.351 8867021.0, 14732595.0 -0.07
C57BL/6J m 12098875.0 1835526.0   5 820872.0 0.152 8869344.0, 13282394.0 0.06
C57L/J m 14716456.0 0.0   1   0.0 0.0 14716456.0, 14716456.0 1.13
C58/J m 12712688.0 0.0   1   0.0 0.0 12712688.0, 12712688.0 0.31
CAST/EiJ m 6190685.0 0.0   1   0.0 0.0 6190685.0, 6190685.0 -2.36
CBA/J m 12771675.0 0.0   1   0.0 0.0 12771675.0, 12771675.0 0.33
CE/J m 13495576.0 0.0   1   0.0 0.0 13495576.0, 13495576.0 0.63
CXB11/HiAJ m 10462666.0 3731870.0   2   2638831.0 0.357 7823836.0, 13101497.0 -0.61
CXB12/HiAJ m 13818642.0 1552552.0   2   1097820.0 0.112 12720822.0, 14916462.0 0.76
CXB13/HiAJ m 14625015.0 1028073.0   3 593558.0 0.0703 13438500.0, 15251009.0 1.09
CXB1/ByJ m 15020785.0 2127837.0   3 1228507.0 0.142 13274032.0, 17390600.0 1.25
CXB2/ByJ m 17165309.0 3288664.0   3 1898711.0 0.192 14222221.0, 20715070.0 2.13
CXB3/ByJ m 12383654.0 1355117.0   2   958212.0 0.109 11425441.0, 13341866.0 0.17
CXB4/ByJ m 16255904.0 1054938.0   2   745954.0 0.0649 15509950.0, 17001858.0 1.76
CXB6/ByJ m 11806677.0 7049060.0   3 4069777.0 0.597 6897328.0, 19883892.0 -0.06
CXB7/ByJ m 12755784.0 1277542.0   2   903358.0 0.1 11852425.0, 13659142.0 0.33
CXB8/HiAJ m 18971808.0 6060843.0   3 3499229.0 0.319 15224521.0, 25964260.0 2.87
CXB9/HiAJ m 17244259.0 6371719.0   3 3678713.0 0.369 11128755.0, 23844504.0 2.17
DBA/2J m 10190627.0 1583798.0   4 791899.0 0.155 8997463.0, 12500206.0 -0.72
FVB/NJ m 7069904.0 0.0   1   0.0 0.0 7069904.0, 7069904.0 -2.0
I/LnJ m 11450027.0 0.0   1   0.0 0.0 11450027.0, 11450027.0 -0.21
KK/HlJ m 11485840.0 0.0   1   0.0 0.0 11485840.0, 11485840.0 -0.19
LG/J m 9819892.0 0.0   1   0.0 0.0 9819892.0, 9819892.0 -0.88
LP/J m 8756068.0 0.0   1   0.0 0.0 8756068.0, 8756068.0 -1.31
MA/MyJ m 9884298.0 0.0   1   0.0 0.0 9884298.0, 9884298.0 -0.85
NOD/ShiLtJ m 13892809.0 0.0   1   0.0 0.0 13892809.0, 13892809.0 0.79
NON/ShiLtJ m 8629145.0 0.0   1   0.0 0.0 8629145.0, 8629145.0 -1.36
NZW/LacJ m 14245114.0 0.0   1   0.0 0.0 14245114.0, 14245114.0 0.94
PL/J m 12349571.0 0.0   1   0.0 0.0 12349571.0, 12349571.0 0.16
RIIIS/J m 10542776.0 0.0   1   0.0 0.0 10542776.0, 10542776.0 -0.58
SEA/GnJ m 11036016.0 0.0   1   0.0 0.0 11036016.0, 11036016.0 -0.38
SJL/J m 9953160.0 0.0   1   0.0 0.0 9953160.0, 9953160.0 -0.82
SM/J m 11368280.0 0.0   1   0.0 0.0 11368280.0, 11368280.0 -0.24
SWR/J m 13080036.0 0.0   1   0.0 0.0 13080036.0, 13080036.0 0.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 10718110.5 2329987.6612 15453215.1313 5983005.8687
AXB19b/PgnJ m 13654832.0 2329987.6612 18389936.6313 8919727.3687
AXB24/PgnJ m 10857324.0 2329987.6612 15592428.6313 6122219.3687
BALB/cJ m 14647365.0 1902426.959 18513561.7418 10781168.2582
BXA16/PgnJ m 11933752.5 2329987.6612 16668857.1313 7198647.8687
BXD19/TyJ m 10439326.5 2329987.6612 15174431.1313 5704221.8687
BXD28/TyJ m 12262575.5 2329987.6612 16997680.1313 7527470.8687
BXH4/TyJ m 11090442.0 2329987.6612 15825546.6313 6355337.3687
C3H/HeJ m 11799808.0 2329987.6612 16534912.6313 7064703.3687
C57BL/6J m 12098875.0 1473613.5859 15093618.1188 9104131.8812
CXB11/HiAJ m 10462666.25 2329987.6612 15197770.8813 5727561.6187
CXB12/HiAJ m 13818642.0 2329987.6612 18553746.6313 9083537.3687
CXB13/HiAJ m 14625015.0 1902426.959 18491211.7418 10758818.2582
CXB1/ByJ m 15020784.6667 1902426.959 18886981.4084 11154587.9249
CXB2/ByJ m 17165308.6667 1902426.959 21031505.4084 13299111.9249
CXB3/ByJ m 12383653.5 2329987.6612 17118758.1313 7648548.8687
CXB4/ByJ m 16255904.0 2329987.6612 20991008.6313 11520799.3687
CXB6/ByJ m 11806676.8333 1902426.959 15672873.5751 7940480.0916
CXB7/ByJ m 12755783.5 2329987.6612 17490888.1313 8020678.8687
CXB8/HiAJ m 18971808.3333 1902426.959 22838005.0751 15105611.5916
CXB9/HiAJ m 17244259.0 1902426.959 21110455.7418 13378062.2582
DBA/2J m 10190626.75 1647550.0753 13538851.3444 6842402.1556




  GWAS USING LINEAR MIXED MODELS