Project measure / variable:   HMDPpheno5   PLT

ID, description, units MPD:48985   PLT   platelet count (PLT; units per volume x 103)   [n/µL]  
Data set, strains HMDPpheno5   HMDP w/par   83 strains     sex: m     age: 16wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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HMDPpheno5 - platelet count (PLT; units per volume x 103)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested83 strains
Mean of the strain means280   n/µL
Median of the strain means292   n/µL
SD of the strain means± 97.2
Coefficient of variation (CV)0.347
Min–max range of strain means77.0   –   494   n/µL
Mean sample size per strain2.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 82 1982357.9961 24175.0975 1.8888 0.0004
Residuals 150 1919827.6948 12798.8513


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 170.0 37.5   2   26.5 0.22 144.0, 197.0 -1.13
AXB10/PgnJ m 248.0 95.5   2   67.5 0.386 180.0, 315.0 -0.33
AXB12/PgnJ m 168.0 98.3   2   69.5 0.587 98.0, 237.0 -1.16
AXB13/PgnJ m 328.0 34.6   2   24.5 0.106 303.0, 352.0 0.49
AXB15/PgnJ m 79.5 17.7   2   12.5 0.222 67.0, 92.0 -2.07
AXB19b/PgnJ m 256.0 210.0   4 105.0 0.823 64.0, 468.0 -0.25
AXB19/PgnJ m 336.0 83.4   2   59.0 0.248 277.0, 395.0 0.57
AXB23/PgnJ m 261.0 4.24   2   3.0 0.0163 258.0, 264.0 -0.2
AXB2/PgnJ m 256.0 292.0   2   206.0 1.14 50.0, 463.0 -0.25
AXB4/PgnJ m 212.0 46.0   2   32.5 0.216 180.0, 245.0 -0.7
AXB5/PgnJ m 192.0 42.4   2   30.0 0.221 162.0, 222.0 -0.91
AXB6/PgnJ m 369.0 146.0   2   103.0 0.395 266.0, 472.0 0.91
AXB8/PgnJ m 146.0 107.0   2   76.0 0.736 70.0, 222.0 -1.38
BALB/cJ m 494.0 17.7   2   12.5 0.0357 482.0, 507.0 2.2
BTBR T+ Itpr3tf/J m 238.0 13.4   2   9.5 0.0563 229.0, 248.0 -0.44
BXA11/PgnJ m 248.0 166.0   2   118.0 0.669 131.0, 366.0 -0.33
BXA12/PgnJ m 156.0 16.3   2   11.5 0.104 145.0, 168.0 -1.28
BXA13/PgnJ m 362.0 67.2   2   47.5 0.186 314.0, 409.0 0.84
BXA14/PgnJ m 274.0 238.0   2   168.0 0.868 106.0, 443.0 -0.06
BXA16/PgnJ m 234.0 87.5   3 50.5 0.373 148.0, 323.0 -0.48
BXA24/PgnJ m 366.0 159.0   2   112.0 0.434 254.0, 479.0 0.88
BXA25/PgnJ m 77.0 45.3   2   32.0 0.588 45.0, 109.0 -2.09
BXA26/PgnJ m 298.0 92.6   2   65.5 0.311 232.0, 363.0 0.18
BXA2/PgnJ m 357.0 19.8   2   14.0 0.0555 343.0, 371.0 0.79
BXA4/PgnJ m 258.0 240.0   2   170.0 0.931 88.0, 427.0 -0.23
BXA7/PgnJ m 488.0 156.0   2   110.0 0.321 377.0, 598.0 2.14
BXA8/PgnJ m 220.0 35.4   2   25.0 0.161 195.0, 245.0 -0.62
BXD12/TyJ m 270.0 33.2   2   23.5 0.123 246.0, 293.0 -0.11
BXD13/TyJ m 227.0 48.1   2   34.0 0.212 193.0, 261.0 -0.55
BXD14/TyJ m 326.0 309.0   2   218.0 0.946 108.0, 545.0 0.47
BXD15/TyJ m 368.0 58.0   2   41.0 0.158 327.0, 409.0 0.9
BXD19/TyJ m 292.0 111.0   4 55.3 0.379 157.0, 424.0 0.12
BXD20/TyJ m 330.0 175.0   2   123.0 0.53 206.0, 453.0 0.51
BXD22/TyJ m 176.0 117.0   2   82.5 0.665 93.0, 258.0 -1.07
BXD24/TyJ m 217.0 143.0   2   101.0 0.658 116.0, 318.0 -0.65
BXD24/TyJ-Cep290rd16/J m 214.0 8.49   2   6.0 0.0397 208.0, 220.0 -0.68
BXD28/TyJ m 292.0 103.0   2   72.5 0.352 219.0, 364.0 0.12
BXD29-Tlr4lps-2J/J m 352.0 7.78   2   5.5 0.0221 346.0, 357.0 0.74
BXD2/TyJ m 294.0 233.0   2   164.0 0.793 129.0, 458.0 0.14
BXD33/TyJ m 126.0 20.5   2   14.5 0.163 111.0, 140.0 -1.59
BXD34/TyJ m 212.0 110.0   2   77.5 0.516 135.0, 290.0 -0.7
BXD40/TyJ m 166.0 3.54   2   2.5 0.0214 163.0, 168.0 -1.18
BXD42/TyJ m 410.0 197.0   2   140.0 0.481 271.0, 550.0 1.33
BXD5/TyJ m 244.0 99.0   2   70.0 0.406 174.0, 314.0 -0.37
BXD6/TyJ m 318.0 78.5   2   55.5 0.246 263.0, 374.0 0.39
BXD8/TyJ m 329.0 75.0   2   53.0 0.228 276.0, 382.0 0.5
BXD9/TyJ m 302.0 161.0   2   114.0 0.534 188.0, 416.0 0.22
BXH19/TyJ m 354.0 109.0   2   77.0 0.308 277.0, 431.0 0.76
BXH20/KccJ m 226.0 1.41   2   1.0 0.00626 225.0, 227.0 -0.56
BXH2/TyJ m 149.0 5.66   2   4.0 0.038 145.0, 153.0 -1.35
BXH4/TyJ m 400.0 141.0   4 70.6 0.354 206.0, 543.0 1.23
BXH6/TyJ m 200.0 117.0   2   82.5 0.582 118.0, 283.0 -0.83
BXH7/TyJ m 87.5 46.0   2   32.5 0.525 55.0, 120.0 -1.98
BXH8/TyJ m 481.0 19.8   2   14.0 0.0412 467.0, 495.0 2.06
BXH9/TyJ m 247.0 139.0   2   98.0 0.561 149.0, 345.0 -0.34
C57BL/6J m 138.0 85.0   3 49.1 0.614 59.0, 228.0 -1.46
C57L/J m 292.0 34.6   2   24.5 0.119 267.0, 316.0 0.12
C58/J m 308.0 247.0   2   175.0 0.804 133.0, 483.0 0.28
CAST/EiJ m 336.0 97.6   2   69.0 0.29 267.0, 405.0 0.57
CE/J m 148.0 107.0   2   75.5 0.724 72.0, 223.0 -1.36
CXB11/HiAJ m 368.0 88.3   8 31.2 0.24 256.0, 485.0 0.9
CXB12/HiAJ m 347.0 58.7   8 20.8 0.169 284.0, 456.0 0.69
CXB13/HiAJ m 343.0 85.8   8 30.3 0.25 233.0, 515.0 0.64
CXB1/ByJ m 324.0 68.5   8 24.2 0.212 221.0, 406.0 0.45
CXB2/ByJ m 373.0 104.0   6 42.3 0.278 227.0, 508.0 0.95
CXB3/ByJ m 304.0 79.9   9 26.6 0.263 169.0, 429.0 0.24
CXB4/ByJ m 280.0 112.0   8 39.5 0.399 83.0, 384.0 0.0
CXB6/ByJ m 488.0 109.0   7 41.1 0.222 302.0, 605.0 2.14
CXB7/ByJ m 320.0 126.0   7 47.8 0.394 156.0, 497.0 0.41
CXB8/HiAJ m 437.0 170.0   5 76.0 0.389 248.0, 685.0 1.61
CXB9/HiAJ m 302.0 105.0   7 39.8 0.349 122.0, 449.0 0.22
DBA/2J m 233.0 83.4   2   59.0 0.358 174.0, 292.0 -0.49
FVB/NJ m 398.0 147.0   2   104.0 0.37 294.0, 502.0 1.21
KK/HlJ m 146.0 20.5   2   14.5 0.141 131.0, 160.0 -1.38
LG/J m 295.0 148.0   2   105.0 0.503 190.0, 400.0 0.15
LP/J m 157.0 36.8   2   26.0 0.234 131.0, 183.0 -1.27
MA/MyJ m 461.0 42.4   2   30.0 0.092 431.0, 491.0 1.86
NZW/LacJ m 294.0 189.0   2   133.0 0.641 161.0, 428.0 0.14
PL/J m 171.0 90.5   2   64.0 0.529 107.0, 235.0 -1.12
RIIIS/J m 270.0 34.6   2   24.5 0.128 246.0, 295.0 -0.11
SEA/GnJ m 328.0 62.9   2   44.5 0.192 284.0, 373.0 0.49
SJL/J m 268.0 141.0   2   99.5 0.524 169.0, 368.0 -0.13
SM/J m 436.0 116.0   2   82.0 0.266 354.0, 518.0 1.6


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 170.5 79.9964 328.5653 12.4347
AXB10/PgnJ m 247.5 79.9964 405.5653 89.4347
AXB12/PgnJ m 167.5 79.9964 325.5653 9.4347
AXB13/PgnJ m 327.5 79.9964 485.5653 169.4347
AXB15/PgnJ m 79.5 79.9964 237.5653 0.0
AXB19b/PgnJ m 255.5 56.566 367.2691 143.7309
AXB19/PgnJ m 336.0 79.9964 494.0653 177.9347
AXB23/PgnJ m 261.0 79.9964 419.0653 102.9347
AXB2/PgnJ m 256.5 79.9964 414.5653 98.4347
AXB4/PgnJ m 212.5 79.9964 370.5653 54.4347
AXB5/PgnJ m 192.0 79.9964 350.0653 33.9347
AXB6/PgnJ m 369.0 79.9964 527.0653 210.9347
AXB8/PgnJ m 146.0 79.9964 304.0653 0.0
BALB/cJ m 494.5 79.9964 652.5653 336.4347
BTBR T+ Itpr3tf/J m 238.5 79.9964 396.5653 80.4347
BXA11/PgnJ m 248.5 79.9964 406.5653 90.4347
BXA12/PgnJ m 156.5 79.9964 314.5653 0.0
BXA13/PgnJ m 361.5 79.9964 519.5653 203.4347
BXA14/PgnJ m 274.5 79.9964 432.5653 116.4347
BXA16/PgnJ m 234.3333 65.3168 363.3931 105.2735
BXA24/PgnJ m 366.5 79.9964 524.5653 208.4347
BXA25/PgnJ m 77.0 79.9964 235.0653 0.0
BXA26/PgnJ m 297.5 79.9964 455.5653 139.4347
BXA2/PgnJ m 357.0 79.9964 515.0653 198.9347
BXA4/PgnJ m 257.5 79.9964 415.5653 99.4347
BXA7/PgnJ m 487.5 79.9964 645.5653 329.4347
BXA8/PgnJ m 220.0 79.9964 378.0653 61.9347
BXD12/TyJ m 269.5 79.9964 427.5653 111.4347
BXD13/TyJ m 227.0 79.9964 385.0653 68.9347
BXD14/TyJ m 326.5 79.9964 484.5653 168.4347
BXD15/TyJ m 368.0 79.9964 526.0653 209.9347
BXD19/TyJ m 292.25 56.566 404.0191 180.4809
BXD20/TyJ m 329.5 79.9964 487.5653 171.4347
BXD22/TyJ m 175.5 79.9964 333.5653 17.4347
BXD24/TyJ m 217.0 79.9964 375.0653 58.9347
BXD24/TyJ-Cep290rd16/J m 214.0 79.9964 372.0653 55.9347
BXD28/TyJ m 291.5 79.9964 449.5653 133.4347
BXD29-Tlr4lps-2J/J m 351.5 79.9964 509.5653 193.4347
BXD2/TyJ m 293.5 79.9964 451.5653 135.4347
BXD33/TyJ m 125.5 79.9964 283.5653 0.0
BXD34/TyJ m 212.5 79.9964 370.5653 54.4347
BXD40/TyJ m 165.5 79.9964 323.5653 7.4347
BXD42/TyJ m 410.5 79.9964 568.5653 252.4347
BXD5/TyJ m 244.0 79.9964 402.0653 85.9347
BXD6/TyJ m 318.5 79.9964 476.5653 160.4347
BXD8/TyJ m 329.0 79.9964 487.0653 170.9347
BXD9/TyJ m 302.0 79.9964 460.0653 143.9347
BXH19/TyJ m 354.0 79.9964 512.0653 195.9347
BXH20/KccJ m 226.0 79.9964 384.0653 67.9347
BXH2/TyJ m 149.0 79.9964 307.0653 0.0
BXH4/TyJ m 399.5 56.566 511.2691 287.7309
BXH6/TyJ m 200.5 79.9964 358.5653 42.4347
BXH7/TyJ m 87.5 79.9964 245.5653 0.0
BXH8/TyJ m 481.0 79.9964 639.0653 322.9347
BXH9/TyJ m 247.0 79.9964 405.0653 88.9347
C57BL/6J m 138.3333 65.3168 267.3931 9.2735
C57L/J m 291.5 79.9964 449.5653 133.4347
C58/J m 308.0 79.9964 466.0653 149.9347
CAST/EiJ m 336.0 79.9964 494.0653 177.9347
CE/J m 147.5 79.9964 305.5653 0.0
CXB11/HiAJ m 368.5 39.9982 447.5327 289.4673
CXB12/HiAJ m 346.75 39.9982 425.7827 267.7173
CXB13/HiAJ m 342.875 39.9982 421.9077 263.8423
CXB1/ByJ m 323.5 39.9982 402.5327 244.4673
CXB2/ByJ m 373.0 46.1859 464.2591 281.7409
CXB3/ByJ m 303.5556 37.7107 378.0683 229.0428
CXB4/ByJ m 279.75 39.9982 358.7827 200.7173
CXB6/ByJ m 488.2857 42.7599 572.7752 403.7962
CXB7/ByJ m 320.2857 42.7599 404.7752 235.7962
CXB8/HiAJ m 436.8 50.5942 536.7693 336.8307
CXB9/HiAJ m 301.8571 42.7599 386.3466 217.3677
DBA/2J m 233.0 79.9964 391.0653 74.9347
FVB/NJ m 398.0 79.9964 556.0653 239.9347
KK/HlJ m 145.5 79.9964 303.5653 0.0
LG/J m 295.0 79.9964 453.0653 136.9347
LP/J m 157.0 79.9964 315.0653 0.0
MA/MyJ m 461.0 79.9964 619.0653 302.9347
NZW/LacJ m 294.5 79.9964 452.5653 136.4347
PL/J m 171.0 79.9964 329.0653 12.9347
RIIIS/J m 270.5 79.9964 428.5653 112.4347
SEA/GnJ m 328.5 79.9964 486.5653 170.4347
SJL/J m 268.5 79.9964 426.5653 110.4347
SM/J m 436.0 79.9964 594.0653 277.9347




  GWAS USING LINEAR MIXED MODELS