Project measure / variable:   HMDPpheno5   MCH

ID, description, units MPD:48961   MCH   mean RBC corpuscular hemoglobin (MCH)   [pg]  
Data set, strains HMDPpheno5   HMDP w/par   83 strains     sex: m     age: 16wks
Procedure complete blood count
Ontology mappings

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  STRAIN COMPARISON PLOT
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HMDPpheno5 - mean RBC corpuscular hemoglobin (MCH)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested83 strains
Mean of the strain means15.1   pg
Median of the strain means15.1   pg
SD of the strain means± 0.840
Coefficient of variation (CV)0.0556
Min–max range of strain means13.3   –   18.2   pg
Mean sample size per strain2.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 82 147.6197 1.8002 3.6167 < 0.0001
Residuals 150 74.6634 0.4978


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 15.3 0.141   2   0.1 0.00924 15.2, 15.4 0.23
AXB10/PgnJ m 15.8 0.141   2   0.1 0.00895 15.7, 15.9 0.83
AXB12/PgnJ m 15.8 0.707   2   0.5 0.0448 15.3, 16.3 0.83
AXB13/PgnJ m 14.4 0.0707   2   0.05 0.00489 14.4, 14.5 -0.84
AXB15/PgnJ m 15.6 0.283   2   0.2 0.0181 15.4, 15.8 0.59
AXB19b/PgnJ m 16.0 0.529   4 0.265 0.0331 15.3, 16.5 1.07
AXB19/PgnJ m 15.6 0.0707   2   0.05 0.00455 15.5, 15.6 0.59
AXB23/PgnJ m 15.1 0.212   2   0.15 0.0141 14.9, 15.2 -0.01
AXB2/PgnJ m 16.1 1.27   2   0.9 0.0791 15.2, 17.0 1.19
AXB4/PgnJ m 14.8 0.495   2   0.35 0.0336 14.4, 15.1 -0.36
AXB5/PgnJ m 15.9 0.283   2   0.2 0.0178 15.7, 16.1 0.95
AXB6/PgnJ m 14.6 0.354   2   0.25 0.0243 14.3, 14.8 -0.6
AXB8/PgnJ m 15.1 0.0   2   0.0 0.0 15.1, 15.1 -0.01
BALB/cJ m 15.4 0.0707   2   0.05 0.00458 15.4, 15.5 0.35
BTBR T+ Itpr3tf/J m 16.0 0.212   2   0.15 0.0133 15.8, 16.1 1.07
BXA11/PgnJ m 15.4 0.0707   2   0.05 0.00461 15.3, 15.4 0.35
BXA12/PgnJ m 14.8 0.354   2   0.25 0.0238 14.6, 15.1 -0.36
BXA13/PgnJ m 15.1 0.0   2   0.0 0.0 15.1, 15.1 -0.01
BXA14/PgnJ m 14.9 0.354   2   0.25 0.0236 14.7, 15.2 -0.24
BXA16/PgnJ m 14.9 0.611   3 0.353 0.0411 14.2, 15.4 -0.24
BXA24/PgnJ m 15.2 0.0707   2   0.05 0.00464 15.2, 15.3 0.11
BXA25/PgnJ m 15.0 1.98   2   1.4 0.132 13.6, 16.4 -0.12
BXA26/PgnJ m 15.4 0.354   2   0.25 0.0229 15.2, 15.7 0.35
BXA2/PgnJ m 14.7 0.212   2   0.15 0.0145 14.5, 14.8 -0.48
BXA4/PgnJ m 15.9 0.99   2   0.7 0.0623 15.2, 16.6 0.95
BXA7/PgnJ m 15.1 0.0707   2   0.05 0.00467 15.1, 15.2 -0.01
BXA8/PgnJ m 14.5 0.141   2   0.1 0.00975 14.4, 14.6 -0.72
BXD12/TyJ m 14.8 0.354   2   0.25 0.0238 14.6, 15.1 -0.36
BXD13/TyJ m 13.4 0.0707   2   0.05 0.0053 13.3, 13.4 -2.03
BXD14/TyJ m 15.1 0.707   2   0.5 0.0468 14.6, 15.6 -0.01
BXD15/TyJ m 13.3 0.0   2   0.0 0.0 13.3, 13.3 -2.15
BXD19/TyJ m 13.8 0.49   4 0.245 0.0355 13.2, 14.2 -1.55
BXD20/TyJ m 13.8 0.212   2   0.15 0.0154 13.6, 13.9 -1.55
BXD22/TyJ m 16.4 3.18   2   2.25 0.195 14.1, 18.6 1.54
BXD24/TyJ m 16.8 2.9   2   2.05 0.173 14.7, 18.8 2.02
BXD24/TyJ-Cep290rd16/J m 14.8 0.0707   2   0.05 0.00479 14.7, 14.8 -0.36
BXD28/TyJ m 13.9 0.212   2   0.15 0.0152 13.8, 14.1 -1.43
BXD29-Tlr4lps-2J/J m 14.4 0.0707   2   0.05 0.00489 14.4, 14.5 -0.84
BXD2/TyJ m 14.7 0.707   2   0.5 0.0481 14.2, 15.2 -0.48
BXD33/TyJ m 15.6 0.354   2   0.25 0.0227 15.3, 15.8 0.59
BXD34/TyJ m 14.7 0.707   2   0.5 0.0481 14.2, 15.2 -0.48
BXD40/TyJ m 16.1 2.47   2   1.75 0.154 14.3, 17.8 1.19
BXD42/TyJ m 13.7 0.283   2   0.2 0.0206 13.5, 13.9 -1.67
BXD5/TyJ m 14.1 0.0707   2   0.05 0.005 14.1, 14.2 -1.2
BXD6/TyJ m 14.4 0.0707   2   0.05 0.00489 14.4, 14.5 -0.84
BXD8/TyJ m 14.4 0.0707   2   0.05 0.00493 14.3, 14.4 -0.84
BXD9/TyJ m 14.5 0.141   2   0.1 0.00975 14.4, 14.6 -0.72
BXH19/TyJ m 15.5 0.0   2   0.0 0.0 15.5, 15.5 0.47
BXH20/KccJ m 16.2 0.141   2   0.1 0.00873 16.1, 16.3 1.3
BXH2/TyJ m 15.6 0.424   2   0.3 0.0272 15.3, 15.9 0.59
BXH4/TyJ m 16.0 0.616   4 0.308 0.0385 15.6, 16.9 1.07
BXH6/TyJ m 18.2 2.4   2   1.7 0.132 16.5, 19.9 3.69
BXH7/TyJ m 16.6 0.778   2   0.55 0.047 16.0, 17.1 1.78
BXH8/TyJ m 14.8 0.141   2   0.1 0.00956 14.7, 14.9 -0.36
BXH9/TyJ m 15.9 0.0707   2   0.05 0.00443 15.9, 16.0 0.95
C57BL/6J m 17.2 2.99   3 1.73 0.174 15.1, 20.6 2.5
C57L/J m 15.3 0.283   2   0.2 0.0185 15.1, 15.5 0.23
C58/J m 15.4 0.0707   2   0.05 0.00461 15.3, 15.4 0.35
CAST/EiJ m 14.3 0.141   2   0.1 0.00989 14.2, 14.4 -0.96
CE/J m 15.7 0.919   2   0.65 0.0587 15.0, 16.3 0.71
CXB11/HiAJ m 14.1 0.198   8 0.0701 0.0141 13.8, 14.3 -1.2
CXB12/HiAJ m 15.2 0.396   8 0.14 0.0261 14.7, 15.8 0.11
CXB13/HiAJ m 13.8 0.292   8 0.103 0.0211 13.6, 14.5 -1.55
CXB1/ByJ m 14.6 0.38   8 0.134 0.026 14.0, 15.0 -0.6
CXB2/ByJ m 15.1 0.532   6 0.217 0.0351 14.5, 16.1 -0.01
CXB3/ByJ m 15.1 0.605   9 0.202 0.0401 13.6, 15.6 -0.01
CXB4/ByJ m 14.5 0.267   8 0.0945 0.0185 14.1, 14.9 -0.72
CXB6/ByJ m 15.2 0.206   7 0.0778 0.0135 15.0, 15.6 0.11
CXB7/ByJ m 14.6 0.298   7 0.113 0.0204 14.2, 15.0 -0.6
CXB8/HiAJ m 14.4 0.444   5 0.198 0.0308 14.1, 15.0 -0.84
CXB9/HiAJ m 15.6 0.224   7 0.0845 0.0143 15.2, 15.8 0.59
DBA/2J m 13.6 0.354   2   0.25 0.0261 13.3, 13.8 -1.79
FVB/NJ m 14.9 0.212   2   0.15 0.0142 14.8, 15.1 -0.24
KK/HlJ m 15.1 0.141   2   0.1 0.00937 15.0, 15.2 -0.01
LG/J m 14.7 0.0   2   0.0 0.0 14.7, 14.7 -0.48
LP/J m 15.2 0.283   2   0.2 0.0186 15.0, 15.4 0.11
MA/MyJ m 14.8 0.354   2   0.25 0.024 14.5, 15.0 -0.36
NZW/LacJ m 15.1 0.495   2   0.35 0.0329 14.7, 15.4 -0.01
PL/J m 15.5 0.424   2   0.3 0.0274 15.2, 15.8 0.47
RIIIS/J m 14.8 0.0707   2   0.05 0.00479 14.7, 14.8 -0.36
SEA/GnJ m 14.9 0.636   2   0.45 0.0429 14.4, 15.3 -0.24
SJL/J m 15.1 0.0707   2   0.05 0.0047 15.0, 15.1 -0.01
SM/J m 16.0 0.141   2   0.1 0.00884 15.9, 16.1 1.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 15.3 0.4989 16.2857 14.3143
AXB10/PgnJ m 15.8 0.4989 16.7857 14.8143
AXB12/PgnJ m 15.8 0.4989 16.7857 14.8143
AXB13/PgnJ m 14.45 0.4989 15.4357 13.4643
AXB15/PgnJ m 15.6 0.4989 16.5857 14.6143
AXB19b/PgnJ m 16.0 0.3528 16.697 15.303
AXB19/PgnJ m 15.55 0.4989 16.5357 14.5643
AXB23/PgnJ m 15.05 0.4989 16.0357 14.0643
AXB2/PgnJ m 16.1 0.4989 17.0857 15.1143
AXB4/PgnJ m 14.75 0.4989 15.7357 13.7643
AXB5/PgnJ m 15.9 0.4989 16.8857 14.9143
AXB6/PgnJ m 14.55 0.4989 15.5357 13.5643
AXB8/PgnJ m 15.1 0.4989 16.0857 14.1143
BALB/cJ m 15.45 0.4989 16.4357 14.4643
BTBR T+ Itpr3tf/J m 15.95 0.4989 16.9357 14.9643
BXA11/PgnJ m 15.35 0.4989 16.3357 14.3643
BXA12/PgnJ m 14.85 0.4989 15.8357 13.8643
BXA13/PgnJ m 15.1 0.4989 16.0857 14.1143
BXA14/PgnJ m 14.95 0.4989 15.9357 13.9643
BXA16/PgnJ m 14.8667 0.4073 15.6715 14.0618
BXA24/PgnJ m 15.25 0.4989 16.2357 14.2643
BXA25/PgnJ m 15.0 0.4989 15.9857 14.0143
BXA26/PgnJ m 15.45 0.4989 16.4357 14.4643
BXA2/PgnJ m 14.65 0.4989 15.6357 13.6643
BXA4/PgnJ m 15.9 0.4989 16.8857 14.9143
BXA7/PgnJ m 15.15 0.4989 16.1357 14.1643
BXA8/PgnJ m 14.5 0.4989 15.4857 13.5143
BXD12/TyJ m 14.85 0.4989 15.8357 13.8643
BXD13/TyJ m 13.35 0.4989 14.3357 12.3643
BXD14/TyJ m 15.1 0.4989 16.0857 14.1143
BXD15/TyJ m 13.3 0.4989 14.2857 12.3143
BXD19/TyJ m 13.8 0.3528 14.497 13.103
BXD20/TyJ m 13.75 0.4989 14.7357 12.7643
BXD22/TyJ m 16.35 0.4989 17.3357 15.3643
BXD24/TyJ m 16.75 0.4989 17.7357 15.7643
BXD24/TyJ-Cep290rd16/J m 14.75 0.4989 15.7357 13.7643
BXD28/TyJ m 13.95 0.4989 14.9357 12.9643
BXD29-Tlr4lps-2J/J m 14.45 0.4989 15.4357 13.4643
BXD2/TyJ m 14.7 0.4989 15.6857 13.7143
BXD33/TyJ m 15.55 0.4989 16.5357 14.5643
BXD34/TyJ m 14.7 0.4989 15.6857 13.7143
BXD40/TyJ m 16.05 0.4989 17.0357 15.0643
BXD42/TyJ m 13.7 0.4989 14.6857 12.7143
BXD5/TyJ m 14.15 0.4989 15.1357 13.1643
BXD6/TyJ m 14.45 0.4989 15.4357 13.4643
BXD8/TyJ m 14.35 0.4989 15.3357 13.3643
BXD9/TyJ m 14.5 0.4989 15.4857 13.5143
BXH19/TyJ m 15.5 0.4989 16.4857 14.5143
BXH20/KccJ m 16.2 0.4989 17.1857 15.2143
BXH2/TyJ m 15.6 0.4989 16.5857 14.6143
BXH4/TyJ m 16.0 0.3528 16.697 15.303
BXH6/TyJ m 18.2 0.4989 19.1857 17.2143
BXH7/TyJ m 16.55 0.4989 17.5357 15.5643
BXH8/TyJ m 14.8 0.4989 15.7857 13.8143
BXH9/TyJ m 15.95 0.4989 16.9357 14.9643
C57BL/6J m 17.1667 0.4073 17.9715 16.3618
C57L/J m 15.3 0.4989 16.2857 14.3143
C58/J m 15.35 0.4989 16.3357 14.3643
CAST/EiJ m 14.3 0.4989 15.2857 13.3143
CE/J m 15.65 0.4989 16.6357 14.6643
CXB11/HiAJ m 14.075 0.2494 14.5679 13.5821
CXB12/HiAJ m 15.1625 0.2494 15.6554 14.6696
CXB13/HiAJ m 13.8375 0.2494 14.3304 13.3446
CXB1/ByJ m 14.6125 0.2494 15.1054 14.1196
CXB2/ByJ m 15.1333 0.288 15.7024 14.5642
CXB3/ByJ m 15.0889 0.2352 15.5536 14.6242
CXB4/ByJ m 14.45 0.2494 14.9429 13.9571
CXB6/ByJ m 15.2286 0.2667 15.7555 14.7017
CXB7/ByJ m 14.6286 0.2667 15.1555 14.1017
CXB8/HiAJ m 14.42 0.3155 15.0434 13.7966
CXB9/HiAJ m 15.6 0.2667 16.1269 15.0731
DBA/2J m 13.55 0.4989 14.5357 12.5643
FVB/NJ m 14.95 0.4989 15.9357 13.9643
KK/HlJ m 15.1 0.4989 16.0857 14.1143
LG/J m 14.7 0.4989 15.6857 13.7143
LP/J m 15.2 0.4989 16.1857 14.2143
MA/MyJ m 14.75 0.4989 15.7357 13.7643
NZW/LacJ m 15.05 0.4989 16.0357 14.0643
PL/J m 15.5 0.4989 16.4857 14.5143
RIIIS/J m 14.75 0.4989 15.7357 13.7643
SEA/GnJ m 14.85 0.4989 15.8357 13.8643
SJL/J m 15.05 0.4989 16.0357 14.0643
SM/J m 16.0 0.4989 16.9857 15.0143




  GWAS USING LINEAR MIXED MODELS