Project measure / variable:   HMDPpheno5   HCT

ID, description, units MPD:48979   HCT   hematocrit (HCT)   [%]  
Data set, strains HMDPpheno5   HMDP w/par   83 strains     sex: m     age: 16wks
Procedure complete blood count
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

HMDPpheno5 - hematocrit (HCT)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested83 strains
Mean of the strain means37.5   %
Median of the strain means37.5   %
SD of the strain means± 7.54
Coefficient of variation (CV)0.201
Min–max range of strain means17.6   –   54.3   %
Mean sample size per strain2.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 82 14313.915 174.5599 4.4471 < 0.0001
Residuals 150 5887.8292 39.2522


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 29.2 5.02   2   3.55 0.172 25.6, 32.7 -1.11
AXB10/PgnJ m 29.9 0.707   2   0.5 0.0236 29.4, 30.4 -1.01
AXB12/PgnJ m 35.8 5.87   2   4.15 0.164 31.6, 39.9 -0.23
AXB13/PgnJ m 43.6 4.81   2   3.4 0.11 40.2, 47.0 0.8
AXB15/PgnJ m 24.4 2.9   2   2.05 0.119 22.3, 26.4 -1.74
AXB19b/PgnJ m 30.3 11.2   4 5.61 0.37 18.4, 40.8 -0.96
AXB19/PgnJ m 36.7 3.39   2   2.4 0.0925 34.3, 39.1 -0.11
AXB23/PgnJ m 34.2 19.0   2   13.4 0.554 20.8, 47.6 -0.44
AXB2/PgnJ m 29.5 28.1   2   19.9 0.95 9.7, 49.4 -1.07
AXB4/PgnJ m 34.7 8.56   2   6.05 0.247 28.6, 40.7 -0.38
AXB5/PgnJ m 38.6 1.2   2   0.85 0.0311 37.8, 39.5 0.14
AXB6/PgnJ m 49.0 0.0707   2   0.05 0.00144 49.0, 49.1 1.52
AXB8/PgnJ m 34.6 6.65   2   4.7 0.192 29.9, 39.3 -0.39
BALB/cJ m 45.3 4.24   2   3.0 0.0937 42.3, 48.3 1.03
BTBR T+ Itpr3tf/J m 41.7 1.41   2   1.0 0.0339 40.7, 42.7 0.55
BXA11/PgnJ m 39.9 5.16   2   3.65 0.13 36.2, 43.5 0.31
BXA12/PgnJ m 32.6 6.58   2   4.65 0.201 28.0, 37.3 -0.66
BXA13/PgnJ m 48.0 0.849   2   0.6 0.0177 47.4, 48.6 1.39
BXA14/PgnJ m 37.1 9.48   2   6.7 0.255 30.4, 43.8 -0.06
BXA16/PgnJ m 27.2 13.6   3 7.84 0.499 12.0, 38.1 -1.37
BXA24/PgnJ m 37.0 1.77   2   1.25 0.0478 35.7, 38.2 -0.07
BXA25/PgnJ m 21.1 9.33   2   6.6 0.442 14.5, 27.7 -2.18
BXA26/PgnJ m 45.2 5.02   2   3.55 0.111 41.7, 48.8 1.02
BXA2/PgnJ m 37.5 2.4   2   1.7 0.0641 35.8, 39.2 -0.01
BXA4/PgnJ m 34.2 10.9   2   7.7 0.318 26.5, 41.9 -0.44
BXA7/PgnJ m 40.0 2.05   2   1.45 0.0512 38.6, 41.5 0.33
BXA8/PgnJ m 35.9 5.44   2   3.85 0.152 32.0, 39.7 -0.22
BXD12/TyJ m 38.1 1.06   2   0.75 0.0278 37.4, 38.9 0.07
BXD13/TyJ m 35.3 7.07   2   5.0 0.2 30.3, 40.3 -0.3
BXD14/TyJ m 39.6 10.4   2   7.35 0.262 32.3, 47.0 0.27
BXD15/TyJ m 37.5 1.27   2   0.9 0.0339 36.6, 38.4 -0.01
BXD19/TyJ m 40.2 2.2   4 1.1 0.0548 37.6, 42.2 0.35
BXD20/TyJ m 41.5 2.69   2   1.9 0.0647 39.6, 43.4 0.52
BXD22/TyJ m 32.3 17.0   2   12.0 0.525 20.3, 44.3 -0.7
BXD24/TyJ m 35.5 12.5   2   8.85 0.352 26.7, 44.4 -0.27
BXD24/TyJ-Cep290rd16/J m 35.5 0.495   2   0.35 0.0139 35.2, 35.9 -0.27
BXD28/TyJ m 41.7 2.76   2   1.95 0.0662 39.7, 43.6 0.55
BXD29-Tlr4lps-2J/J m 34.7 0.778   2   0.55 0.0224 34.1, 35.2 -0.38
BXD2/TyJ m 24.9 14.4   2   10.2 0.579 14.7, 35.1 -1.68
BXD33/TyJ m 26.8 1.63   2   1.15 0.0608 25.6, 27.9 -1.43
BXD34/TyJ m 40.5 5.94   2   4.2 0.147 36.3, 44.7 0.39
BXD40/TyJ m 24.1 2.26   2   1.6 0.0939 22.5, 25.7 -1.78
BXD42/TyJ m 46.3 5.02   2   3.55 0.108 42.8, 49.9 1.16
BXD5/TyJ m 36.8 3.89   2   2.75 0.106 34.0, 39.5 -0.1
BXD6/TyJ m 39.7 4.88   2   3.45 0.123 36.2, 43.1 0.29
BXD8/TyJ m 34.4 3.68   2   2.6 0.107 31.8, 37.0 -0.42
BXD9/TyJ m 36.7 13.6   2   9.6 0.37 27.1, 46.3 -0.11
BXH19/TyJ m 29.1 6.58   2   4.65 0.226 24.5, 33.8 -1.12
BXH20/KccJ m 31.8 2.12   2   1.5 0.0667 30.3, 33.3 -0.76
BXH2/TyJ m 26.5 7.28   2   5.15 0.275 21.3, 31.6 -1.47
BXH4/TyJ m 42.7 8.44   4 4.22 0.198 30.1, 48.0 0.68
BXH6/TyJ m 33.0 8.06   2   5.7 0.244 27.3, 38.7 -0.6
BXH7/TyJ m 17.6 2.55   2   1.8 0.145 15.8, 19.4 -2.65
BXH8/TyJ m 43.0 0.0707   2   0.05 0.00164 43.0, 43.1 0.72
BXH9/TyJ m 37.8 4.74   2   3.35 0.125 34.4, 41.1 0.03
C57BL/6J m 24.9 8.9   3 5.14 0.357 18.2, 35.0 -1.68
C57L/J m 39.2 2.19   2   1.55 0.056 37.6, 40.7 0.22
C58/J m 36.5 12.1   2   8.55 0.332 27.9, 45.0 -0.14
CAST/EiJ m 50.7 2.19   2   1.55 0.0433 49.1, 52.2 1.75
CE/J m 33.9 0.354   2   0.25 0.0104 33.6, 34.1 -0.48
CXB11/HiAJ m 41.9 3.08   8 1.09 0.0737 38.3, 46.7 0.58
CXB12/HiAJ m 53.7 3.08   8 1.09 0.0574 48.7, 58.6 2.14
CXB13/HiAJ m 54.3 2.4   8 0.847 0.0441 51.3, 58.0 2.22
CXB1/ByJ m 40.5 1.59   8 0.561 0.0392 38.2, 42.6 0.39
CXB2/ByJ m 43.3 5.71   6 2.33 0.132 34.7, 49.7 0.76
CXB3/ByJ m 47.1 7.79   9 2.6 0.165 28.1, 54.7 1.27
CXB4/ByJ m 45.1 1.11   8 0.391 0.0246 43.7, 47.1 1.0
CXB6/ByJ m 38.3 3.95   7 1.49 0.103 31.4, 42.8 0.1
CXB7/ByJ m 45.0 0.608   7 0.23 0.0135 44.2, 45.8 0.99
CXB8/HiAJ m 51.3 3.72   5 1.66 0.0725 45.0, 54.6 1.82
CXB9/HiAJ m 40.1 3.27   7 1.24 0.0815 34.9, 44.7 0.34
DBA/2J m 38.7 7.14   2   5.05 0.185 33.6, 43.7 0.15
FVB/NJ m 33.0 0.0707   2   0.05 0.00215 32.9, 33.0 -0.6
KK/HlJ m 28.0 1.84   2   1.3 0.0657 26.7, 29.3 -1.27
LG/J m 49.4 7.64   2   5.4 0.155 44.0, 54.8 1.57
LP/J m 46.5 2.19   2   1.55 0.0471 45.0, 48.1 1.19
MA/MyJ m 39.6 2.12   2   1.5 0.0536 38.1, 41.1 0.27
NZW/LacJ m 38.9 12.6   2   8.9 0.324 30.0, 47.8 0.18
PL/J m 33.6 4.81   2   3.4 0.143 30.2, 37.0 -0.52
RIIIS/J m 34.9 0.495   2   0.35 0.0142 34.5, 35.2 -0.35
SEA/GnJ m 52.0 6.08   2   4.3 0.117 47.7, 56.3 1.92
SJL/J m 33.1 4.81   2   3.4 0.145 29.7, 36.5 -0.59
SM/J m 46.0 4.31   2   3.05 0.0939 42.9, 49.0 1.12


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 29.15 4.4301 37.9035 20.3965
AXB10/PgnJ m 29.9 4.4301 38.6535 21.1465
AXB12/PgnJ m 35.75 4.4301 44.5035 26.9965
AXB13/PgnJ m 43.6 4.4301 52.3535 34.8465
AXB15/PgnJ m 24.35 4.4301 33.1035 15.5965
AXB19b/PgnJ m 30.3 3.1326 36.4897 24.1103
AXB19/PgnJ m 36.7 4.4301 45.4535 27.9465
AXB23/PgnJ m 34.2 4.4301 42.9535 25.4465
AXB2/PgnJ m 29.55 4.4301 38.3035 20.7965
AXB4/PgnJ m 34.65 4.4301 43.4035 25.8965
AXB5/PgnJ m 38.65 4.4301 47.4035 29.8965
AXB6/PgnJ m 49.05 4.4301 57.8035 40.2965
AXB8/PgnJ m 34.6 4.4301 43.3535 25.8465
BALB/cJ m 45.3 4.4301 54.0535 36.5465
BTBR T+ Itpr3tf/J m 41.7 4.4301 50.4535 32.9465
BXA11/PgnJ m 39.85 4.4301 48.6035 31.0965
BXA12/PgnJ m 32.65 4.4301 41.4035 23.8965
BXA13/PgnJ m 48.0 4.4301 56.7535 39.2465
BXA14/PgnJ m 37.1 4.4301 45.8535 28.3465
BXA16/PgnJ m 27.2333 3.6172 34.3806 20.0861
BXA24/PgnJ m 36.95 4.4301 45.7035 28.1965
BXA25/PgnJ m 21.1 4.4301 29.8535 12.3465
BXA26/PgnJ m 45.25 4.4301 54.0035 36.4965
BXA2/PgnJ m 37.5 4.4301 46.2535 28.7465
BXA4/PgnJ m 34.2 4.4301 42.9535 25.4465
BXA7/PgnJ m 40.05 4.4301 48.8035 31.2965
BXA8/PgnJ m 35.85 4.4301 44.6035 27.0965
BXD12/TyJ m 38.15 4.4301 46.9035 29.3965
BXD13/TyJ m 35.3 4.4301 44.0535 26.5465
BXD14/TyJ m 39.65 4.4301 48.4035 30.8965
BXD15/TyJ m 37.5 4.4301 46.2535 28.7465
BXD19/TyJ m 40.175 3.1326 46.3647 33.9853
BXD20/TyJ m 41.5 4.4301 50.2535 32.7465
BXD22/TyJ m 32.3 4.4301 41.0535 23.5465
BXD24/TyJ m 35.55 4.4301 44.3035 26.7965
BXD24/TyJ-Cep290rd16/J m 35.55 4.4301 44.3035 26.7965
BXD28/TyJ m 41.65 4.4301 50.4035 32.8965
BXD29-Tlr4lps-2J/J m 34.65 4.4301 43.4035 25.8965
BXD2/TyJ m 24.9 4.4301 33.6535 16.1465
BXD33/TyJ m 26.75 4.4301 35.5035 17.9965
BXD34/TyJ m 40.5 4.4301 49.2535 31.7465
BXD40/TyJ m 24.1 4.4301 32.8535 15.3465
BXD42/TyJ m 46.35 4.4301 55.1035 37.5965
BXD5/TyJ m 36.75 4.4301 45.5035 27.9965
BXD6/TyJ m 39.65 4.4301 48.4035 30.8965
BXD8/TyJ m 34.4 4.4301 43.1535 25.6465
BXD9/TyJ m 36.7 4.4301 45.4535 27.9465
BXH19/TyJ m 29.15 4.4301 37.9035 20.3965
BXH20/KccJ m 31.8 4.4301 40.5535 23.0465
BXH2/TyJ m 26.45 4.4301 35.2035 17.6965
BXH4/TyJ m 42.7 3.1326 48.8897 36.5103
BXH6/TyJ m 33.0 4.4301 41.7535 24.2465
BXH7/TyJ m 17.6 4.4301 26.3535 8.8465
BXH8/TyJ m 43.05 4.4301 51.8035 34.2965
BXH9/TyJ m 37.75 4.4301 46.5035 28.9965
C57BL/6J m 24.9 3.6172 32.0472 17.7528
C57L/J m 39.15 4.4301 47.9035 30.3965
C58/J m 36.45 4.4301 45.2035 27.6965
CAST/EiJ m 50.65 4.4301 59.4035 41.8965
CE/J m 33.85 4.4301 42.6035 25.0965
CXB11/HiAJ m 41.85 2.2151 46.2268 37.4732
CXB12/HiAJ m 53.7 2.2151 58.0768 49.3232
CXB13/HiAJ m 54.325 2.2151 58.7018 49.9482
CXB1/ByJ m 40.5 2.2151 44.8768 36.1232
CXB2/ByJ m 43.2667 2.5577 48.3205 38.2128
CXB3/ByJ m 47.0889 2.0884 51.2153 42.9624
CXB4/ByJ m 45.075 2.2151 49.4518 40.6982
CXB6/ByJ m 38.3429 2.368 43.0218 33.6639
CXB7/ByJ m 45.0429 2.368 49.7218 40.3639
CXB8/HiAJ m 51.3 2.8019 56.8362 45.7638
CXB9/HiAJ m 40.1143 2.368 44.7932 35.4353
DBA/2J m 38.65 4.4301 47.4035 29.8965
FVB/NJ m 32.95 4.4301 41.7035 24.1965
KK/HlJ m 28.0 4.4301 36.7535 19.2465
LG/J m 49.4 4.4301 58.1535 40.6465
LP/J m 46.55 4.4301 55.3035 37.7965
MA/MyJ m 39.6 4.4301 48.3535 30.8465
NZW/LacJ m 38.9 4.4301 47.6535 30.1465
PL/J m 33.6 4.4301 42.3535 24.8465
RIIIS/J m 34.85 4.4301 43.6035 26.0965
SEA/GnJ m 52.0 4.4301 60.7535 43.2465
SJL/J m 33.1 4.4301 41.8535 24.3465
SM/J m 45.95 4.4301 54.7035 37.1965




  GWAS USING LINEAR MIXED MODELS