Project measure / variable:   HMDPpheno5   HGB

ID, description, units MPD:48973   HGB   hemoglobin (HGB)   [g/dL]  
Data set, strains HMDPpheno5   HMDP w/par   83 strains     sex: m     age: 16wks
Procedure complete blood count
Ontology mappings

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  STRAIN COMPARISON PLOT
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HMDPpheno5 - hemoglobin (HGB)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested83 strains
Mean of the strain means12.6   g/dL
Median of the strain means12.8   g/dL
SD of the strain means± 2.04
Coefficient of variation (CV)0.162
Min–max range of strain means6.80   –   16.6   g/dL
Mean sample size per strain2.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 82 1083.4438 13.2127 3.921 < 0.0001
Residuals 150 505.4649 3.3698


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 9.3 1.56   2   1.1 0.167 8.2, 10.4 -1.62
AXB10/PgnJ m 10.7 0.283   2   0.2 0.0264 10.5, 10.9 -0.93
AXB12/PgnJ m 11.6 1.48   2   1.05 0.129 10.5, 12.6 -0.49
AXB13/PgnJ m 13.6 1.27   2   0.9 0.0936 12.7, 14.5 0.49
AXB15/PgnJ m 9.2 1.27   2   0.9 0.138 8.3, 10.1 -1.67
AXB19b/PgnJ m 11.2 3.64   4 1.82 0.324 7.2, 14.4 -0.69
AXB19/PgnJ m 13.4 1.13   2   0.8 0.0844 12.6, 14.2 0.39
AXB23/PgnJ m 10.6 5.52   2   3.9 0.52 6.7, 14.5 -0.98
AXB2/PgnJ m 9.55 8.56   2   6.05 0.896 3.5, 15.6 -1.5
AXB4/PgnJ m 13.1 2.76   2   1.95 0.21 11.2, 15.1 0.24
AXB5/PgnJ m 11.8 0.141   2   0.1 0.012 11.7, 11.9 -0.4
AXB6/PgnJ m 15.2 0.354   2   0.25 0.0232 15.0, 15.5 1.27
AXB8/PgnJ m 12.7 2.33   2   1.65 0.184 11.0, 14.3 0.05
BALB/cJ m 13.9 1.34   2   0.95 0.0963 13.0, 14.9 0.63
BTBR T+ Itpr3tf/J m 12.9 0.141   2   0.1 0.011 12.8, 13.0 0.14
BXA11/PgnJ m 12.4 1.34   2   0.95 0.109 11.4, 13.3 -0.1
BXA12/PgnJ m 11.5 1.84   2   1.3 0.16 10.2, 12.8 -0.54
BXA13/PgnJ m 15.1 0.283   2   0.2 0.0187 14.9, 15.3 1.22
BXA14/PgnJ m 11.6 2.4   2   1.7 0.207 9.9, 13.3 -0.49
BXA16/PgnJ m 10.2 4.75   3 2.74 0.464 4.9, 14.0 -1.18
BXA24/PgnJ m 13.1 0.636   2   0.45 0.0484 12.7, 13.6 0.24
BXA25/PgnJ m 7.9 2.55   2   1.8 0.322 6.1, 9.7 -2.3
BXA26/PgnJ m 13.8 1.2   2   0.85 0.0868 13.0, 14.7 0.58
BXA2/PgnJ m 13.4 0.495   2   0.35 0.0368 13.1, 13.8 0.39
BXA4/PgnJ m 11.1 2.76   2   1.95 0.247 9.2, 13.1 -0.74
BXA7/PgnJ m 13.1 0.636   2   0.45 0.0488 12.6, 13.5 0.24
BXA8/PgnJ m 12.8 1.91   2   1.35 0.149 11.5, 14.2 0.09
BXD12/TyJ m 11.6 0.0707   2   0.05 0.00612 11.5, 11.6 -0.49
BXD13/TyJ m 11.3 1.98   2   1.4 0.175 9.9, 12.7 -0.64
BXD14/TyJ m 12.9 2.47   2   1.75 0.191 11.2, 14.7 0.14
BXD15/TyJ m 11.9 0.424   2   0.3 0.0357 11.6, 12.2 -0.35
BXD19/TyJ m 13.2 0.451   4 0.225 0.034 12.9, 13.9 0.29
BXD20/TyJ m 14.9 1.2   2   0.85 0.0804 14.1, 15.8 1.12
BXD22/TyJ m 13.0 3.96   2   2.8 0.305 10.2, 15.8 0.19
BXD24/TyJ m 12.8 2.33   2   1.65 0.182 11.2, 14.5 0.09
BXD24/TyJ-Cep290rd16/J m 11.6 0.354   2   0.25 0.0306 11.3, 11.8 -0.49
BXD28/TyJ m 13.2 0.636   2   0.45 0.048 12.8, 13.7 0.29
BXD29-Tlr4lps-2J/J m 12.6 0.354   2   0.25 0.0282 12.3, 12.8 0.0
BXD2/TyJ m 9.4 4.81   2   3.4 0.512 6.0, 12.8 -1.57
BXD33/TyJ m 9.7 0.707   2   0.5 0.0729 9.2, 10.2 -1.42
BXD34/TyJ m 12.6 1.27   2   0.9 0.101 11.7, 13.5 0.0
BXD40/TyJ m 9.7 0.566   2   0.4 0.0583 9.3, 10.1 -1.42
BXD42/TyJ m 14.5 1.56   2   1.1 0.107 13.4, 15.6 0.93
BXD5/TyJ m 11.8 0.919   2   0.65 0.0776 11.2, 12.5 -0.4
BXD6/TyJ m 14.4 1.56   2   1.1 0.108 13.3, 15.5 0.88
BXD8/TyJ m 12.5 1.27   2   0.9 0.102 11.6, 13.4 -0.05
BXD9/TyJ m 11.3 4.03   2   2.85 0.355 8.5, 14.2 -0.64
BXH19/TyJ m 10.7 2.33   2   1.65 0.219 9.0, 12.3 -0.93
BXH20/KccJ m 11.8 0.919   2   0.65 0.0782 11.1, 12.4 -0.4
BXH2/TyJ m 9.5 2.12   2   1.5 0.223 8.0, 11.0 -1.52
BXH4/TyJ m 13.3 2.23   4 1.12 0.168 10.0, 14.8 0.34
BXH6/TyJ m 11.5 1.13   2   0.8 0.0984 10.7, 12.3 -0.54
BXH7/TyJ m 6.8 0.566   2   0.4 0.0832 6.4, 7.2 -2.84
BXH8/TyJ m 13.1 0.0707   2   0.05 0.00538 13.1, 13.2 0.24
BXH9/TyJ m 11.9 1.34   2   0.95 0.112 11.0, 12.9 -0.35
C57BL/6J m 9.9 2.23   3 1.29 0.226 8.1, 12.4 -1.32
C57L/J m 13.8 0.919   2   0.65 0.0664 13.2, 14.5 0.58
C58/J m 12.8 3.89   2   2.75 0.305 10.0, 15.5 0.09
CAST/EiJ m 14.5 0.424   2   0.3 0.0293 14.2, 14.8 0.93
CE/J m 12.8 0.849   2   0.6 0.0663 12.2, 13.4 0.09
CXB11/HiAJ m 14.8 0.939   8 0.332 0.0634 13.6, 16.1 1.07
CXB12/HiAJ m 16.3 0.794   8 0.281 0.0488 15.3, 18.0 1.81
CXB13/HiAJ m 16.6 0.523   8 0.185 0.0316 15.5, 17.2 1.95
CXB1/ByJ m 14.8 0.778   8 0.275 0.0524 13.9, 15.8 1.07
CXB2/ByJ m 15.6 1.86   6 0.761 0.12 13.0, 17.7 1.46
CXB3/ByJ m 14.5 2.17   9 0.723 0.149 9.1, 16.3 0.93
CXB4/ByJ m 15.8 0.484   8 0.171 0.0306 15.1, 16.7 1.56
CXB6/ByJ m 13.7 1.26   7 0.478 0.092 11.6, 15.3 0.53
CXB7/ByJ m 16.4 0.283   7 0.107 0.0172 15.9, 16.8 1.85
CXB8/HiAJ m 15.9 1.33   5 0.596 0.0839 13.7, 17.0 1.61
CXB9/HiAJ m 14.0 0.966   7 0.365 0.069 12.4, 15.2 0.68
DBA/2J m 11.8 1.84   2   1.3 0.156 10.5, 13.1 -0.4
FVB/NJ m 10.1 0.0707   2   0.05 0.00697 10.1, 10.2 -1.23
KK/HlJ m 10.8 0.566   2   0.4 0.0524 10.4, 11.2 -0.88
LG/J m 15.4 2.05   2   1.45 0.133 14.0, 16.9 1.37
LP/J m 14.1 0.495   2   0.35 0.0352 13.7, 14.4 0.73
MA/MyJ m 14.2 0.849   2   0.6 0.0598 13.6, 14.8 0.78
NZW/LacJ m 12.2 3.32   2   2.35 0.274 9.8, 14.5 -0.2
PL/J m 11.0 1.13   2   0.8 0.103 10.2, 11.8 -0.79
RIIIS/J m 12.6 0.212   2   0.15 0.0169 12.4, 12.7 0.0
SEA/GnJ m 16.0 0.99   2   0.7 0.0619 15.3, 16.7 1.66
SJL/J m 11.9 1.48   2   1.05 0.124 10.9, 13.0 -0.35
SM/J m 15.9 1.34   2   0.95 0.0842 15.0, 16.9 1.61


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 9.3 1.298 11.8648 6.7352
AXB10/PgnJ m 10.7 1.298 13.2648 8.1352
AXB12/PgnJ m 11.55 1.298 14.1148 8.9852
AXB13/PgnJ m 13.6 1.298 16.1648 11.0352
AXB15/PgnJ m 9.2 1.298 11.7648 6.6352
AXB19b/PgnJ m 11.225 0.9178 13.0386 9.4114
AXB19/PgnJ m 13.4 1.298 15.9648 10.8352
AXB23/PgnJ m 10.6 1.298 13.1648 8.0352
AXB2/PgnJ m 9.55 1.298 12.1148 6.9852
AXB4/PgnJ m 13.15 1.298 15.7148 10.5852
AXB5/PgnJ m 11.8 1.298 14.3648 9.2352
AXB6/PgnJ m 15.25 1.298 17.8148 12.6852
AXB8/PgnJ m 12.65 1.298 15.2148 10.0852
BALB/cJ m 13.95 1.298 16.5148 11.3852
BTBR T+ Itpr3tf/J m 12.9 1.298 15.4648 10.3352
BXA11/PgnJ m 12.35 1.298 14.9148 9.7852
BXA12/PgnJ m 11.5 1.298 14.0648 8.9352
BXA13/PgnJ m 15.1 1.298 17.6648 12.5352
BXA14/PgnJ m 11.6 1.298 14.1648 9.0352
BXA16/PgnJ m 10.2333 1.0598 12.3275 8.1392
BXA24/PgnJ m 13.15 1.298 15.7148 10.5852
BXA25/PgnJ m 7.9 1.298 10.4648 5.3352
BXA26/PgnJ m 13.85 1.298 16.4148 11.2852
BXA2/PgnJ m 13.45 1.298 16.0148 10.8852
BXA4/PgnJ m 11.15 1.298 13.7148 8.5852
BXA7/PgnJ m 13.05 1.298 15.6148 10.4852
BXA8/PgnJ m 12.85 1.298 15.4148 10.2852
BXD12/TyJ m 11.55 1.298 14.1148 8.9852
BXD13/TyJ m 11.3 1.298 13.8648 8.7352
BXD14/TyJ m 12.95 1.298 15.5148 10.3852
BXD15/TyJ m 11.9 1.298 14.4648 9.3352
BXD19/TyJ m 13.25 0.9178 15.0636 11.4364
BXD20/TyJ m 14.95 1.298 17.5148 12.3852
BXD22/TyJ m 13.0 1.298 15.5648 10.4352
BXD24/TyJ m 12.85 1.298 15.4148 10.2852
BXD24/TyJ-Cep290rd16/J m 11.55 1.298 14.1148 8.9852
BXD28/TyJ m 13.25 1.298 15.8148 10.6852
BXD29-Tlr4lps-2J/J m 12.55 1.298 15.1148 9.9852
BXD2/TyJ m 9.4 1.298 11.9648 6.8352
BXD33/TyJ m 9.7 1.298 12.2648 7.1352
BXD34/TyJ m 12.6 1.298 15.1648 10.0352
BXD40/TyJ m 9.7 1.298 12.2648 7.1352
BXD42/TyJ m 14.5 1.298 17.0648 11.9352
BXD5/TyJ m 11.85 1.298 14.4148 9.2852
BXD6/TyJ m 14.4 1.298 16.9648 11.8352
BXD8/TyJ m 12.5 1.298 15.0648 9.9352
BXD9/TyJ m 11.35 1.298 13.9148 8.7852
BXH19/TyJ m 10.65 1.298 13.2148 8.0852
BXH20/KccJ m 11.75 1.298 14.3148 9.1852
BXH2/TyJ m 9.5 1.298 12.0648 6.9352
BXH4/TyJ m 13.325 0.9178 15.1386 11.5114
BXH6/TyJ m 11.5 1.298 14.0648 8.9352
BXH7/TyJ m 6.8 1.298 9.3648 4.2352
BXH8/TyJ m 13.15 1.298 15.7148 10.5852
BXH9/TyJ m 11.95 1.298 14.5148 9.3852
C57BL/6J m 9.9 1.0598 11.9941 7.8059
C57L/J m 13.85 1.298 16.4148 11.2852
C58/J m 12.75 1.298 15.3148 10.1852
CAST/EiJ m 14.5 1.298 17.0648 11.9352
CE/J m 12.8 1.298 15.3648 10.2352
CXB11/HiAJ m 14.8125 0.649 16.0949 13.5301
CXB12/HiAJ m 16.275 0.649 17.5574 14.9926
CXB13/HiAJ m 16.575 0.649 17.8574 15.2926
CXB1/ByJ m 14.85 0.649 16.1324 13.5676
CXB2/ByJ m 15.6 0.7494 17.0808 14.1192
CXB3/ByJ m 14.5222 0.6119 15.7313 13.3132
CXB4/ByJ m 15.8375 0.649 17.1199 14.5551
CXB6/ByJ m 13.7429 0.6938 15.1138 12.3719
CXB7/ByJ m 16.4 0.6938 17.7709 15.0291
CXB8/HiAJ m 15.88 0.8209 17.5021 14.2579
CXB9/HiAJ m 14.0 0.6938 15.3709 12.6291
DBA/2J m 11.8 1.298 14.3648 9.2352
FVB/NJ m 10.15 1.298 12.7148 7.5852
KK/HlJ m 10.8 1.298 13.3648 8.2352
LG/J m 15.45 1.298 18.0148 12.8852
LP/J m 14.05 1.298 16.6148 11.4852
MA/MyJ m 14.2 1.298 16.7648 11.6352
NZW/LacJ m 12.15 1.298 14.7148 9.5852
PL/J m 11.0 1.298 13.5648 8.4352
RIIIS/J m 12.55 1.298 15.1148 9.9852
SEA/GnJ m 16.0 1.298 18.5648 13.4352
SJL/J m 11.95 1.298 14.5148 9.3852
SM/J m 15.95 1.298 18.5148 13.3852




  GWAS USING LINEAR MIXED MODELS