Phenotype measure:   HMDPpheno8   malonylcarnitine

ID, description, units MPD:50314   malonylcarnitine   malonylcarnitine (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   106 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - malonylcarnitine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested106 strains
Mean of the strain means261593   None
Median of the strain means201072   None
SD of the strain means± 190445
Coefficient of variation (CV)0.728
Min–max range of strain means80667   –   1137556   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 824202508301.415 39247738490.5436 5.4964 < 0.0001
Residuals 34 242781197681.095 7140623461.2087


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 231396.0 0.0   1   0.0 0.0 231396.0, 231396.0 -0.16
A/J m 194056.0 19078.0   2   13490.0 0.0983 180566.0, 207546.0 -0.35
AKR/J m 164414.0 0.0   1   0.0 0.0 164414.0, 164414.0 -0.51
AXB10/PgnJ m 207610.0 0.0   1   0.0 0.0 207610.0, 207610.0 -0.28
AXB12/PgnJ m 125030.0 0.0   1   0.0 0.0 125030.0, 125030.0 -0.72
AXB13/PgnJ m 185717.0 0.0   1   0.0 0.0 185717.0, 185717.0 -0.4
AXB15/PgnJ m 176982.0 0.0   1   0.0 0.0 176982.0, 176982.0 -0.44
AXB19a/PgnJ m 137813.0 0.0   1   0.0 0.0 137813.0, 137813.0 -0.65
AXB19b/PgnJ m 167608.0 81999.0   2   57982.0 0.489 109626.0, 225590.0 -0.49
AXB19/PgnJ m 151703.0 0.0   1   0.0 0.0 151703.0, 151703.0 -0.58
AXB1/PgnJ m 178238.0 0.0   1   0.0 0.0 178238.0, 178238.0 -0.44
AXB23/PgnJ m 190177.0 0.0   1   0.0 0.0 190177.0, 190177.0 -0.37
AXB24/PgnJ m 116365.0 33276.0   2   23530.0 0.286 92835.0, 139895.0 -0.76
AXB2/PgnJ m 168828.0 0.0   1   0.0 0.0 168828.0, 168828.0 -0.49
AXB4/PgnJ m 127882.0 0.0   1   0.0 0.0 127882.0, 127882.0 -0.7
AXB5/PgnJ m 121148.0 0.0   1   0.0 0.0 121148.0, 121148.0 -0.74
AXB6/PgnJ m 220760.0 0.0   1   0.0 0.0 220760.0, 220760.0 -0.21
AXB8/PgnJ m 211332.0 0.0   1   0.0 0.0 211332.0, 211332.0 -0.26
BALB/cJ m 232960.0 18990.0   3 10964.0 0.0815 211037.0, 244301.0 -0.15
BTBR T+ Itpr3tf/J m 242792.0 0.0   1   0.0 0.0 242792.0, 242792.0 -0.1
BUB/BnJ m 807563.0 0.0   1   0.0 0.0 807563.0, 807563.0 2.87
BXA11/PgnJ m 173731.0 0.0   1   0.0 0.0 173731.0, 173731.0 -0.46
BXA12/PgnJ m 105891.0 0.0   1   0.0 0.0 105891.0, 105891.0 -0.82
BXA13/PgnJ m 201964.0 0.0   1   0.0 0.0 201964.0, 201964.0 -0.31
BXA14/PgnJ m 166517.0 0.0   1   0.0 0.0 166517.0, 166517.0 -0.5
BXA16/PgnJ m 373789.0 296282.0   2   209503.0 0.793 164286.0, 583293.0 0.59
BXA1/PgnJ m 185342.0 0.0   1   0.0 0.0 185342.0, 185342.0 -0.4
BXA24/PgnJ m 243137.0 0.0   1   0.0 0.0 243137.0, 243137.0 -0.1
BXA25/PgnJ m 202496.0 0.0   1   0.0 0.0 202496.0, 202496.0 -0.31
BXA26/PgnJ m 157399.0 0.0   1   0.0 0.0 157399.0, 157399.0 -0.55
BXA2/PgnJ m 176644.0 0.0   1   0.0 0.0 176644.0, 176644.0 -0.45
BXA4/PgnJ m 129145.0 0.0   1   0.0 0.0 129145.0, 129145.0 -0.7
BXA7/PgnJ m 222704.0 0.0   1   0.0 0.0 222704.0, 222704.0 -0.2
BXA8/PgnJ m 145031.0 0.0   1   0.0 0.0 145031.0, 145031.0 -0.61
BXD11/TyJ m 830477.0 0.0   1   0.0 0.0 830477.0, 830477.0 2.99
BXD12/TyJ m 178569.0 0.0   1   0.0 0.0 178569.0, 178569.0 -0.44
BXD13/TyJ m 145021.0 0.0   1   0.0 0.0 145021.0, 145021.0 -0.61
BXD14/TyJ m 138120.0 0.0   1   0.0 0.0 138120.0, 138120.0 -0.65
BXD15/TyJ m 937802.0 0.0   1   0.0 0.0 937802.0, 937802.0 3.55
BXD18/TyJ m 189762.0 0.0   1   0.0 0.0 189762.0, 189762.0 -0.38
BXD19/TyJ m 347249.0 193251.0   2   136649.0 0.557 210600.0, 483898.0 0.45
BXD1/TyJ m 695778.0 0.0   1   0.0 0.0 695778.0, 695778.0 2.28
BXD20/TyJ m 607022.0 0.0   1   0.0 0.0 607022.0, 607022.0 1.81
BXD21/TyJ m 651299.0 0.0   1   0.0 0.0 651299.0, 651299.0 2.05
BXD22/TyJ m 604607.0 0.0   1   0.0 0.0 604607.0, 604607.0 1.8
BXD24/TyJ m 550181.0 0.0   1   0.0 0.0 550181.0, 550181.0 1.52
BXD24/TyJ-Cep290rd16/J m 442304.0 0.0   1   0.0 0.0 442304.0, 442304.0 0.95
BXD28/TyJ m 151762.0 2441.0   2   1726.0 0.0161 150036.0, 153489.0 -0.58
BXD29-Tlr4lps-2J/J m 501641.0 0.0   1   0.0 0.0 501641.0, 501641.0 1.26
BXD2/TyJ m 202578.0 0.0   1   0.0 0.0 202578.0, 202578.0 -0.31
BXD32/TyJ m 139870.0 0.0   1   0.0 0.0 139870.0, 139870.0 -0.64
BXD33/TyJ m 439909.0 0.0   1   0.0 0.0 439909.0, 439909.0 0.94
BXD34/TyJ m 388925.0 0.0   1   0.0 0.0 388925.0, 388925.0 0.67
BXD36/TyJ m 104896.0 0.0   1   0.0 0.0 104896.0, 104896.0 -0.82
BXD38/TyJ m 391050.0 0.0   1   0.0 0.0 391050.0, 391050.0 0.68
BXD39/TyJ m 1137556.0 0.0   1   0.0 0.0 1137556.0, 1137556.0 4.6
BXD40/TyJ m 200804.0 0.0   1   0.0 0.0 200804.0, 200804.0 -0.32
BXD42/TyJ m 340923.0 0.0   1   0.0 0.0 340923.0, 340923.0 0.42
BXD5/TyJ m 622772.0 0.0   1   0.0 0.0 622772.0, 622772.0 1.9
BXD6/TyJ m 231082.0 0.0   1   0.0 0.0 231082.0, 231082.0 -0.16
BXD8/TyJ m 332622.0 0.0   1   0.0 0.0 332622.0, 332622.0 0.37
BXD9/TyJ m 80667.0 0.0   1   0.0 0.0 80667.0, 80667.0 -0.95
BXH10/TyJ m 147272.0 0.0   1   0.0 0.0 147272.0, 147272.0 -0.6
BXH19/TyJ m 137076.0 0.0   1   0.0 0.0 137076.0, 137076.0 -0.65
BXH20/KccJ m 201340.0 0.0   1   0.0 0.0 201340.0, 201340.0 -0.32
BXH22/KccJ m 126985.0 0.0   1   0.0 0.0 126985.0, 126985.0 -0.71
BXH2/TyJ m 208318.0 0.0   1   0.0 0.0 208318.0, 208318.0 -0.28
BXH4/TyJ m 198534.0 14757.0   2   10435.0 0.0743 188099.0, 208969.0 -0.33
BXH6/TyJ m 113785.0 0.0   1   0.0 0.0 113785.0, 113785.0 -0.78
BXH7/TyJ m 168962.0 0.0   1   0.0 0.0 168962.0, 168962.0 -0.49
BXH8/TyJ m 129290.0 0.0   1   0.0 0.0 129290.0, 129290.0 -0.69
BXH9/TyJ m 156504.0 0.0   1   0.0 0.0 156504.0, 156504.0 -0.55
C3H/HeJ m 193320.0 77425.0   2   54748.0 0.401 138572.0, 248068.0 -0.36
C57BL/6J m 224549.0 53165.0   5 23776.0 0.237 149642.0, 290978.0 -0.19
C57L/J m 291128.0 0.0   1   0.0 0.0 291128.0, 291128.0 0.16
C58/J m 293748.0 0.0   1   0.0 0.0 293748.0, 293748.0 0.17
CAST/EiJ m 114524.0 0.0   1   0.0 0.0 114524.0, 114524.0 -0.77
CBA/J m 232909.0 0.0   1   0.0 0.0 232909.0, 232909.0 -0.15
CE/J m 276380.0 0.0   1   0.0 0.0 276380.0, 276380.0 0.08
CXB11/HiAJ m 135969.0 1463.0   2   1035.0 0.0108 134935.0, 137004.0 -0.66
CXB12/HiAJ m 163133.0 68732.0   2   48601.0 0.421 114532.0, 211734.0 -0.52
CXB13/HiAJ m 165230.0 98014.0   3 56588.0 0.593 85458.0, 274643.0 -0.51
CXB1/ByJ m 257711.0 51432.0   3 29694.0 0.2 202045.0, 303467.0 -0.02
CXB2/ByJ m 131068.0 15660.0   3 9041.0 0.119 121154.0, 149121.0 -0.69
CXB3/ByJ m 222776.0 26926.0   2   19039.0 0.121 203737.0, 241815.0 -0.2
CXB4/ByJ m 244637.0 43575.0   2   30812.0 0.178 213825.0, 275449.0 -0.09
CXB6/ByJ m 144700.0 21548.0   3 12441.0 0.149 126852.0, 168638.0 -0.61
CXB7/ByJ m 207393.0 32490.0   2   22974.0 0.157 184420.0, 230367.0 -0.28
CXB8/HiAJ m 222186.0 46778.0   3 27007.0 0.211 192109.0, 276079.0 -0.21
CXB9/HiAJ m 200117.0 92038.0   3 53138.0 0.46 108772.0, 292833.0 -0.32
DBA/2J m 619157.0 108879.0   4 54440.0 0.176 500504.0, 723475.0 1.88
FVB/NJ m 155361.0 0.0   1   0.0 0.0 155361.0, 155361.0 -0.56
I/LnJ m 224252.0 0.0   1   0.0 0.0 224252.0, 224252.0 -0.2
KK/HlJ m 215893.0 0.0   1   0.0 0.0 215893.0, 215893.0 -0.24
LG/J m 120682.0 0.0   1   0.0 0.0 120682.0, 120682.0 -0.74
LP/J m 135018.0 0.0   1   0.0 0.0 135018.0, 135018.0 -0.66
MA/MyJ m 205797.0 0.0   1   0.0 0.0 205797.0, 205797.0 -0.29
NOD/ShiLtJ m 217578.0 0.0   1   0.0 0.0 217578.0, 217578.0 -0.23
NON/ShiLtJ m 355160.0 0.0   1   0.0 0.0 355160.0, 355160.0 0.49
NZW/LacJ m 287870.0 0.0   1   0.0 0.0 287870.0, 287870.0 0.14
PL/J m 208508.0 0.0   1   0.0 0.0 208508.0, 208508.0 -0.28
RIIIS/J m 115763.0 0.0   1   0.0 0.0 115763.0, 115763.0 -0.77
SEA/GnJ m 186500.0 0.0   1   0.0 0.0 186500.0, 186500.0 -0.39
SJL/J m 123431.0 0.0   1   0.0 0.0 123431.0, 123431.0 -0.73
SM/J m 594329.0 0.0   1   0.0 0.0 594329.0, 594329.0 1.75
SWR/J m 224556.0 0.0   1   0.0 0.0 224556.0, 224556.0 -0.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 194055.85 59752.0856 315486.6978 72625.0022
AXB19b/PgnJ m 167608.1 59752.0856 289038.9478 46177.2522
AXB24/PgnJ m 116365.0 59752.0856 237795.8478 0.0
BALB/cJ m 232959.8667 48787.3736 332107.7387 133811.9946
BXA16/PgnJ m 373789.4 59752.0856 495220.2478 252358.5522
BXD19/TyJ m 347249.1 59752.0856 468679.9478 225818.2522
BXD28/TyJ m 151762.4 59752.0856 273193.2478 30331.5522
BXH4/TyJ m 198534.05 59752.0856 319964.8978 77103.2022
C3H/HeJ m 193319.9 59752.0856 314750.7478 71889.0522
C57BL/6J m 224549.38 37790.5371 301348.9915 147749.7685
CXB11/HiAJ m 135969.45 59752.0856 257400.2978 14538.6022
CXB12/HiAJ m 163132.85 59752.0856 284563.6978 41702.0022
CXB13/HiAJ m 165229.9 48787.3736 264377.7721 66082.0279
CXB1/ByJ m 257710.9333 48787.3736 356858.8054 158563.0613
CXB2/ByJ m 131067.9667 48787.3736 230215.8387 31920.0946
CXB3/ByJ m 222776.0 59752.0856 344206.8478 101345.1522
CXB4/ByJ m 244636.9 59752.0856 366067.7478 123206.0522
CXB6/ByJ m 144700.4667 48787.3736 243848.3387 45552.5946
CXB7/ByJ m 207393.2 59752.0856 328824.0478 85962.3522
CXB8/HiAJ m 222185.8333 48787.3736 321333.7054 123037.9613
CXB9/HiAJ m 200116.5333 48787.3736 299264.4054 100968.6613
DBA/2J m 619156.775 42251.1049 705021.3509 533292.1991




  GWAS USING LINEAR MIXED MODELS