Project measure / variable:   HMDPpheno5   pct_MONO

ID, description, units MPD:48925   pct_MONO   monocyte differential (MONO; percentage of viable WBC)   [%]  
Data set, strains HMDPpheno5   HMDP w/par   79 strains     sex: m     age: 16wks
Procedure complete blood count
Ontology mappings

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  STRAIN COMPARISON PLOT
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HMDPpheno5 - monocyte differential (MONO; percentage of viable WBC)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested79 strains
Mean of the strain means6.94   %
Median of the strain means6.80   %
SD of the strain means± 1.53
Coefficient of variation (CV)0.220
Min–max range of strain means3.70   –   11.9   %
Mean sample size per strain2.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 77 605.5979 7.8649 3.3137 < 0.0001
Residuals 142 337.032 2.3735


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 9.5 0.141   2   0.1 0.0149 9.4, 9.6 1.68
AXB10/PgnJ m 5.9 0.566   2   0.4 0.0959 5.5, 6.3 -0.68
AXB12/PgnJ m 5.75 1.34   2   0.95 0.234 4.8, 6.7 -0.78
AXB13/PgnJ m 4.6 1.84   2   1.3 0.4 3.3, 5.9 -1.53
AXB15/PgnJ m 5.95 0.212   2   0.15 0.0357 5.8, 6.1 -0.65
AXB19b/PgnJ m 3.7 0.483   4 0.242 0.131 3.3, 4.4 -2.12
AXB19/PgnJ m 5.0 0.141   2   0.1 0.0283 4.9, 5.1 -1.27
AXB23/PgnJ m 5.3 0.283   2   0.2 0.0534 5.1, 5.5 -1.07
AXB2/PgnJ m 6.1 3.11   2   2.2 0.51 3.9, 8.3 -0.55
AXB5/PgnJ m 6.85 0.495   2   0.35 0.0723 6.5, 7.2 -0.06
AXB6/PgnJ m 5.35 0.778   2   0.55 0.145 4.8, 5.9 -1.04
AXB8/PgnJ m 6.4 2.55   2   1.8 0.398 4.6, 8.2 -0.35
BALB/cJ m 5.2 0.566   2   0.4 0.109 4.8, 5.6 -1.14
BTBR T+ Itpr3tf/J m 6.6 0.566   2   0.4 0.0857 6.2, 7.0 -0.22
BXA11/PgnJ m 5.6 1.56   2   1.1 0.278 4.5, 6.7 -0.88
BXA12/PgnJ m 4.6 0.707   2   0.5 0.154 4.1, 5.1 -1.53
BXA13/PgnJ m 5.85 2.33   2   1.65 0.399 4.2, 7.5 -0.71
BXA14/PgnJ m 7.05 1.63   2   1.15 0.231 5.9, 8.2 0.07
BXA16/PgnJ m 5.9 0.656   3 0.379 0.111 5.3, 6.6 -0.68
BXA24/PgnJ m 6.15 0.919   2   0.65 0.149 5.5, 6.8 -0.52
BXA25/PgnJ m 8.05 0.354   2   0.25 0.0439 7.8, 8.3 0.73
BXA26/PgnJ m 4.65 1.63   2   1.15 0.35 3.5, 5.8 -1.5
BXA2/PgnJ m 5.85 0.212   2   0.15 0.0363 5.7, 6.0 -0.71
BXA4/PgnJ m 5.65 1.06   2   0.75 0.188 4.9, 6.4 -0.84
BXA7/PgnJ m 5.65 1.34   2   0.95 0.238 4.7, 6.6 -0.84
BXA8/PgnJ m 7.75 0.0707   2   0.05 0.00912 7.7, 7.8 0.53
BXD12/TyJ m 7.45 0.0707   2   0.05 0.00949 7.4, 7.5 0.34
BXD13/TyJ m 6.25 0.212   2   0.15 0.0339 6.1, 6.4 -0.45
BXD14/TyJ m 6.45 1.06   2   0.75 0.164 5.7, 7.2 -0.32
BXD15/TyJ m 6.8 0.283   2   0.2 0.0416 6.6, 7.0 -0.09
BXD19/TyJ m 7.22 0.519   4 0.259 0.0718 6.6, 7.7 0.18
BXD22/TyJ m 5.6 1.56   2   1.1 0.278 4.5, 6.7 -0.88
BXD24/TyJ m 7.3 0.424   2   0.3 0.0581 7.0, 7.6 0.24
BXD24/TyJ-Cep290rd16/J m 8.35 0.354   2   0.25 0.0423 8.1, 8.6 0.92
BXD28/TyJ m 5.5 0.141   2   0.1 0.0257 5.4, 5.6 -0.94
BXD29-Tlr4lps-2J/J m 7.15 0.636   2   0.45 0.089 6.7, 7.6 0.14
BXD2/TyJ m 11.0 0.424   2   0.3 0.0386 10.7, 11.3 2.66
BXD33/TyJ m 6.5 0.424   2   0.3 0.0653 6.2, 6.8 -0.29
BXD34/TyJ m 8.65 1.2   2   0.85 0.139 7.8, 9.5 1.12
BXD40/TyJ m 6.15 1.2   2   0.85 0.195 5.3, 7.0 -0.52
BXD42/TyJ m 7.1 1.41   2   1.0 0.199 6.1, 8.1 0.11
BXD5/TyJ m 6.7 0.707   2   0.5 0.106 6.2, 7.2 -0.16
BXD6/TyJ m 6.05 0.354   2   0.25 0.0584 5.8, 6.3 -0.58
BXD9/TyJ m 5.95 0.636   2   0.45 0.107 5.5, 6.4 -0.65
BXH19/TyJ m 7.0 1.84   2   1.3 0.263 5.7, 8.3 0.04
BXH20/KccJ m 6.85 1.06   2   0.75 0.155 6.1, 7.6 -0.06
BXH2/TyJ m 7.5 2.55   2   1.8 0.339 5.7, 9.3 0.37
BXH4/TyJ m 9.65 2.33   2   1.65 0.242 8.0, 11.3 1.78
BXH6/TyJ m 7.2 0.849   2   0.6 0.118 6.6, 7.8 0.17
BXH7/TyJ m 5.85 0.212   2   0.15 0.0363 5.7, 6.0 -0.71
BXH8/TyJ m 6.2 0.566   2   0.4 0.0912 5.8, 6.6 -0.48
BXH9/TyJ m 6.95 1.06   2   0.75 0.153 6.2, 7.7 0.01
C57BL/6J m 7.2 1.68   3 0.971 0.234 5.9, 9.1 0.17
C57L/J m 6.5 1.13   2   0.8 0.174 5.7, 7.3 -0.29
C58/J m 5.9 0.849   2   0.6 0.144 5.3, 6.5 -0.68
CAST/EiJ m 9.85 7.42   2   5.25 0.754 4.6, 15.1 1.91
CE/J m 6.8 0.566   2   0.4 0.0832 6.4, 7.2 -0.09
CXB11/HiAJ m 8.49 1.0   8 0.355 0.118 7.0, 10.3 1.02
CXB12/HiAJ m 7.64 1.27   8 0.451 0.167 6.4, 10.3 0.46
CXB13/HiAJ m 7.64 1.59   8 0.561 0.208 4.9, 9.8 0.46
CXB1/ByJ m 7.81 0.919   8 0.325 0.118 6.5, 9.0 0.57
CXB2/ByJ m 7.38 2.39   6 0.976 0.324 4.5, 11.7 0.29
CXB3/ByJ m 7.1 0.763   9 0.254 0.107 5.9, 8.7 0.11
CXB4/ByJ m 8.93 1.5   8 0.532 0.169 5.9, 10.9 1.3
CXB6/ByJ m 10.6 1.86   7 0.702 0.175 8.0, 13.3 2.4
CXB7/ByJ m 11.9 2.48   7 0.936 0.208 8.9, 15.4 3.25
CXB8/HiAJ m 9.1 2.42   5 1.08 0.266 6.6, 11.9 1.42
CXB9/HiAJ m 6.47 1.07   6 0.439 0.166 5.3, 8.2 -0.31
DBA/2J m 6.85 0.0707   2   0.05 0.0103 6.8, 6.9 -0.06
FVB/NJ m 8.2 0.424   2   0.3 0.0517 7.9, 8.5 0.83
KK/HlJ m 10.1 2.62   2   1.85 0.26 8.2, 11.9 2.07
LG/J m 8.45 3.32   2   2.35 0.393 6.1, 10.8 0.99
LP/J m 6.95 0.778   2   0.55 0.112 6.4, 7.5 0.01
MA/MyJ m 7.65 0.495   2   0.35 0.0647 7.3, 8.0 0.47
NZW/LacJ m 5.5 0.0   1   0.0 0.0 5.5, 5.5 -0.94
PL/J m 7.5 1.13   2   0.8 0.151 6.7, 8.3 0.37
RIIIS/J m 7.7 0.424   2   0.3 0.0551 7.4, 8.0 0.5
SEA/GnJ m 5.05 0.212   2   0.15 0.042 4.9, 5.2 -1.24
SJL/J m 6.55 1.77   2   1.25 0.27 5.3, 7.8 -0.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 9.5 1.0894 11.6535 7.3465
AXB10/PgnJ m 5.9 1.0894 8.0535 3.7465
AXB12/PgnJ m 5.75 1.0894 7.9035 3.5965
AXB13/PgnJ m 4.6 1.0894 6.7535 2.4465
AXB15/PgnJ m 5.95 1.0894 8.1035 3.7965
AXB19b/PgnJ m 3.7 0.7703 5.2227 2.1773
AXB19/PgnJ m 5.0 1.0894 7.1535 2.8465
AXB23/PgnJ m 5.3 1.0894 7.4535 3.1465
AXB2/PgnJ m 6.1 1.0894 8.2535 3.9465
AXB5/PgnJ m 6.85 1.0894 9.0035 4.6965
AXB6/PgnJ m 5.35 1.0894 7.5035 3.1965
AXB8/PgnJ m 6.4 1.0894 8.5535 4.2465
BALB/cJ m 5.2 1.0894 7.3535 3.0465
BTBR T+ Itpr3tf/J m 6.6 1.0894 8.7535 4.4465
BXA11/PgnJ m 5.6 1.0894 7.7535 3.4465
BXA12/PgnJ m 4.6 1.0894 6.7535 2.4465
BXA13/PgnJ m 5.85 1.0894 8.0035 3.6965
BXA14/PgnJ m 7.05 1.0894 9.2035 4.8965
BXA16/PgnJ m 5.9 0.8895 7.6583 4.1417
BXA24/PgnJ m 6.15 1.0894 8.3035 3.9965
BXA25/PgnJ m 8.05 1.0894 10.2035 5.8965
BXA26/PgnJ m 4.65 1.0894 6.8035 2.4965
BXA2/PgnJ m 5.85 1.0894 8.0035 3.6965
BXA4/PgnJ m 5.65 1.0894 7.8035 3.4965
BXA7/PgnJ m 5.65 1.0894 7.8035 3.4965
BXA8/PgnJ m 7.75 1.0894 9.9035 5.5965
BXD12/TyJ m 7.45 1.0894 9.6035 5.2965
BXD13/TyJ m 6.25 1.0894 8.4035 4.0965
BXD14/TyJ m 6.45 1.0894 8.6035 4.2965
BXD15/TyJ m 6.8 1.0894 8.9535 4.6465
BXD19/TyJ m 7.225 0.7703 8.7477 5.7023
BXD22/TyJ m 5.6 1.0894 7.7535 3.4465
BXD24/TyJ m 7.3 1.0894 9.4535 5.1465
BXD24/TyJ-Cep290rd16/J m 8.35 1.0894 10.5035 6.1965
BXD28/TyJ m 5.5 1.0894 7.6535 3.3465
BXD29-Tlr4lps-2J/J m 7.15 1.0894 9.3035 4.9965
BXD2/TyJ m 11.0 1.0894 13.1535 8.8465
BXD33/TyJ m 6.5 1.0894 8.6535 4.3465
BXD34/TyJ m 8.65 1.0894 10.8035 6.4965
BXD40/TyJ m 6.15 1.0894 8.3035 3.9965
BXD42/TyJ m 7.1 1.0894 9.2535 4.9465
BXD5/TyJ m 6.7 1.0894 8.8535 4.5465
BXD6/TyJ m 6.05 1.0894 8.2035 3.8965
BXD9/TyJ m 5.95 1.0894 8.1035 3.7965
BXH19/TyJ m 7.0 1.0894 9.1535 4.8465
BXH20/KccJ m 6.85 1.0894 9.0035 4.6965
BXH2/TyJ m 7.5 1.0894 9.6535 5.3465
BXH4/TyJ m 9.65 1.0894 11.8035 7.4965
BXH6/TyJ m 7.2 1.0894 9.3535 5.0465
BXH7/TyJ m 5.85 1.0894 8.0035 3.6965
BXH8/TyJ m 6.2 1.0894 8.3535 4.0465
BXH9/TyJ m 6.95 1.0894 9.1035 4.7965
C57BL/6J m 7.2 0.8895 8.9583 5.4417
C57L/J m 6.5 1.0894 8.6535 4.3465
C58/J m 5.9 1.0894 8.0535 3.7465
CAST/EiJ m 9.85 1.0894 12.0035 7.6965
CE/J m 6.8 1.0894 8.9535 4.6465
CXB11/HiAJ m 8.4875 0.5447 9.5642 7.4108
CXB12/HiAJ m 7.6375 0.5447 8.7142 6.5608
CXB13/HiAJ m 7.6375 0.5447 8.7142 6.5608
CXB1/ByJ m 7.8125 0.5447 8.8892 6.7358
CXB2/ByJ m 7.3833 0.6289 8.6266 6.14
CXB3/ByJ m 7.1 0.5135 8.1152 6.0848
CXB4/ByJ m 8.925 0.5447 10.0017 7.8483
CXB6/ByJ m 10.6286 0.5823 11.7797 9.4775
CXB7/ByJ m 11.8857 0.5823 13.0368 10.7346
CXB8/HiAJ m 9.1 0.689 10.462 7.738
CXB9/HiAJ m 6.4667 0.6289 7.71 5.2234
DBA/2J m 6.85 1.0894 9.0035 4.6965
FVB/NJ m 8.2 1.0894 10.3535 6.0465
KK/HlJ m 10.05 1.0894 12.2035 7.8965
LG/J m 8.45 1.0894 10.6035 6.2965
LP/J m 6.95 1.0894 9.1035 4.7965
MA/MyJ m 7.65 1.0894 9.8035 5.4965
PL/J m 7.5 1.0894 9.6535 5.3465
RIIIS/J m 7.7 1.0894 9.8535 5.5465
SEA/GnJ m 5.05 1.0894 7.2035 2.8965
SJL/J m 6.55 1.0894 8.7035 4.3965




  GWAS USING LINEAR MIXED MODELS