Phenotype measure:   HMDPpheno8   acetylcarnitine

ID, description, units MPD:50311   acetylcarnitine   acetylcarnitine (16h fast), relative abundance  
Data set, strains HMDPpheno8   HMDP   103 strains     sex: m     age: 16wks
Procedure metabolite quantification
Ontology mappings

  STRAIN COMPARISON PLOT
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HMDPpheno8 - acetylcarnitine (16h fast), relative abundance



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested103 strains
Mean of the strain means161981   None
Median of the strain means144479   None
SD of the strain means± 78238
Coefficient of variation (CV)0.483
Min–max range of strain means32726   –   525631   None
Mean sample size per strain1.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 21 209946955764.78 9997474084.0371 1.6513 0.0941
Residuals 34 205850264955.25 6054419557.5074


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129X1/SvJ m 95952.0 0.0   1   0.0 0.0 95952.0, 95952.0 -0.84
A/J m 209996.0 21108.0   2   14925.0 0.101 195070.0, 224921.0 0.61
AKR/J m 104218.0 0.0   1   0.0 0.0 104218.0, 104218.0 -0.74
AXB10/PgnJ m 145823.0 0.0   1   0.0 0.0 145823.0, 145823.0 -0.21
AXB12/PgnJ m 114939.0 0.0   1   0.0 0.0 114939.0, 114939.0 -0.6
AXB13/PgnJ m 119906.0 0.0   1   0.0 0.0 119906.0, 119906.0 -0.54
AXB15/PgnJ m 177234.0 0.0   1   0.0 0.0 177234.0, 177234.0 0.19
AXB19a/PgnJ m 167310.0 0.0   1   0.0 0.0 167310.0, 167310.0 0.07
AXB19b/PgnJ m 228529.0 35352.0   2   24997.0 0.155 203532.0, 253526.0 0.85
AXB19/PgnJ m 211768.0 0.0   1   0.0 0.0 211768.0, 211768.0 0.64
AXB1/PgnJ m 280489.0 0.0   1   0.0 0.0 280489.0, 280489.0 1.51
AXB23/PgnJ m 150852.0 0.0   1   0.0 0.0 150852.0, 150852.0 -0.14
AXB24/PgnJ m 112816.0 1855.0   2   1312.0 0.0164 111504.0, 114128.0 -0.63
AXB2/PgnJ m 306375.0 0.0   1   0.0 0.0 306375.0, 306375.0 1.85
AXB4/PgnJ m 144784.0 0.0   1   0.0 0.0 144784.0, 144784.0 -0.22
AXB5/PgnJ m 80197.0 0.0   1   0.0 0.0 80197.0, 80197.0 -1.05
AXB6/PgnJ m 70926.0 0.0   1   0.0 0.0 70926.0, 70926.0 -1.16
AXB8/PgnJ m 208222.0 0.0   1   0.0 0.0 208222.0, 208222.0 0.59
BALB/cJ m 144479.0 48490.0   3 27996.0 0.336 116268.0, 200471.0 -0.22
BTBR T+ Itpr3tf/J m 105971.0 0.0   1   0.0 0.0 105971.0, 105971.0 -0.72
BUB/BnJ m 453579.0 0.0   1   0.0 0.0 453579.0, 453579.0 3.73
BXA11/PgnJ m 200013.0 0.0   1   0.0 0.0 200013.0, 200013.0 0.49
BXA12/PgnJ m 234275.0 0.0   1   0.0 0.0 234275.0, 234275.0 0.92
BXA13/PgnJ m 171091.0 0.0   1   0.0 0.0 171091.0, 171091.0 0.12
BXA14/PgnJ m 142818.0 0.0   1   0.0 0.0 142818.0, 142818.0 -0.24
BXA16/PgnJ m 157436.0 75101.0   2   53104.0 0.477 104331.0, 210540.0 -0.06
BXA1/PgnJ m 129979.0 0.0   1   0.0 0.0 129979.0, 129979.0 -0.41
BXA24/PgnJ m 88622.0 0.0   1   0.0 0.0 88622.0, 88622.0 -0.94
BXA25/PgnJ m 198880.0 0.0   1   0.0 0.0 198880.0, 198880.0 0.47
BXA2/PgnJ m 103053.0 0.0   1   0.0 0.0 103053.0, 103053.0 -0.75
BXA4/PgnJ m 221048.0 0.0   1   0.0 0.0 221048.0, 221048.0 0.75
BXA7/PgnJ m 32726.0 0.0   1   0.0 0.0 32726.0, 32726.0 -1.65
BXA8/PgnJ m 160751.0 0.0   1   0.0 0.0 160751.0, 160751.0 -0.02
BXD11/TyJ m 284221.0 0.0   1   0.0 0.0 284221.0, 284221.0 1.56
BXD12/TyJ m 132330.0 0.0   1   0.0 0.0 132330.0, 132330.0 -0.38
BXD13/TyJ m 132031.0 0.0   1   0.0 0.0 132031.0, 132031.0 -0.38
BXD14/TyJ m 83655.0 0.0   1   0.0 0.0 83655.0, 83655.0 -1.0
BXD15/TyJ m 140907.0 0.0   1   0.0 0.0 140907.0, 140907.0 -0.27
BXD18/TyJ m 136583.0 0.0   1   0.0 0.0 136583.0, 136583.0 -0.32
BXD19/TyJ m 92309.0 7475.0   2   5286.0 0.081 87023.0, 97595.0 -0.89
BXD1/TyJ m 162640.0 0.0   1   0.0 0.0 162640.0, 162640.0 0.01
BXD20/TyJ m 94918.0 0.0   1   0.0 0.0 94918.0, 94918.0 -0.86
BXD21/TyJ m 136649.0 0.0   1   0.0 0.0 136649.0, 136649.0 -0.32
BXD22/TyJ m 146102.0 0.0   1   0.0 0.0 146102.0, 146102.0 -0.2
BXD24/TyJ m 169898.0 0.0   1   0.0 0.0 169898.0, 169898.0 0.1
BXD24/TyJ-Cep290rd16/J m 117161.0 0.0   1   0.0 0.0 117161.0, 117161.0 -0.57
BXD28/TyJ m 94379.0 15383.0   2   10878.0 0.163 83501.0, 105256.0 -0.86
BXD29-Tlr4lps-2J/J m 167936.0 0.0   1   0.0 0.0 167936.0, 167936.0 0.08
BXD2/TyJ m 133003.0 0.0   1   0.0 0.0 133003.0, 133003.0 -0.37
BXD32/TyJ m 115606.0 0.0   1   0.0 0.0 115606.0, 115606.0 -0.59
BXD33/TyJ m 160722.0 0.0   1   0.0 0.0 160722.0, 160722.0 -0.02
BXD34/TyJ m 225193.0 0.0   1   0.0 0.0 225193.0, 225193.0 0.81
BXD38/TyJ m 441956.0 0.0   1   0.0 0.0 441956.0, 441956.0 3.58
BXD39/TyJ m 102777.0 0.0   1   0.0 0.0 102777.0, 102777.0 -0.76
BXD40/TyJ m 80381.0 0.0   1   0.0 0.0 80381.0, 80381.0 -1.04
BXD42/TyJ m 138451.0 0.0   1   0.0 0.0 138451.0, 138451.0 -0.3
BXD5/TyJ m 100055.0 0.0   1   0.0 0.0 100055.0, 100055.0 -0.79
BXD6/TyJ m 105125.0 0.0   1   0.0 0.0 105125.0, 105125.0 -0.73
BXD8/TyJ m 225593.0 0.0   1   0.0 0.0 225593.0, 225593.0 0.81
BXH10/TyJ m 142217.0 0.0   1   0.0 0.0 142217.0, 142217.0 -0.25
BXH19/TyJ m 99925.0 0.0   1   0.0 0.0 99925.0, 99925.0 -0.79
BXH20/KccJ m 122900.0 0.0   1   0.0 0.0 122900.0, 122900.0 -0.5
BXH22/KccJ m 107448.0 0.0   1   0.0 0.0 107448.0, 107448.0 -0.7
BXH2/TyJ m 79832.0 0.0   1   0.0 0.0 79832.0, 79832.0 -1.05
BXH4/TyJ m 78545.0 25462.0   2   18004.0 0.324 60541.0, 96550.0 -1.07
BXH6/TyJ m 140589.0 0.0   1   0.0 0.0 140589.0, 140589.0 -0.27
BXH7/TyJ m 86321.0 0.0   1   0.0 0.0 86321.0, 86321.0 -0.97
BXH8/TyJ m 95933.0 0.0   1   0.0 0.0 95933.0, 95933.0 -0.84
BXH9/TyJ m 194823.0 0.0   1   0.0 0.0 194823.0, 194823.0 0.42
C3H/HeJ m 158665.0 36940.0   2   26120.0 0.233 132544.0, 184785.0 -0.04
C57BL/6J m 271435.0 117190.0   5 52409.0 0.432 188765.0, 476294.0 1.4
C57L/J m 229992.0 0.0   1   0.0 0.0 229992.0, 229992.0 0.87
C58/J m 201139.0 0.0   1   0.0 0.0 201139.0, 201139.0 0.5
CAST/EiJ m 151058.0 0.0   1   0.0 0.0 151058.0, 151058.0 -0.14
CBA/J m 95811.0 0.0   1   0.0 0.0 95811.0, 95811.0 -0.85
CE/J m 109238.0 0.0   1   0.0 0.0 109238.0, 109238.0 -0.67
CXB11/HiAJ m 227115.0 2719.0   2   1922.0 0.012 225193.0, 229037.0 0.83
CXB12/HiAJ m 115997.0 36685.0   2   25940.0 0.316 90057.0, 141937.0 -0.59
CXB13/HiAJ m 175482.0 43774.0   3 25273.0 0.249 145221.0, 225675.0 0.17
CXB1/ByJ m 152647.0 41263.0   3 23823.0 0.27 105892.0, 183969.0 -0.12
CXB2/ByJ m 310956.0 220163.0   3 127111.0 0.708 118499.0, 551031.0 1.9
CXB3/ByJ m 186345.0 60938.0   2   43090.0 0.327 143255.0, 229434.0 0.31
CXB4/ByJ m 92983.0 1649.0   2   1166.0 0.0177 91817.0, 94149.0 -0.88
CXB6/ByJ m 193864.0 101728.0   3 58733.0 0.525 119255.0, 309741.0 0.41
CXB7/ByJ m 140727.0 28816.0   2   20376.0 0.205 120351.0, 161103.0 -0.27
CXB8/HiAJ m 147754.0 41124.0   3 23743.0 0.278 118715.0, 194812.0 -0.18
CXB9/HiAJ m 124703.0 21748.0   3 12556.0 0.174 101148.0, 144020.0 -0.48
DBA/2J m 143683.0 22085.0   4 11042.0 0.154 111857.0, 161046.0 -0.23
FVB/NJ m 525631.0 0.0   1   0.0 0.0 525631.0, 525631.0 4.65
I/LnJ m 234355.0 0.0   1   0.0 0.0 234355.0, 234355.0 0.93
KK/HlJ m 159818.0 0.0   1   0.0 0.0 159818.0, 159818.0 -0.03
LG/J m 158599.0 0.0   1   0.0 0.0 158599.0, 158599.0 -0.04
LP/J m 122189.0 0.0   1   0.0 0.0 122189.0, 122189.0 -0.51
MA/MyJ m 131509.0 0.0   1   0.0 0.0 131509.0, 131509.0 -0.39
NOD/ShiLtJ m 239804.0 0.0   1   0.0 0.0 239804.0, 239804.0 0.99
NON/ShiLtJ m 160446.0 0.0   1   0.0 0.0 160446.0, 160446.0 -0.02
NZW/LacJ m 149874.0 0.0   1   0.0 0.0 149874.0, 149874.0 -0.15
PL/J m 276889.0 0.0   1   0.0 0.0 276889.0, 276889.0 1.47
RIIIS/J m 250240.0 0.0   1   0.0 0.0 250240.0, 250240.0 1.13
SEA/GnJ m 96009.0 0.0   1   0.0 0.0 96009.0, 96009.0 -0.84
SJL/J m 99808.0 0.0   1   0.0 0.0 99808.0, 99808.0 -0.79
SM/J m 164810.0 0.0   1   0.0 0.0 164810.0, 164810.0 0.04
SWR/J m 140294.0 0.0   1   0.0 0.0 140294.0, 140294.0 -0.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 209995.8 55020.0852 321810.0661 98181.5339
AXB19b/PgnJ m 228528.95 55020.0852 340343.2161 116714.6839
AXB24/PgnJ m 112816.25 55020.0852 224630.5161 1001.9839
BALB/cJ m 144479.4333 44923.7115 235775.3993 53183.4674
BXA16/PgnJ m 157435.85 55020.0852 269250.1161 45621.5839
BXD19/TyJ m 92308.95 55020.0852 204123.2161 0.0
BXD28/TyJ m 94378.8 55020.0852 206193.0661 0.0
BXH4/TyJ m 78545.45 55020.0852 190359.7161 0.0
C3H/HeJ m 158664.6 55020.0852 270478.8661 46850.3339
C57BL/6J m 271435.18 34797.7573 342152.7312 200717.6288
CXB11/HiAJ m 227115.0 55020.0852 338929.2661 115300.7339
CXB12/HiAJ m 115997.25 55020.0852 227811.5161 4182.9839
CXB13/HiAJ m 175481.9333 44923.7115 266777.8993 84185.9674
CXB1/ByJ m 152646.5667 44923.7115 243942.5326 61350.6007
CXB2/ByJ m 310956.0333 44923.7115 402251.9993 219660.0674
CXB3/ByJ m 186344.9 55020.0852 298159.1661 74530.6339
CXB4/ByJ m 92983.0 55020.0852 204797.2661 0.0
CXB6/ByJ m 193863.9333 44923.7115 285159.8993 102567.9674
CXB7/ByJ m 140727.35 55020.0852 252541.6161 28913.0839
CXB8/HiAJ m 147753.6333 44923.7115 239049.5993 56457.6674
CXB9/HiAJ m 124702.8 44923.7115 215998.766 33406.834
DBA/2J m 143683.075 38905.0754 222747.7008 64618.4492




  GWAS USING LINEAR MIXED MODELS