Project measure / variable:   HMDPpheno5   MCV

ID, description, units MPD:48949   MCV   mean RBC corpuscular volume (MCV)   [fL]  
Data set, strains HMDPpheno5   HMDP w/par   83 strains     sex: m     age: 16wks
Procedure complete blood count
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  STRAIN COMPARISON PLOT
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HMDPpheno5 - mean RBC corpuscular volume (MCV)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested83 strains
Mean of the strain means44.4   fL
Median of the strain means44.0   fL
SD of the strain means± 3.86
Coefficient of variation (CV)0.0868
Min–max range of strain means38.0   –   52.0   fL
Mean sample size per strain2.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 82 3382.5567 41.2507 41.5331 < 0.0001
Residuals 150 148.9802 0.9932


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 47.8 0.0707   2   0.05 0.00148 47.8, 47.9 0.87
AXB10/PgnJ m 44.1 0.354   2   0.25 0.00801 43.9, 44.4 -0.09
AXB12/PgnJ m 48.7 0.424   2   0.3 0.00871 48.4, 49.0 1.1
AXB13/PgnJ m 46.3 0.283   2   0.2 0.00611 46.1, 46.5 0.48
AXB15/PgnJ m 41.3 0.141   2   0.1 0.00342 41.2, 41.4 -0.81
AXB19b/PgnJ m 42.5 1.02   4 0.512 0.0241 41.4, 43.4 -0.5
AXB19/PgnJ m 42.5 0.0707   2   0.05 0.00166 42.5, 42.6 -0.5
AXB23/PgnJ m 47.8 1.41   2   1.0 0.0296 46.8, 48.8 0.87
AXB2/PgnJ m 47.3 1.34   2   0.95 0.0284 46.4, 48.3 0.74
AXB4/PgnJ m 38.7 0.141   2   0.1 0.00365 38.6, 38.8 -1.49
AXB5/PgnJ m 52.0 0.0707   2   0.05 0.00136 51.9, 52.0 1.96
AXB6/PgnJ m 46.8 0.0707   2   0.05 0.00151 46.8, 46.9 0.61
AXB8/PgnJ m 41.1 0.283   2   0.2 0.00688 40.9, 41.3 -0.87
BALB/cJ m 50.1 0.212   2   0.15 0.00423 50.0, 50.3 1.47
BTBR T+ Itpr3tf/J m 51.5 0.636   2   0.45 0.0123 51.1, 52.0 1.83
BXA11/PgnJ m 49.5 0.636   2   0.45 0.0128 49.1, 50.0 1.31
BXA12/PgnJ m 41.8 0.778   2   0.55 0.0186 41.3, 42.4 -0.69
BXA13/PgnJ m 48.0 0.0707   2   0.05 0.00147 48.0, 48.1 0.92
BXA14/PgnJ m 47.5 1.27   2   0.9 0.0268 46.6, 48.4 0.79
BXA16/PgnJ m 38.9 1.53   3 0.884 0.0393 38.0, 40.7 -1.44
BXA24/PgnJ m 42.9 0.212   2   0.15 0.00495 42.7, 43.0 -0.4
BXA25/PgnJ m 38.6 0.141   2   0.1 0.00366 38.5, 38.7 -1.51
BXA26/PgnJ m 50.5 0.212   2   0.15 0.0042 50.3, 50.6 1.57
BXA2/PgnJ m 40.9 0.495   2   0.35 0.0121 40.5, 41.2 -0.92
BXA4/PgnJ m 48.0 0.636   2   0.45 0.0132 47.6, 48.5 0.92
BXA7/PgnJ m 46.4 0.141   2   0.1 0.00305 46.3, 46.5 0.51
BXA8/PgnJ m 40.4 0.495   2   0.35 0.0123 40.0, 40.7 -1.05
BXD12/TyJ m 48.9 0.424   2   0.3 0.00868 48.6, 49.2 1.16
BXD13/TyJ m 41.6 0.99   2   0.7 0.0238 40.9, 42.3 -0.74
BXD14/TyJ m 45.7 1.27   2   0.9 0.0279 44.8, 46.6 0.33
BXD15/TyJ m 42.0 0.141   2   0.1 0.00337 41.9, 42.1 -0.63
BXD19/TyJ m 41.9 4.05   4 2.03 0.0968 38.4, 45.8 -0.66
BXD20/TyJ m 38.2 0.0   2   0.0 0.0 38.2, 38.2 -1.62
BXD22/TyJ m 38.3 1.98   2   1.4 0.0517 36.9, 39.7 -1.59
BXD24/TyJ m 44.8 0.424   2   0.3 0.00947 44.5, 45.1 0.09
BXD24/TyJ-Cep290rd16/J m 45.2 0.495   2   0.35 0.0109 44.9, 45.6 0.2
BXD28/TyJ m 44.0 0.0707   2   0.05 0.00161 43.9, 44.0 -0.11
BXD29-Tlr4lps-2J/J m 40.0 0.0707   2   0.05 0.00177 39.9, 40.0 -1.15
BXD2/TyJ m 38.0 1.2   2   0.85 0.0317 37.1, 38.8 -1.67
BXD33/TyJ m 42.7 0.566   2   0.4 0.0132 42.3, 43.1 -0.45
BXD34/TyJ m 47.2 0.0   2   0.0 0.0 47.2, 47.2 0.72
BXD40/TyJ m 39.4 0.141   2   0.1 0.00359 39.3, 39.5 -1.31
BXD42/TyJ m 43.7 0.849   2   0.6 0.0194 43.1, 44.3 -0.19
BXD5/TyJ m 44.0 0.99   2   0.7 0.0225 43.3, 44.7 -0.11
BXD6/TyJ m 39.8 0.354   2   0.25 0.00889 39.5, 40.0 -1.2
BXD8/TyJ m 39.5 0.0707   2   0.05 0.00179 39.5, 39.6 -1.28
BXD9/TyJ m 46.6 0.354   2   0.25 0.00758 46.4, 46.9 0.56
BXH19/TyJ m 42.3 0.566   2   0.4 0.0134 41.9, 42.7 -0.56
BXH20/KccJ m 44.0 0.0707   2   0.05 0.00161 43.9, 44.0 -0.11
BXH2/TyJ m 42.9 1.27   2   0.9 0.0297 42.0, 43.8 -0.4
BXH4/TyJ m 51.0 0.842   4 0.421 0.0165 50.2, 52.2 1.7
BXH6/TyJ m 51.2 0.778   2   0.55 0.0152 50.6, 51.7 1.75
BXH7/TyJ m 42.5 0.495   2   0.35 0.0116 42.2, 42.9 -0.5
BXH8/TyJ m 48.3 0.0707   2   0.05 0.00146 48.3, 48.4 1.0
BXH9/TyJ m 50.4 0.354   2   0.25 0.00702 50.1, 50.6 1.54
C57BL/6J m 41.7 0.907   3 0.524 0.0218 40.7, 42.5 -0.71
C57L/J m 43.4 0.141   2   0.1 0.00326 43.3, 43.5 -0.27
C58/J m 43.5 0.99   2   0.7 0.0228 42.8, 44.2 -0.24
CAST/EiJ m 49.9 1.2   2   0.85 0.0241 49.0, 50.7 1.42
CE/J m 41.4 0.0   2   0.0 0.0 41.4, 41.4 -0.79
CXB11/HiAJ m 39.7 0.385   8 0.136 0.00969 39.1, 40.2 -1.23
CXB12/HiAJ m 50.0 0.691   8 0.244 0.0138 49.1, 51.0 1.44
CXB13/HiAJ m 45.4 0.736   8 0.26 0.0162 44.3, 46.4 0.25
CXB1/ByJ m 39.9 0.463   8 0.164 0.0116 39.2, 40.7 -1.18
CXB2/ByJ m 41.9 1.32   6 0.54 0.0316 40.4, 44.3 -0.66
CXB3/ByJ m 48.8 2.02   9 0.673 0.0414 43.9, 50.8 1.13
CXB4/ByJ m 41.1 0.219   8 0.0773 0.00532 40.9, 41.5 -0.87
CXB6/ByJ m 42.4 0.35   7 0.132 0.00825 41.7, 42.8 -0.53
CXB7/ByJ m 40.2 0.522   7 0.197 0.013 39.5, 40.9 -1.1
CXB8/HiAJ m 46.6 0.867   5 0.388 0.0186 46.1, 48.1 0.56
CXB9/HiAJ m 44.6 0.68   7 0.257 0.0152 43.5, 45.7 0.04
DBA/2J m 44.1 0.212   2   0.15 0.0048 44.0, 44.3 -0.09
FVB/NJ m 48.6 0.283   2   0.2 0.00582 48.4, 48.8 1.08
KK/HlJ m 39.2 0.636   2   0.45 0.0162 38.8, 39.7 -1.36
LG/J m 47.0 0.707   2   0.5 0.015 46.5, 47.5 0.66
LP/J m 50.4 0.0   2   0.0 0.0 50.4, 50.4 1.54
MA/MyJ m 41.0 0.707   2   0.5 0.0172 40.5, 41.5 -0.89
NZW/LacJ m 47.8 0.778   2   0.55 0.0163 47.2, 48.3 0.87
PL/J m 47.1 0.495   2   0.35 0.0105 46.8, 47.5 0.69
RIIIS/J m 41.2 0.283   2   0.2 0.00687 41.0, 41.4 -0.84
SEA/GnJ m 48.2 0.636   2   0.45 0.0132 47.7, 48.6 0.97
SJL/J m 41.6 0.495   2   0.35 0.0119 41.3, 42.0 -0.74
SM/J m 46.0 0.849   2   0.6 0.0184 45.4, 46.6 0.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 47.85 0.7047 49.2424 46.4576
AXB10/PgnJ m 44.15 0.7047 45.5424 42.7576
AXB12/PgnJ m 48.7 0.7047 50.0924 47.3076
AXB13/PgnJ m 46.3 0.7047 47.6924 44.9076
AXB15/PgnJ m 41.3 0.7047 42.6924 39.9076
AXB19b/PgnJ m 42.475 0.4983 43.4596 41.4904
AXB19/PgnJ m 42.55 0.7047 43.9424 41.1576
AXB23/PgnJ m 47.8 0.7047 49.1924 46.4076
AXB2/PgnJ m 47.35 0.7047 48.7424 45.9576
AXB4/PgnJ m 38.7 0.7047 40.0924 37.3076
AXB5/PgnJ m 51.95 0.7047 53.3424 50.5576
AXB6/PgnJ m 46.85 0.7047 48.2424 45.4576
AXB8/PgnJ m 41.1 0.7047 42.4924 39.7076
BALB/cJ m 50.15 0.7047 51.5424 48.7576
BTBR T+ Itpr3tf/J m 51.55 0.7047 52.9424 50.1576
BXA11/PgnJ m 49.55 0.7047 50.9424 48.1576
BXA12/PgnJ m 41.85 0.7047 43.2424 40.4576
BXA13/PgnJ m 48.05 0.7047 49.4424 46.6576
BXA14/PgnJ m 47.5 0.7047 48.8924 46.1076
BXA16/PgnJ m 38.9333 0.5754 40.0702 37.7964
BXA24/PgnJ m 42.85 0.7047 44.2424 41.4576
BXA25/PgnJ m 38.6 0.7047 39.9924 37.2076
BXA26/PgnJ m 50.45 0.7047 51.8424 49.0576
BXA2/PgnJ m 40.85 0.7047 42.2424 39.4576
BXA4/PgnJ m 48.05 0.7047 49.4424 46.6576
BXA7/PgnJ m 46.4 0.7047 47.7924 45.0076
BXA8/PgnJ m 40.35 0.7047 41.7424 38.9576
BXD12/TyJ m 48.9 0.7047 50.2924 47.5076
BXD13/TyJ m 41.6 0.7047 42.9924 40.2076
BXD14/TyJ m 45.7 0.7047 47.0924 44.3076
BXD15/TyJ m 42.0 0.7047 43.3924 40.6076
BXD19/TyJ m 41.9 0.4983 42.8846 40.9154
BXD20/TyJ m 38.2 0.7047 39.5924 36.8076
BXD22/TyJ m 38.3 0.7047 39.6924 36.9076
BXD24/TyJ m 44.8 0.7047 46.1924 43.4076
BXD24/TyJ-Cep290rd16/J m 45.25 0.7047 46.6424 43.8576
BXD28/TyJ m 43.95 0.7047 45.3424 42.5576
BXD29-Tlr4lps-2J/J m 39.95 0.7047 41.3424 38.5576
BXD2/TyJ m 37.95 0.7047 39.3424 36.5576
BXD33/TyJ m 42.7 0.7047 44.0924 41.3076
BXD34/TyJ m 47.2 0.7047 48.5924 45.8076
BXD40/TyJ m 39.4 0.7047 40.7924 38.0076
BXD42/TyJ m 43.7 0.7047 45.0924 42.3076
BXD5/TyJ m 44.0 0.7047 45.3924 42.6076
BXD6/TyJ m 39.75 0.7047 41.1424 38.3576
BXD8/TyJ m 39.55 0.7047 40.9424 38.1576
BXD9/TyJ m 46.65 0.7047 48.0424 45.2576
BXH19/TyJ m 42.3 0.7047 43.6924 40.9076
BXH20/KccJ m 43.95 0.7047 45.3424 42.5576
BXH2/TyJ m 42.9 0.7047 44.2924 41.5076
BXH4/TyJ m 51.025 0.4983 52.0096 50.0404
BXH6/TyJ m 51.15 0.7047 52.5424 49.7576
BXH7/TyJ m 42.55 0.7047 43.9424 41.1576
BXH8/TyJ m 48.35 0.7047 49.7424 46.9576
BXH9/TyJ m 50.35 0.7047 51.7424 48.9576
C57BL/6J m 41.6667 0.5754 42.8036 40.5298
C57L/J m 43.4 0.7047 44.7924 42.0076
C58/J m 43.5 0.7047 44.8924 42.1076
CAST/EiJ m 49.85 0.7047 51.2424 48.4576
CE/J m 41.4 0.7047 42.7924 40.0076
CXB11/HiAJ m 39.675 0.3523 40.3712 38.9788
CXB12/HiAJ m 50.0375 0.3523 50.7337 49.3413
CXB13/HiAJ m 45.375 0.3523 46.0712 44.6788
CXB1/ByJ m 39.9 0.3523 40.5962 39.2038
CXB2/ByJ m 41.9333 0.4069 42.7372 41.1294
CXB3/ByJ m 48.7889 0.3322 49.4453 48.1325
CXB4/ByJ m 41.125 0.3523 41.8212 40.4288
CXB6/ByJ m 42.4286 0.3767 43.1729 41.6843
CXB7/ByJ m 40.1714 0.3767 40.9157 39.4271
CXB8/HiAJ m 46.62 0.4457 47.5006 45.7394
CXB9/HiAJ m 44.6286 0.3767 45.3729 43.8843
DBA/2J m 44.15 0.7047 45.5424 42.7576
FVB/NJ m 48.6 0.7047 49.9924 47.2076
KK/HlJ m 39.25 0.7047 40.6424 37.8576
LG/J m 47.0 0.7047 48.3924 45.6076
LP/J m 50.4 0.7047 51.7924 49.0076
MA/MyJ m 41.0 0.7047 42.3924 39.6076
NZW/LacJ m 47.75 0.7047 49.1424 46.3576
PL/J m 47.15 0.7047 48.5424 45.7576
RIIIS/J m 41.2 0.7047 42.5924 39.8076
SEA/GnJ m 48.15 0.7047 49.5424 46.7576
SJL/J m 41.65 0.7047 43.0424 40.2576
SM/J m 46.0 0.7047 47.3924 44.6076




  GWAS USING LINEAR MIXED MODELS